Miyakogusa Predicted Gene

Lj0g3v0308569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0308569.1 tr|I1J4I8|I1J4I8_SOYBN Cytosine-specific
methyltransferase OS=Glycine max PE=3 SV=1,81.51,0,DNA_methylase,C-5
cytosine methyltransferase; DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(DNMT1),NULL; CYT,CUFF.20838.1
         (351 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01120.1                                                       610   e-175
Glyma01g36500.1                                                       487   e-138
Glyma11g08860.1                                                       476   e-134
Glyma16g17720.1                                                       410   e-114
Glyma04g36150.1                                                       177   2e-44
Glyma06g18790.1                                                       176   2e-44
Glyma01g36500.2                                                       158   7e-39

>Glyma01g01120.1 
          Length = 744

 Score =  610 bits (1573), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 293/357 (82%), Positives = 326/357 (91%), Gaps = 6/357 (1%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           MDIVQYLKPKF LMENVVD+++F++GF+GRYALGRLLQMNYQ+RLGIMAAGAYGLPQFRL
Sbjct: 388 MDIVQYLKPKFTLMENVVDLVKFAEGFLGRYALGRLLQMNYQARLGIMAAGAYGLPQFRL 447

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           RVF+WGAAP++KLPQFPLPTHDVI+RGVIP+EF INTVAYNEG   QLQ+KLLLEDAISD
Sbjct: 448 RVFLWGAAPSQKLPQFPLPTHDVIVRGVIPLEFEINTVAYNEGQKVQLQKKLLLEDAISD 507

Query: 121 LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTR-KSSNSMLYDHRSLKLNADD 179
           LP + NNERRDE++YDK+ QTEFQ+FIRLSK+EML + +R KSS S+LYDHR L+LNADD
Sbjct: 508 LPRVQNNERRDEIKYDKAAQTEFQRFIRLSKHEMLELQSRTKSSKSLLYDHRPLELNADD 567

Query: 180 YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSS 239
           YQRVCRIPKKKGGCFRDLPGVRV  DNKVEW+PDV+RVYL SGKPLVPDYAM+FV GTSS
Sbjct: 568 YQRVCRIPKKKGGCFRDLPGVRVGADNKVEWDPDVERVYLDSGKPLVPDYAMTFVNGTSS 627

Query: 240 KPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 299
           KPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVL+IRENARLQGFPD+YKLCGPVK+RY
Sbjct: 628 KPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLTIRENARLQGFPDFYKLCGPVKERY 687

Query: 300 IQVGNAVAVPVARALGYTLGLAFQG--AVGDGPLYKLVDGFPM---NFPSSSSEENV 351
           IQVGNAVAVPVARALGYTLGLAF+G  +  D PLYKL D FPM      S SSE++V
Sbjct: 688 IQVGNAVAVPVARALGYTLGLAFEGSTSTSDDPLYKLPDKFPMIRDRVSSVSSEDDV 744


>Glyma01g36500.1 
          Length = 833

 Score =  487 bits (1253), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/347 (68%), Positives = 280/347 (80%), Gaps = 7/347 (2%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           MDI+ +LKPK+ LMENVVDIL+FS G++GRYA+GRL+ MNYQ+R+G+MAAG+YGLPQFR+
Sbjct: 476 MDIIDFLKPKYVLMENVVDILKFSGGYLGRYAIGRLVAMNYQARMGMMAAGSYGLPQFRM 535

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           RVF+WGA PTE+LP +PLPTH+V+ RG +P EF   TVAY++    QL   LLL+DAISD
Sbjct: 536 RVFLWGARPTEQLPPYPLPTHEVVSRGFVPTEFEEITVAYDKKDTCQLAGALLLDDAISD 595

Query: 121 LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLG-IPTRKSS-NSMLYDHRSLKLNAD 178
           LPP+ N+E +DE  Y    +TEFQ++IRL KNEM+G + T +S+   +LYDHR L+LN D
Sbjct: 596 LPPVTNDENQDERNYGAPARTEFQRYIRLKKNEMVGSMATAQSTPRRILYDHRPLQLNKD 655

Query: 179 DYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTS 238
           DY RVC+IP+KKG  FRDLPGV V   NKVEW+P V+RV L SGKPLVPDYAM+FV GTS
Sbjct: 656 DYDRVCQIPQKKGANFRDLPGVLVN-GNKVEWDPSVERVMLDSGKPLVPDYAMTFVRGTS 714

