Miyakogusa Predicted Gene

Lj0g3v0307219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307219.1 Non Chatacterized Hit- tr|I1M3U8|I1M3U8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,59.57,0.0000000000002, ,CUFF.20724.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g45020.1                                                       108   1e-24
Glyma12g12260.1                                                       107   3e-24
Glyma12g33000.2                                                        55   2e-08
Glyma13g37480.1                                                        50   4e-07

>Glyma06g45020.1 
          Length = 113

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 75/114 (65%), Gaps = 7/114 (6%)

Query: 1   MTTLVRNTTASISRRYRYELIGLQGKDKL-KSISYRRKRAKQRKIFLTTYTLSSLNG--F 57
           M+TLVRNTT + SRR RYEL+GLQGKDK+ KSISYRR+RAKQR+IFLTTY LSSLN   F
Sbjct: 1   MSTLVRNTTLTFSRRNRYELLGLQGKDKMVKSISYRRRRAKQRQIFLTTYKLSSLNSNTF 60

Query: 58  VEXXXXX---XXXXXXXXXXXXXXXXMFMRTGSFSRSCNSRSAISAKSPERKKS 108
            E                        MFMR GSF RSC+SRS ISA SP RK S
Sbjct: 61  GEPTQKPKLKLKKVAVKVKKIVASVLMFMRVGSF-RSCSSRSQISATSPNRKNS 113


>Glyma12g12260.1 
          Length = 112

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 73/111 (65%), Gaps = 6/111 (5%)

Query: 1   MTTLVRNTTASISRRYRYELIGLQGKDKL-KSISYRRKRAKQRKIFLTTYTLSSLNG--F 57
           M+TLVRN T + SRR RYEL+GLQGKDK+ KSISYRR+RAKQR+IFLTTY LSSLN   F
Sbjct: 1   MSTLVRNATLTFSRRNRYELLGLQGKDKMVKSISYRRRRAKQRQIFLTTYKLSSLNSNTF 60

Query: 58  VEXXXXXXXXXXXXXXXX--XXXXXMFMRTGSFSRSCNSRSAISAKSPERK 106
           VE                       MFMR GSF RSC SRS IS+ SP RK
Sbjct: 61  VEPQKPKLKLKKVAVKVKKIVTSVLMFMRVGSF-RSCGSRSQISSTSPNRK 110


>Glyma12g33000.2 
          Length = 190

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 33/43 (76%), Gaps = 2/43 (4%)

Query: 13 SRRYRYELIGLQGKDK-LKSISYRRKRAKQRKIFLTTYTLSSL 54
          SRRY+YE +G  G+D  L SISYRR RAKQRKIFLTTY L S 
Sbjct: 7  SRRYKYEALG-SGRDHILNSISYRRTRAKQRKIFLTTYQLDSF 48


>Glyma13g37480.1 
          Length = 102

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 4/58 (6%)

Query: 1  MTTLVRNTTASISRRYRYELIG---LQGKDK-LKSISYRRKRAKQRKIFLTTYTLSSL 54
          M T +R++T S SRRY+YE +G     G+D  LKSISYRR+RAKQRKIFLTTY L S 
Sbjct: 1  MATFLRSSTLSRSRRYKYETLGGVPSSGRDHILKSISYRRRRAKQRKIFLTTYKLDSF 58