Miyakogusa Predicted Gene

Lj0g3v0308579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0308579.1 tr|G7JU86|G7JU86_MEDTR Cytosine-specific
methyltransferase OS=Medicago truncatula GN=MTR_4g113420
PE,38.82,2e-18,BAH,Bromo adjacent homology (BAH) domain; DNA
(CYTOSINE-5)-METHYLTRANSFERASE 1 (DNMT1),NULL; CYTOSIN,CUFF.20840.1
         (328 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01120.1                                                       296   2e-80
Glyma01g36500.1                                                       244   9e-65
Glyma01g36500.2                                                       232   4e-61
Glyma09g26010.1                                                        84   2e-16
Glyma16g17720.1                                                        67   2e-11
Glyma11g30960.1                                                        49   5e-06

>Glyma01g01120.1 
          Length = 744

 Score =  296 bits (758), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/217 (65%), Positives = 163/217 (75%), Gaps = 1/217 (0%)

Query: 112 TLYKLYDDAHVKAEEGDDNYICKIVEMFEACDGTLHFTAQWYYRAKDTVIKNLAFLIEEP 171
            LYKLYDDAHVKAEEG+DNYICKIVE+FEA DG L+FTAQWYYRAKDTVIK LA+LIE P
Sbjct: 1   MLYKLYDDAHVKAEEGEDNYICKIVEIFEAIDGALYFTAQWYYRAKDTVIKKLAYLIE-P 59

Query: 172 RRIFYSEVKDDNPLDCLLEKLNIARVTLNVDLAEKEKTIPLCDYYCDTQYILPYSTFVKF 231
           +R+F+SEV+DDNPLDCL+EKLNIAR+TLNVDL  K++TIP CDYYCDTQY+LPYSTFV  
Sbjct: 60  KRVFFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETIPPCDYYCDTQYLLPYSTFVNL 119

Query: 232 PPXXXXXXXXXXXXXXXXXNVTGKSEVDSQHKDTSNXXXXXXXXXXXXXXYSGCGAMSTG 291
           P                  N  GK EV+SQ K+                 Y GCGAMSTG
Sbjct: 120 PSENGESGSETSSTISSETNGIGKYEVNSQPKEAFLPEESKDPEMKLLDLYCGCGAMSTG 179

Query: 292 LCLGANLSGSNLVTRWAVDLSEYACASLKLNHPETQI 328
           LCLG NLSG NLVTRWAVDL+++AC  LKLNHPET++
Sbjct: 180 LCLGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEV 216


>Glyma01g36500.1 
          Length = 833

 Score =  244 bits (623), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 128/275 (46%), Positives = 170/275 (61%), Gaps = 9/275 (3%)

Query: 61  FVGDPVPAEEARQHWPHRYQ---EKKQSARSK---SSSDDDILQARRHYREAEVDGSTLY 114
           FVG P+P+ EAR  WPHRY    +KK  ARS    +S + +++ AR HYR+A+VDG  +Y
Sbjct: 40  FVGKPIPSAEARAKWPHRYPSEVKKKAPARSSEEVTSENSEVMLARCHYRQAKVDG-VVY 98

Query: 115 KLYDDAHVKAEEGDDNYICKIVEMFEACDGTLHFTAQWYYRAKDTVIKNLAFLIEEPRRI 174
            LYDDA+VKAE+G  +YI +IVEMFE  D    F AQW+YRA+DTVIKN   L+++ +R+
Sbjct: 99  NLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQWFYRAEDTVIKNHGDLVDK-KRV 157

Query: 175 FYSEVKDDNPLDCLLEKLNIARVTLNVDLAEKEKTIPLCDYYCDTQYILPYSTFVKFPPX 234
           F S+VKD NPLDC++ K+ I +   +VDLA K+  +P CDYY D +Y +PY TF      
Sbjct: 158 FISDVKDVNPLDCIVSKVKIFKKNPSVDLASKKAKLPFCDYYYDMKYTVPYLTFSNLVNE 217