Query: 239 SKPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQR 298
           +KPF RLWWDE VPTVVTRAEPHNQAILHP Q+RVL+IRENARLQGFPD YKLCGPVK+R
Sbjct: 715 TKPFGRLWWDEIVPTVVTRAEPHNQAILHPRQNRVLTIRENARLQGFPDCYKLCGPVKER 774

Query: 299 YIQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPSS 345
           YIQVGNAVAVPVA ALGYT GLA QG   D PL  L    P  +PS 
Sbjct: 775 YIQVGNAVAVPVALALGYTFGLACQGLSDDKPLTTL----PFKYPSC 817


>Glyma11g08860.1 
          Length = 407

 Score =  476 bits (1226), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/351 (66%), Positives = 279/351 (79%), Gaps = 8/351 (2%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           MDI+ +LKPK+ LMENVVDILRFS G++GRYA+ RL+ MNYQ+R+G+MAAG+YGLPQFR+
Sbjct: 57  MDIIDFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGSYGLPQFRM 116

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           RVF+WGA PTEKLP +PLPTH+V+ RG +P EF   TVAY++     L   LLLEDAISD
Sbjct: 117 RVFLWGARPTEKLPPYPLPTHEVVSRGSVPTEFEEITVAYDKKDTCHLAGALLLEDAISD 176

Query: 121 LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLG--IPTRKSSNSMLYDHRSLKLNAD 178
           LP + N+E +DE  Y+   +TEFQK+IRL KNEM+G     + + + +LYDHR L+LN D
Sbjct: 177 LPHVTNDENQDERNYEAPSETEFQKYIRLKKNEMVGSMASAQSAPDRILYDHRPLQLNKD 236

Query: 179 DYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTS 238
           DY+RVC+IP+KKG  FRDLPGV V   NKV+W+P V+RV L SGKPLVPDYAM+FV GTS
Sbjct: 237 DYERVCQIPQKKGANFRDLPGVLVN-GNKVQWDPSVQRVMLDSGKPLVPDYAMTFVRGTS 295

Query: 239 SKPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQR 298
           SKPF RLWWDE V TVVTRAEPHNQAILHP Q+RVL+IRENARLQGFPD YKLCGPVK+R
Sbjct: 296 SKPFGRLWWDEIVSTVVTRAEPHNQAILHPTQNRVLTIRENARLQGFPDCYKLCGPVKER 355

Query: 299 YIQVGNAVAVPVARALGYTLGLAFQGAVG-DGPLYKLVDGFPMNFPSSSSE 348
           YIQVGNAVAVPVA ALGYT GLA QG +  D PL  L    P  +P ++ +
Sbjct: 356 YIQVGNAVAVPVALALGYTFGLACQGLLSDDNPLTTL----PFKYPRAADQ 402


>Glyma16g17720.1 
          Length = 735

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/338 (60%), Positives = 246/338 (72%), Gaps = 10/338 (2%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           MD+V++LKP++ LMENVVDILRF KG +GRYAL RL+ MNYQ+RLGI+AAG YGLPQFRL
Sbjct: 347 MDMVKFLKPRYVLMENVVDILRFDKGSLGRYALSRLVHMNYQARLGIIAAGCYGLPQFRL 406

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           RVF+WGA P+E +PQFPLPTHDVI+R   P EF  N VAY+E    +L++  +++DAISD
Sbjct: 407 RVFLWGAHPSEVIPQFPLPTHDVIVRYWPPPEFERNVVAYDEEQPRELEKATVIQDAISD 466

Query: 121 LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNADDY 180
           LP + N E RDEM Y   P+TEFQ++IR +K E            +LYDHR   L  DDY
Sbjct: 467 LPAVMNTETRDEMPYQNPPETEFQRYIRSTKYE---------KRPLLYDHRPYFLFEDDY 517

Query: 181 QRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSSK 240
            RVC+IPK+KG  FRDLPGV V  DN V  +P  +   L SGKPLVP+Y  +F  G S +
Sbjct: 518 LRVCQIPKRKGANFRDLPGVIVGADNVVRRHP-TENPLLPSGKPLVPEYCFTFEHGKSKR 576

