Miyakogusa Predicted Gene

Lj0g3v0311159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311159.1 tr|Q10L30|Q10L30_ORYSJ
Endonuclease/Exonuclease/phosphatase family protein, expressed
OS=Oryza sativ,76.92,0.00001, ,CUFF.20989.1
         (34 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02850.1                                                        52   1e-07
Glyma02g16950.1                                                        52   1e-07
Glyma03g30600.1                                                        52   2e-07
Glyma15g10720.1                                                        51   3e-07
Glyma19g33500.1                                                        51   3e-07
Glyma13g28340.1                                                        48   2e-06

>Glyma10g02850.1 
          Length = 456

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 22/26 (84%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           M YVFAESWA EY N +LSKWPIKRW
Sbjct: 219 MNYVFAESWAPEYGNAVLSKWPIKRW 244


>Glyma02g16950.1 
          Length = 449

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/26 (80%), Positives = 22/26 (84%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           M YVFAESWA EY N +LSKWPIKRW
Sbjct: 232 MNYVFAESWAPEYGNAVLSKWPIKRW 257


>Glyma03g30600.1 
          Length = 418

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           M YVFAESWA +Y N +LSKWPIKRW
Sbjct: 179 MNYVFAESWAPQYGNAVLSKWPIKRW 204


>Glyma15g10720.1 
          Length = 463

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/26 (84%), Positives = 23/26 (88%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           MKYVFAESWA EY N ILSKWPIK+W
Sbjct: 247 MKYVFAESWAPEYGNAILSKWPIKKW 272


>Glyma19g33500.1 
          Length = 378

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           M YVFAESWA +Y N +LSKWPIKRW
Sbjct: 149 MNYVFAESWAPQYGNAVLSKWPIKRW 174


>Glyma13g28340.1 
          Length = 494

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 22/25 (88%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKR 25
           MKYVFAESWA EY N ILSKWPIK+
Sbjct: 247 MKYVFAESWAPEYGNAILSKWPIKK 271