Miyakogusa Predicted Gene

Lj0g3v0310909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0310909.1 Non Chatacterized Hit- tr|I3T002|I3T002_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.07,0,Vac_ImportDeg,Vacuolar import/degradation protein Vid24;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,,CUFF.20975.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g24570.1                                                       406   e-113
Glyma03g12140.1                                                       291   4e-79

>Glyma01g24570.1 
          Length = 216

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/216 (89%), Positives = 203/216 (93%), Gaps = 1/216 (0%)

Query: 1   MPVRVLENVAV-SQTVLGPNARRGSFQSCSLLRVGQAFSGTQNVSSLQKDEAWRVNVRIQ 59
           MPVRVLEN A  S  V G N+ R S QSCSLL VGQAFSGTQNVSS+QKDEAWRVNVRIQ
Sbjct: 1   MPVRVLENTAAPSSQVSGANSGRSSCQSCSLLGVGQAFSGTQNVSSVQKDEAWRVNVRIQ 60

Query: 60  GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDIKNYTFFTGKWEAAPEDDIRHWTKF 119
           GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVD KNYTFFTGKWEA+PEDDIRHW+KF
Sbjct: 61  GCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEASPEDDIRHWSKF 120

Query: 120 PSFSPILGQVELDGGKNLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGS 179
           PSFSP+LGQVE DGGK+LDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYY+CFSCS+GS
Sbjct: 121 PSFSPLLGQVEADGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYICFSCSNGS 180

Query: 180 ISGFYYDPNSSPFQKLELKSTNDGRSGFSFSSYELQ 215
           ISGFYYDPNSSP+QKLELKSTNDGRSGFSFSSYELQ
Sbjct: 181 ISGFYYDPNSSPYQKLELKSTNDGRSGFSFSSYELQ 216


>Glyma03g12140.1 
          Length = 144

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 135/144 (93%), Positives = 142/144 (98%)

Query: 72  MEALNVPMADTPVVTFWEGEIVDIKNYTFFTGKWEAAPEDDIRHWTKFPSFSPILGQVEL 131
           MEALNVPMADTPVVTFWEGEIVD KNYTFFTGKWEA+PEDDIRHW+KFPSFSP+LGQVE 
Sbjct: 1   MEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEASPEDDIRHWSKFPSFSPLLGQVEA 60

Query: 132 DGGKNLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSISGFYYDPNSSP 191
           DGGK+LDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYY+CFSCSDGSISGFYYDPNSSP
Sbjct: 61  DGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYICFSCSDGSISGFYYDPNSSP 120

Query: 192 FQKLELKSTNDGRSGFSFSSYELQ 215
           +QKLELKSTNDGRSGFSFSSY+LQ
Sbjct: 121 YQKLELKSTNDGRSGFSFSSYQLQ 144