Query: 241 PFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRYI 300
           PFARLWWDE +PT +T    HNQ +LHPEQDRVL+IRE ARLQGFPDYY+  G VK+RY 
Sbjct: 577 PFARLWWDENLPTALTFPSCHNQVVLHPEQDRVLTIREFARLQGFPDYYRFYGTVKERYC 636

Query: 301 QVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGF 338
           Q+GNAVAVPV+RALGY LGLA +   G+ PL  L   F
Sbjct: 637 QIGNAVAVPVSRALGYALGLACRKLNGNEPLVTLPSKF 674


>Glyma04g36150.1 
          Length = 1495

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 167/330 (50%), Gaps = 39/330 (11%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +P++ L+ENV + + F+KG   R  L  LL+M YQ R GI+ AGAYG+ Q R 
Sbjct: 1189 LSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRK 1248

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGV-IPVEFVINTVAYNEGHNEQLQRKLLLEDAIS 119
            R FIW A+P + LP++P P H      + I +   +   A     N    R + ++D I 
Sbjct: 1249 RAFIWAASPEDVLPEWPEPMHVFSAPELKITLSENVQYAAVRSTANGAPLRSITVQDTIG 1308

Query: 120  DLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNADD 179
            DLP + N   +  M+Y   P + FQK IR    +M+          +L DH S ++N  +
Sbjct: 1309 DLPAVGNGASKGNMEYQNDPVSWFQKKIR---GDMV----------VLTDHISKEMNELN 1355

Query: 180  YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSS 239
              R  +IPK+ G  +RDLP  +++               L +G+  V D     +  T+ 
Sbjct: 1356 LIRCQKIPKRPGADWRDLPEEKIK---------------LSTGQ--VVDLIPWCLPNTAK 1398

Query: 240  KP------FARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKL 291
            +       F RL W    PT +T  +P  +     HP+QDR+L++RE AR QGFPD Y+ 
Sbjct: 1399 RHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQF 1458

Query: 292  CGPVKQRYIQVGNAVAVPVARALGYTLGLA 321
             G +  ++ Q+GNAV  P+A ALG  L  A
Sbjct: 1459 AGNIIHKHRQIGNAVPPPLASALGRKLKEA 1488


>Glyma06g18790.1 
          Length = 1482

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 166/330 (50%), Gaps = 39/330 (11%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +P++ L+ENV + + F+KG   R  L  LL+M YQ R GI+ AGA+G+ Q R 
Sbjct: 1176 LSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRK 1235

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGV-IPVEFVINTVAYNEGHNEQLQRKLLLEDAIS 119
            R FIW A+P + LP++P P H      + I +   +   A     N    R + + D I 
Sbjct: 1236 RAFIWAASPEDVLPEWPEPVHVFSAPELKITLSENVQYAAVRSTANGAPLRAITVRDTIG 1295

Query: 120  DLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNADD 179
            DLP + N   +  M+Y   P + FQK IR    +M+          +L DH S ++N  +
Sbjct: 1296 DLPAVGNGASKGNMEYQNDPVSWFQKKIR---GDMV----------VLTDHISKEMNELN 1342

Query: 180  YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSS 239
              R  +IPK+ G  +RDLP  +++               L SG+  V D     +  T+ 
Sbjct: 1343 LIRCQKIPKRPGADWRDLPEEKIK---------------LSSGQ--VVDLIPWCLPNTAK 1385

Query: 240  KP------FARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKL 291
            +       F RL W    PT VT  +P  +     HP+QDR+L++RE AR QGFPD Y+ 
Sbjct: 1386 RHNQWKGLFGRLDWQGNFPTSVTDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYEF 1445

Query: 292  CGPVKQRYIQVGNAVAVPVARALGYTLGLA 321
             G +  ++ Q+GNAV  P+A ALG  L  A
Sbjct: 1446 AGNIIHKHRQIGNAVPPPLASALGRKLKEA 1475


>Glyma01g36500.2 
          Length = 594

 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 86/97 (88%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           MDI+ +LKPK+ LMENVVDIL+FS G++GRYA+GRL+ MNYQ+R+G+MAAG+YGLPQFR+
Sbjct: 482 MDIIDFLKPKYVLMENVVDILKFSGGYLGRYAIGRLVAMNYQARMGMMAAGSYGLPQFRM 541

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINT 97
           RVF+WGA PTE+LP +PLPTH+V+ RG +P EF + T
Sbjct: 542 RVFLWGARPTEQLPPYPLPTHEVVSRGFVPTEFEVRT 578