Miyakogusa Predicted Gene
- Lj0g3v0308719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0308719.1 tr|G7JMP2|G7JMP2_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_4g10,53,1e-18,seg,NULL; zf-CCCH,Zinc finger, CCCH-type; ZINC
FINGER CCCH DOMAIN-CONTAINING PROTEIN,NULL; PROTEIN P,CUFF.20856.1
(190 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g13580.1 79 2e-15
Glyma05g02920.1 79 3e-15
Glyma04g36670.1 77 9e-15
Glyma06g18240.1 72 3e-13
Glyma02g17260.1 53 2e-07
Glyma17g13580.2 53 2e-07
Glyma02g17260.2 52 3e-07
Glyma15g10230.1 50 1e-06
Glyma10g02550.1 50 2e-06
Glyma10g02550.2 49 2e-06
Glyma10g31370.3 48 5e-06
Glyma10g31370.1 48 5e-06
Glyma10g31370.2 48 5e-06
Glyma07g37980.1 47 9e-06
>Glyma17g13580.1
Length = 501
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 18/95 (18%)
Query: 110 MTNPATETN---DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LP 155
M NPA +TN HQK++ C +L+TGDCK KS+C LP
Sbjct: 361 MNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLP 420
Query: 156 LQNLSDKGLPLRPDQNVCSHYS----CKFESACKY 186
NLSDKGLPLRPDQ+VCSHYS CKF ACK+
Sbjct: 421 PCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKF 455
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 52/130 (40%), Gaps = 53/130 (40%)
Query: 62 KTGDCKEATERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETNDH 120
K G+ +E TERS C+YYQR G CK+GK C Y HTRG + T PA
Sbjct: 190 KAGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRG--------KISTAPA------ 235
Query: 121 QKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDKGLPLRPDQNVCSHY---- 176
PL L+ GLP+R + C +Y
Sbjct: 236 ----------------------------------PLLELNFLGLPIRLGERECPYYMRTG 261
Query: 177 SCKFESACKY 186
SCKF + CK+
Sbjct: 262 SCKFGANCKF 271
>Glyma05g02920.1
Length = 490
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 18/95 (18%)
Query: 110 MTNPATETN---DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LP 155
M NPA +TN HQK++ C +L+TGDCK KS+C LP
Sbjct: 351 MNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLP 410
Query: 156 LQNLSDKGLPLRPDQNVCSHYS----CKFESACKY 186
NLSDKGLPLRPDQ+VCSHYS CKF ACK+
Sbjct: 411 PCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKF 445
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 53/130 (40%), Gaps = 53/130 (40%)
Query: 62 KTGDCKEATERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETNDH 120
K G+ +E TERS C+YYQR G CK+GK C Y HTRG + T PA
Sbjct: 180 KAGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRG--------KISTAPA------ 225
Query: 121 QKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDKGLPLRPDQNVCSHY---- 176
PL L+ GLP+RP + C +Y
Sbjct: 226 ----------------------------------PLLELNFLGLPIRPGERECPYYMRTG 251
Query: 177 SCKFESACKY 186
SCKF + CK+
Sbjct: 252 SCKFGANCKF 261
>Glyma04g36670.1
Length = 570
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 18/95 (18%)
Query: 110 MTNPATETN---DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LP 155
M NPA E+N HQK++ C +L+TGDCK KS+C LP
Sbjct: 437 MNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLP 496
Query: 156 LQNLSDKGLPLRPDQNVCSHYS----CKFESACKY 186
L NLSDKGLPLRPDQNVC++Y CKF ACK+
Sbjct: 497 LCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKF 531
>Glyma06g18240.1
