Miyakogusa Predicted Gene

Lj0g3v0311009.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311009.1 tr|B9HB15|B9HB15_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_762913 PE=4
SV=1,45.69,4e-17,UCH,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; Cysteine proteinases,NULL; seg,NULL,CUFF.21004.1
         (471 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08200.1                                                       400   e-111
Glyma02g36480.1                                                       147   3e-35

>Glyma17g08200.1 
          Length = 903

 Score =  400 bits (1029), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 262/552 (47%), Positives = 311/552 (56%), Gaps = 101/552 (18%)

Query: 1   MWYTLDDNRVNHVSEREVLNQQAYMLFYVRDRKSIVPRKPVDIAKKENINTIVNGIRDSS 60
           MWYTLDDNRV+HVSEREVLNQQAYMLFYVRDRKSIVPRKPVDIAKKEN+ T +N  R+SS
Sbjct: 372 MWYTLDDNRVSHVSEREVLNQQAYMLFYVRDRKSIVPRKPVDIAKKENMKTNLNVNRESS 431

Query: 61  TSNHVLKEYPNGLVEPTLSAKTMKNMSNADLLGVSVSKDTLVEQKYSLVLAESMKQDNKP 120
           TSNHVLKEYPNG VE                      K  LV QK+S++LAE++ Q  + 
Sbjct: 432 TSNHVLKEYPNGTVEN------------------KAEKGALVLQKHSVILAENLIQSKRH 473

Query: 121 ASELSSCAQIMKDSPQS----------LSSIDHSEKDKYVHTDLTCMAAPVGDKTNMCNE 170
            SELSS AQ  KDSP            LSS+DHS KD  +  +L  +AAPVG K N+ NE
Sbjct: 474 GSELSSEAQAQKDSPDGLSVAKSELGCLSSLDHSGKDYSLPHNLKSLAAPVG-KNNLRNE 532

Query: 171 SEISKEGTKD--SIVP------------DFISQSPEK-IVGTKDINIAQDPSTNLSISTS 215
           +  SKEG KD  SIVP            ++ SQS +K +V   D+   QD STN++    
Sbjct: 533 NVFSKEGIKDSPSIVPSSTNPQNVELTTEWKSQSLKKNLVKIVDVATPQDSSTNMTNGIC 592

Query: 216 PITS---SDVNWQAGTSAPGSAPTNAGCIVCENAVGSQGLILNESECRSLNMERLXXXXX 272
           P TS     VN Q GTSA GS    A  +V E+ VGSQGL+LN+S   SLN E L     
Sbjct: 593 PKTSLIHLKVNHQLGTSAIGSVCEKASSVVHEDLVGSQGLVLNKSVNTSLNTESLNQKPL 652

Query: 273 XXXXXXXXXYQVSSMQLRPIFLYMTYTG-QKKNHKRCKRRKLSLRNLNKEKLDKHXXXXX 331
                    YQVS M LRPIF YM Y G +KKNHKR KRR LS++N NK+KLDK      
Sbjct: 653 KKSKKKFLKYQVSWMHLRPIFYYMAYLGPRKKNHKRIKRRTLSMKNPNKDKLDKLAFSSE 712

Query: 332 XXXXXX----XXXXXXXXXFARTQPQMHLATSME-------------------------- 361
                               A  +P  +  +S E                          
Sbjct: 713 DAKPDVFPCLSSCSDSKATKAGYRPSANFKSSDESLIETRAEGEFRKRIDHSCAVLASAA 772

Query: 362 -VEDLSGRG---------ERDQMHNSLMSMLTRGL--------EETVVARWDDIEIASSR 403
            +E++SG G         + D   +S    +  GL        EETVVARWDDIE+ SS+
Sbjct: 773 QIENISGSGSVVSQFEARQADSAQDSTRDQMHNGLMSMPNGGPEETVVARWDDIELPSSQ 832

Query: 404 ALETKSSEKVKDIGYVGDEWDEELDKGKRKKLRTFKHNFDGPNIFQEIATEKFKSKRAKL 463
            LE+K ++K   IGYVGDEWDEE DKGKRKK+R FKH+F GPN+FQEIA EK K KRAK 
Sbjct: 833 HLESK-NDKTVSIGYVGDEWDEEYDKGKRKKIRGFKHSFGGPNLFQEIAVEKSKFKRAKF 891

Query: 464 E----GNPPFRI 471
           +    GNPPFRI
Sbjct: 892 DQSCSGNPPFRI 903


>Glyma02g36480.1 
          Length = 434

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/130 (60%), Positives = 91/130 (70%), Gaps = 18/130 (13%)

Query: 10  VNHVSEREVLNQQAYMLFYVRDRKSIVPRKPVDIAKKENINTIVNGIRDSSTSNHVLKEY 69
           V+HVSEREVLNQQAYMLFYVRDRK+IVPRKPVDIAKKEN+ T VNG R+SSTSNHVL+EY
Sbjct: 304 VSHVSEREVLNQQAYMLFYVRDRKNIVPRKPVDIAKKENMKTNVNGNRESSTSNHVLQEY 363

Query: 70  PNGLVEPTLSAKTMKNMSNADLLGVSVSKDTLVEQKYSLVLAESMKQDNKPASELSSCAQ 129
           PNG +E                      KD LV QK++++LAES+ Q  +  SELSS AQ
Sbjct: 364 PNGTIEN------------------KAEKDALVLQKHNVILAESLMQSKRHGSELSSKAQ 405

Query: 130 IMKDSPQSLS 139
              DSP  LS
Sbjct: 406 AQNDSPDGLS 415