Miyakogusa Predicted Gene

Lj0g3v0307769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307769.1 Non Chatacterized Hit- tr|I3SWY0|I3SWY0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.79,0,WD40
repeat-like,WD40-repeat-containing domain; seg,NULL; SUBFAMILY NOT
NAMED,NULL; NUCLEASE-RELATED,CUFF.20768.1
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g33000.1                                                       362   e-100
Glyma02g15500.1                                                       357   4e-99
Glyma02g15500.2                                                       343   6e-95
Glyma01g08210.1                                                       167   9e-42
Glyma07g14870.1                                                        67   2e-11
Glyma03g00470.1                                                        67   2e-11
Glyma04g06080.1                                                        49   3e-06

>Glyma07g33000.1 
          Length = 517

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/197 (87%), Positives = 181/197 (91%), Gaps = 1/197 (0%)

Query: 1   MPAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAA 60
           MPAKATLFDK CNPLLELGTGPYNTIRWNPKG+FLCLAGFGNLPGDMVFWDY DKKQL A
Sbjct: 297 MPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGA 356

Query: 61  TKVEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPES 120
           TK EWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKL+QADWKPES
Sbjct: 357 TKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPES 416

Query: 121 PSKFGDIAELIKSIDSVKLEDKKPSGQG-PKPTQASTKASSANPPAQKPAAYCPPLAKTA 179
           PSKFGDIAELIKS++ V+LEDKKPSGQG PK TQ STKASS NPP QKPAAY PP AK A
Sbjct: 417 PSKFGDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSTNPPTQKPAAYRPPHAKNA 476

Query: 180 AVIQAQLLGESPSETLS 196
           + IQA+L GE+P+E LS
Sbjct: 477 SAIQAELFGETPAEPLS 493


>Glyma02g15500.1 
          Length = 518

 Score =  357 bits (917), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 170/197 (86%), Positives = 179/197 (90%), Gaps = 1/197 (0%)

Query: 1   MPAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAA 60
           MPAKATLFDK CNPLLELGTGPYNTIRWNPKG+FLCLAGFGNLPGDMVFWDY DKKQL A
Sbjct: 297 MPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGA 356

Query: 61  TKVEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPES 120
           TK EWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKL+Q DWKPES
Sbjct: 357 TKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPES 416

Query: 121 PSKFGDIAELIKSIDSVKLEDKKPSGQG-PKPTQASTKASSANPPAQKPAAYCPPLAKTA 179
           P KFGDIAELIKS++ V+LEDKKPSGQG PK TQ STKASSANP  QKPAAY PP AK A
Sbjct: 417 PGKFGDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSANPTTQKPAAYRPPHAKNA 476

Query: 180 AVIQAQLLGESPSETLS 196
           + IQA+L GE+ +ETLS
Sbjct: 477 SAIQAELFGETTAETLS 493


>Glyma02g15500.2 
          Length = 510

 Score =  343 bits (881), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 163/187 (87%), Positives = 171/187 (91%), Gaps = 1/187 (0%)

Query: 1   MPAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAA 60
           MPAKATLFDK CNPLLELGTGPYNTIRWNPKG+FLCLAGFGNLPGDMVFWDY DKKQL A
Sbjct: 297 MPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGA 356

Query: 61  TKVEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPES 120
           TK EWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKL+Q DWKPES
Sbjct: 357 TKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPES 416

Query: 121 PSKFGDIAELIKSIDSVKLEDKKPSGQG-PKPTQASTKASSANPPAQKPAAYCPPLAKTA 179
           P KFGDIAELIKS++ V+LEDKKPSGQG PK TQ STKASSANP  QKPAAY PP AK A
Sbjct: 417 PGKFGDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSANPTTQKPAAYRPPHAKNA 476

Query: 180 AVIQAQL 186
           + IQA++
Sbjct: 477 SAIQAEV 483


>Glyma01g08210.1 
          Length = 223

 Score =  167 bits (422), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 86/139 (61%), Positives = 94/139 (67%), Gaps = 16/139 (11%)

Query: 1   MPAKATLFDKNCNPLLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAA 60
           MPAKAT+ DK CNPLLELG G YNTI WNPKG+FLCLAGFGNL G +            A
Sbjct: 99  MPAKATMLDKKCNPLLELGIGSYNTIHWNPKGKFLCLAGFGNLLGYI------------A 146

Query: 61  TKVEWSVTSEWSPDGCYFMTATTAPRLQVDNG--IKIFHYNGSLYFKKMFDKLFQADWKP 118
           TK EWSVTSEWS DGCYFMT TT PRLQVDNG  I + H    +Y       +   DWK 
Sbjct: 147 TKAEWSVTSEWSLDGCYFMTTTTTPRLQVDNGFFITMGHCTSRIYLTNCTRSI--VDWKL 204

Query: 119 ESPSKFGDIAELIKSIDSV 137
           ES S FGDIAELIKS++ V
Sbjct: 205 ESLSMFGDIAELIKSLNLV 223


>Glyma07g14870.1 
          Length = 718

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 15  LLELGTGPYNTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAATKVEWSVTSEWSPD 74
           L+ L     N + W+P GR++ LAG     G + F++  + + +A  +   +   EW P 
Sbjct: 507 LITLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPT 566

Query: 75  GCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPESPS 122
           G Y  TA T+   +++NG  I+ +NG   ++ + D  FQ  W+P  PS
Sbjct: 567 GRYVATAVTSVH-EMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPS 613


>Glyma03g00470.1 
          Length = 718

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 24  NTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAATKVEWSVTSEWSPDGCYFMTATT 83
           N + W+P GR++ LAG     G + F++  + + +A  +   +   EW P G Y  TA T
Sbjct: 516 NALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVT 575

Query: 84  APRLQVDNGIKIFHYNGSLYFKKMFDKLFQADWKPESPS 122
           +   +++NG  I+ +NG   ++ + D  FQ  W+P  PS
Sbjct: 576 SVH-EMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPS 613


>Glyma04g06080.1 
          Length = 698

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 24  NTIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAATKVEWSVTSEWSPDGCYFMTATT 83
           N + W+P GR++ LAG     G + F++  + K +A  +   +   EW P G Y  TA T
Sbjct: 504 NALFWSPAGRYIVLAGLKGFNGQLEFYNVDELKTMATAEHFMATDIEWDPTGRYVATAVT 563

Query: 84  APRLQVDNGIK-IFHYNGSLYFKK--MFDKLFQADWKPE-----SPSKFGDIAELIKSID 135
           +   +++NG   +F +  S+   +  +   L    W+P      +P K  +IA+ +K   
Sbjct: 564 SVH-EMENGFSMVFQWQTSISDSEGSLISGLDIFLWRPRPPSFLTPEKEEEIAKNLKKYS 622

Query: 136 SVKLEDKKPS 145
             + ED+  S
Sbjct: 623 IYEAEDQDVS 632