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 101 SFDQASERSMTNPATETN---DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC---- 153
S S M NPA E+N HQK++ C +L+TGDCK KS+C
Sbjct: 208 SLHPPSTYVMNNPAIESNVYMHHQKQMQVEEFPERPGEPECSYFLKTGDCKFKSNCKFHH 267
Query: 154 -------LPLQNLSDKGLPLRPDQNVCSHYS----CKFESACKYPYYP 190
LP NLSDKGLPLRP+Q VC++Y CKF ACK+ + P
Sbjct: 268 PKNRIARLPPCNLSDKGLPLRPEQTVCTYYRRYGICKFGPACKFDHPP 315
>Glyma02g17260.1
Length = 471
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 60 YLKTGDCKEATERS-TEVCRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETN 118
+L G + ERS C YY R GVC YG C Y H R + A+ T
Sbjct: 36 HLTLGGGESYPERSGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAVAAA-------VRATG 88
Query: 119 DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LPLQNLSDKGLPLR 167
D+ +++ C+ YL+TG CK + C L L+ G PLR
Sbjct: 89 DYPERV---------GEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNVYGYPLR 139
Query: 168 PDQNVCSHY----SCKFESACKY 186
P + CS+Y CKF +CK+
Sbjct: 140 PGEKECSYYLKTGQCKFGISCKF 162
>Glyma17g13580.2
Length = 472
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 110 MTNPATETN---DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LP 155
M NPA +TN HQK++ C +L+TGDCK KS+C LP
Sbjct: 361 MNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLP 420
Query: 156 LQNLSDKGLPLRP 168
NLSDKGLPLRP
Sbjct: 421 PCNLSDKGLPLRP 433
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 52/130 (40%), Gaps = 53/130 (40%)
Query: 62 KTGDCKEATERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETNDH 120
K G+ +E TERS C+YYQR G CK+GK C Y HTRG + T PA
Sbjct: 190 KAGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRG--------KISTAPA------ 235
Query: 121 QKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDKGLPLRPDQNVCSHY---- 176
PL L+ GLP+R + C +Y
Sbjct: 236 ----------------------------------PLLELNFLGLPIRLGERECPYYMRTG 261
Query: 177 SCKFESACKY 186
SCKF + CK+
Sbjct: 262 SCKFGANCKF 271
>Glyma02g17260.2
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 60 YLKTGDCKEATERS-TEVCRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETN 118
+L G + ERS C YY R GVC YG C Y H R + A+ T
Sbjct: 36 HLTLGGGESYPERSGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAVAAA-------VRATG 88
Query: 119 DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LPLQNLSDKGLPLR 167
D+ +++ C+ YL+TG CK + C L L+ G PLR
Sbjct: 89 DYPERV---------GEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNVYGYPLR 139
Query: 168 PDQNVCSHY----SCKFESACKY 186
P + CS+Y CKF +CK+
Sbjct: 140 PGEKECSYYLKTGQCKFGISCKF 162
>Glyma15g10230.1
Length = 468
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 35/145 (24%)
Query: 61 LKTGDCKEAT--ERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATET 117
L G E + +R EV C YY R G C +G C + H R + +ER+ T
Sbjct: 35 LGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVAGAERT-------T 87
Query: 118 NDHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC---LPLQ---------NLSDKGLP 165
++ +++ C+ Y+ T CK S C P Q +LS G P
Sbjct: 88 GEYPERV---------GQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYP 138
Query: 166 LRPDQNVCSHY----SCKFESACKY 186
LRP + CS+Y CKF + CK+
Sbjct: 139 LRPGEKECSYYVKTGQCKFGATCKF 163
>Glyma10g02550.1
Length = 460
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 32/143 (22%)