Query: 235 XXXXXXXXXXXXXXXXNVTG-KSEVDSQHKDTSNXXXXXXXXXXXXXXYSGCGAMSTGLC 293
                              G  +  +   + T+               YSGCGAMSTGLC
Sbjct: 218 TVKTESDASSTISSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGAMSTGLC 277

Query: 294 LGANLSGSNLVTRWAVDLSEYACASLKLNHPETQI 328
           LGA+L+G  LVT WAVD++ +AC SLKLNHPET +
Sbjct: 278 LGASLAGIKLVTMWAVDINAHACKSLKLNHPETHV 312


>Glyma01g36500.2 
          Length = 594

 Score =  232 bits (591), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/281 (44%), Positives = 169/281 (60%), Gaps = 15/281 (5%)

Query: 61  FVGDPVPAEEARQHWPHRYQ---EKKQSARSK---SSSDDDILQARRHYREAEVDGSTLY 114
           FVG P+P+ EAR  WPHRY    +KK  ARS    +S + +++ AR HYR+A+VDG  +Y
Sbjct: 40  FVGKPIPSAEARAKWPHRYPSEVKKKAPARSSEEVTSENSEVMLARCHYRQAKVDG-VVY 98

Query: 115 KLYDDAHVKAEEGDDNYICKIVEMFEACDGTLHFTAQWYYRAKDTVIKNLAFLIEEPRRI 174
            LYDDA+VKAE+G  +YI +IVEMFE  D    F AQW+YRA+DTVIKN   L+++ +R+
Sbjct: 99  NLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQWFYRAEDTVIKNHGDLVDK-KRV 157

Query: 175 FYSEVKDDNPLDCLLEKLNIA------RVTLNVDLAEKEKTIPLCDYYCDTQYILPYSTF 228
           F S+VKD NPLDC++ K  ++       + + V LA K+  +P CDYY D +Y +PY TF
Sbjct: 158 FISDVKDVNPLDCIVSKDYLSFWNPYIYICVCVYLASKKAKLPFCDYYYDMKYTVPYLTF 217

Query: 229 VKFPPXXXXXXXXXXXXXXXXXNVTG-KSEVDSQHKDTSNXXXXXXXXXXXXXXYSGCGA 287
                                    G  +  +   + T+               YSGCGA
Sbjct: 218 SNLVNETVKTESDASSTISSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGA 277

Query: 288 MSTGLCLGANLSGSNLVTRWAVDLSEYACASLKLNHPETQI 328
           MSTGLCLGA+L+G  LVT WAVD++ +AC SLKLNHPET +
Sbjct: 278 MSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHPETHV 318


>Glyma09g26010.1 
          Length = 165

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 48/74 (64%)

Query: 255 KSEVDSQHKDTSNXXXXXXXXXXXXXXYSGCGAMSTGLCLGANLSGSNLVTRWAVDLSEY 314
           K EV+SQ K+                 Y GC AMSTGLCLG NLSG NLVTRW VDL+++
Sbjct: 3   KYEVNSQPKEAFLPEESKDPEMKLLDLYCGCRAMSTGLCLGGNLSGMNLVTRWVVDLNKH 62

Query: 315 ACASLKLNHPETQI 328
           AC  LKLNHP+T++
Sbjct: 63  ACECLKLNHPDTEV 76


>Glyma16g17720.1 
          Length = 735

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 34/47 (72%)

Query: 282 YSGCGAMSTGLCLGANLSGSNLVTRWAVDLSEYACASLKLNHPETQI 328
           YSGCG MSTGLCLGA  +  NLVTRWAVD    A  SLKLNH +T +
Sbjct: 139 YSGCGGMSTGLCLGAKTASVNLVTRWAVDSDRSAGESLKLNHSDTHV 185


>Glyma11g30960.1 
          Length = 221

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 29/56 (51%)

Query: 251 NVTGKSEVDSQHKDTSNXXXXXXXXXXXXXXYSGCGAMSTGLCLGANLSGSNLVTR 306
           N  GK EVDSQ K+                 Y GC AMSTGLCLG NLSG  L+ R
Sbjct: 11  NGIGKYEVDSQPKEAFLPEESKDPKMKLLDLYCGCRAMSTGLCLGGNLSGVTLLLR 66