Miyakogusa Predicted Gene

Lj0g3v0307519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307519.1 Non Chatacterized Hit- tr|K4ALI6|K4ALI6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si039767,51.76,1e-18,DUF2348,Uncharacterised protein family
UPF0405; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.20747.1
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45450.1                                                       143   4e-35

>Glyma08g45450.1 
          Length = 260

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/90 (77%), Positives = 79/90 (87%), Gaps = 2/90 (2%)

Query: 2   KFASTMIDDICFLEFAANGSSNDVLDFLHYCQTLTS--EYGCTFIALDHKDIYLNGERPA 59
           KF S MIDDI FLE AANGSSNDVL+ +HYC TLTS  EYGC FIALDHKDIYLNG+R A
Sbjct: 132 KFISIMIDDISFLEVAANGSSNDVLNLVHYCHTLTSDSEYGCAFIALDHKDIYLNGDRTA 191

Query: 60  IILEIEYLADILVKAEPLATGLAKDMHWQI 89
           ++LE+E+LADILVKAEPLATGLAKD+H Q+
Sbjct: 192 VMLEMEFLADILVKAEPLATGLAKDVHGQL 221