Miyakogusa Predicted Gene

Lj0g3v0309979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309979.1 Non Chatacterized Hit- tr|C6T0J7|C6T0J7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52889
PE,68.63,0.00000000004,seg,NULL,CUFF.20916.1
         (51 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g07230.1                                                        46   8e-06

>Glyma11g07230.1 
          Length = 102

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 28/51 (54%)

Query: 1   MLFIASCMTLYXXXXXXXXXXXXXXXLLPIRLRASRQTLTRKRERRLPLSI 51
           ML  +S MTLY                LP RLR SRQTL R RERRLPLSI
Sbjct: 52  MLVFSSLMTLYLRHFWLFGVVICFNIFLPTRLRMSRQTLARNRERRLPLSI 102