Miyakogusa Predicted Gene

Lj0g3v0309399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309399.1 tr|G3GRH6|G3GRH6_CRIGR RNA polymerase-associated
protein LEO1 OS=Cricetulus griseus GN=I79_000125
PE,42.31,0.00000001,seg,NULL; SUBFAMILY NOT NAMED,NULL; LEO1
PROTEIN,NULL; Leo1,Leo1-like
protein,NODE_13333_length_1668_cov_92.332733.path3.1
         (242 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g21900.2                                                       373   e-103
Glyma06g21900.1                                                       372   e-103
Glyma04g32540.1                                                       371   e-103

>Glyma06g21900.2 
          Length = 633

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/242 (75%), Positives = 193/242 (79%)

Query: 1   MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGAKKRIRLENNIVRWRDVRNPDGTKSV 60
           MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESG +KRIRLENNIVRWR  +NPDGT S 
Sbjct: 265 MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGTRKRIRLENNIVRWRTTKNPDGTTSC 324

Query: 61  ESNARFVRWSDGSVQLLIGNEVLDISVQDAQHDQAHLFLRHGKGVLQSQGRLLRKMRFMP 120
           ESNARFVRWSDGS+QLLIGNEVLDISVQDAQHDQAHLFLRHGKG+LQSQGRLLRKMRFMP
Sbjct: 325 ESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMP 384

Query: 121 SSLTSNSHRLLTALVDSRHKKVYKVKNCITDIDPXXXXXXXXXXXSQTIRANVILNRKRE 180
           SSL+SNSHRLLTALVDSRHKKV+KVKNCITDIDP           SQ IRANV+LNRKRE
Sbjct: 385 SSLSSNSHRLLTALVDSRHKKVFKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKRE 444

Query: 181 KLSRKYTPAVERRRQLSPGFXXXXXXXXXXXXXXXSRPSQXXXXXXXXXXXXXXXXIMNA 240
           K++RKYTPAVERRRQLSPGF               +R SQ                IMNA
Sbjct: 445 KVNRKYTPAVERRRQLSPGFLEDALDEEDEADYYDNRRSQHRFEDDLEAEARAEKRIMNA 504

Query: 241 KK 242
           KK
Sbjct: 505 KK 506


>Glyma06g21900.1 
          Length = 674

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/242 (75%), Positives = 193/242 (79%)

Query: 1   MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGAKKRIRLENNIVRWRDVRNPDGTKSV 60
           MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESG +KRIRLENNIVRWR  +NPDGT S 
Sbjct: 265 MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGTRKRIRLENNIVRWRTTKNPDGTTSC 324

Query: 61  ESNARFVRWSDGSVQLLIGNEVLDISVQDAQHDQAHLFLRHGKGVLQSQGRLLRKMRFMP 120
           ESNARFVRWSDGS+QLLIGNEVLDISVQDAQHDQAHLFLRHGKG+LQSQGRLLRKMRFMP
Sbjct: 325 ESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMP 384

Query: 121 SSLTSNSHRLLTALVDSRHKKVYKVKNCITDIDPXXXXXXXXXXXSQTIRANVILNRKRE 180
           SSL+SNSHRLLTALVDSRHKKV+KVKNCITDIDP           SQ IRANV+LNRKRE
Sbjct: 385 SSLSSNSHRLLTALVDSRHKKVFKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKRE 444

Query: 181 KLSRKYTPAVERRRQLSPGFXXXXXXXXXXXXXXXSRPSQXXXXXXXXXXXXXXXXIMNA 240
           K++RKYTPAVERRRQLSPGF               +R SQ                IMNA
Sbjct: 445 KVNRKYTPAVERRRQLSPGFLEDALDEEDEADYYDNRRSQHRFEDDLEAEARAEKRIMNA 504

Query: 241 KK 242
           KK
Sbjct: 505 KK 506


>Glyma04g32540.1 
          Length = 629

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/242 (75%), Positives = 191/242 (78%)

Query: 1   MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGAKKRIRLENNIVRWRDVRNPDGTKSV 60
           MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESG +KRIRLENNIVRWR  RNPDGT S 
Sbjct: 260 MNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGTRKRIRLENNIVRWRTTRNPDGTTSC 319

Query: 61  ESNARFVRWSDGSVQLLIGNEVLDISVQDAQHDQAHLFLRHGKGVLQSQGRLLRKMRFMP 120
           ESNARFVRWSDGS+QLLIGNEVLDISVQDAQHDQAHLFLRHGKG+LQSQGRLLRKMRFMP
Sbjct: 320 ESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMP 379

Query: 121 SSLTSNSHRLLTALVDSRHKKVYKVKNCITDIDPXXXXXXXXXXXSQTIRANVILNRKRE 180
           SSL+SNSHRLLTALVDSRHKK +KVKNCITDIDP           SQ IRANV+LNRKRE
Sbjct: 380 SSLSSNSHRLLTALVDSRHKKAFKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKRE 439

Query: 181 KLSRKYTPAVERRRQLSPGFXXXXXXXXXXXXXXXSRPSQXXXXXXXXXXXXXXXXIMNA 240
           K++RKYTPAVERRRQLSPGF               +  SQ                IMNA
Sbjct: 440 KVNRKYTPAVERRRQLSPGFLEDALDEEDEADYYDNHRSQRRFEDDLEVEARAEKRIMNA 499

Query: 241 KK 242
           KK
Sbjct: 500 KK 501