Query: 60 YLKTGDCKEATER-STEVCRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETN 118
+L G + ER C YY R GVC YG C Y H ++ T
Sbjct: 36 HLTLGGGESYPERPGVPNCVYYMRTGVCGYGSRCRYNHP-------RDRAAVAAAVRVTG 88
Query: 119 DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LPLQNLSDKGLPLR 167
D+ +++ C+ YL+TG CK + C L L+ G PLR
Sbjct: 89 DYPERV---------GEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLTQAPLNIYGYPLR 139
Query: 168 PDQNVCSHY----SCKFESACKY 186
P + CS+Y CKF +CK+
Sbjct: 140 PGEKECSYYLKTGQCKFGISCKF 162
>Glyma10g02550.2
Length = 343
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 60 YLKTGDCKEATER-STEVCRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATETN 118
+L G + ER C YY R GVC YG C Y H R + A+ T
Sbjct: 36 HLTLGGGESYPERPGVPNCVYYMRTGVCGYGSRCRYNHPRDRAAVAAA-------VRVTG 88
Query: 119 DHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDC-----------LPLQNLSDKGLPLR 167
D+ +++ C+ YL+TG CK + C L L+ G PLR
Sbjct: 89 DYPERV---------GEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLTQAPLNIYGYPLR 139
Query: 168 PDQNVCSHY----SCKFESACKY 186
P + CS+Y CKF +CK+
Sbjct: 140 PGEKECSYYLKTGQCKFGISCKF 162
>Glyma10g31370.3
Length = 421
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 37/146 (25%)
Query: 61 LKTGDCKEA---TERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATE 116
L+TG+ ++ ER E C YY R G+C++G C + H A+ R +
Sbjct: 24 LRTGETMDSGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKLAIATARMI------ 77
Query: 117 TNDHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDK------------GL 164
+ ++I C+ YL+TG CK + C + D+ G
Sbjct: 78 -GEFPERI---------GQPECQYYLKTGTCKFGATCK-FHHPKDQAGIAGRVALNILGY 126
Query: 165 PLRPDQNVCSHY----SCKFESACKY 186
PLRP++ C++Y CKF + CK+
Sbjct: 127 PLRPNEPECTYYLRTGQCKFGNTCKF 152
>Glyma10g31370.1
Length = 421
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 37/146 (25%)
Query: 61 LKTGDCKEA---TERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATE 116
L+TG+ ++ ER E C YY R G+C++G C + H A+ R +
Sbjct: 24 LRTGETMDSGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKLAIATARMI------ 77
Query: 117 TNDHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDK------------GL 164
+ ++I C+ YL+TG CK + C + D+ G
Sbjct: 78 -GEFPERI---------GQPECQYYLKTGTCKFGATCK-FHHPKDQAGIAGRVALNILGY 126
Query: 165 PLRPDQNVCSHY----SCKFESACKY 186
PLRP++ C++Y CKF + CK+
Sbjct: 127 PLRPNEPECTYYLRTGQCKFGNTCKF 152
>Glyma10g31370.2
Length = 401
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 37/146 (25%)
Query: 61 LKTGDCKEA---TERSTEV-CRYYQRYGVCKYGKDCWYIHTRGNSFDQASERSMTNPATE 116
L+TG+ ++ ER E C YY R G+C++G C + H A+ R +
Sbjct: 4 LRTGETMDSGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKLAIATARMI------ 57
Query: 117 TNDHQKKIXXXXXXXXXXXXXCRSYLETGDCKSKSDCLPLQNLSDK------------GL 164
+ ++I C+ YL+TG CK + C + D+ G
Sbjct: 58 -GEFPERI---------GQPECQYYLKTGTCKFGATCK-FHHPKDQAGIAGRVALNILGY 106
Query: 165 PLRPDQNVCSHY----SCKFESACKY 186
PLRP++ C++Y CKF + CK+
Sbjct: 107 PLRPNEPECTYYLRTGQCKFGNTCKF 132
>Glyma07g37980.1
Length = 484
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 15/64 (23%)
Query: 138 CRSYLETGDCKSKSDC---------LPLQN--LSDKGLPLRPDQNVCSHYS----CKFES 182
C Y++TGDCK C P N LS GLPLRP C+HY+ CKF S
Sbjct: 311 CHHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQRGVCKFGS 370
Query: 183 ACKY 186
ACK+
Sbjct: 371 ACKF 374