Miyakogusa Predicted Gene

Lj0g3v0307159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307159.1 Non Chatacterized Hit- tr|B9TC41|B9TC41_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,84.48,6e-19,seg,NULL; DUF1218,Protein of unknown function
DUF1218,CUFF.20714.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38100.1                                                       228   3e-60
Glyma12g11100.1                                                       225   2e-59
Glyma12g32320.1                                                       225   2e-59
Glyma06g45730.1                                                       212   1e-55
Glyma15g06910.1                                                       167   4e-42
Glyma07g30620.1                                                       154   3e-38
Glyma08g06680.1                                                       149   1e-36
Glyma12g11090.1                                                       110   9e-25
Glyma12g11080.1                                                        99   1e-21
Glyma09g11430.1                                                        62   3e-10

>Glyma13g38100.1 
          Length = 158

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 115/158 (72%), Positives = 122/158 (77%), Gaps = 1/158 (0%)

Query: 1   MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
           M     IFLC L+V MD++AGILGIEAEIAQNKVKHLRLWIFEC++PSH AFM       
Sbjct: 1   MERGVGIFLCLLLVTMDISAGILGIEAEIAQNKVKHLRLWIFECKDPSHKAFMLGLAAAV 60

Query: 61  XXXXXXXXXXXXGGCNCLCSQ-ELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNH 119
                       GG NCLCSQ E  KASPNRQLSMACLILTW+VLAVGLSMLVIGTSSN+
Sbjct: 61  LLALAHVIVNLVGGFNCLCSQQEADKASPNRQLSMACLILTWVVLAVGLSMLVIGTSSNN 120

Query: 120 KSRGSCGFTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
           KS GSCGFTHHHFLS GGILCFVH LFSV YY SATAS
Sbjct: 121 KSNGSCGFTHHHFLSTGGILCFVHALFSVVYYVSATAS 158


>Glyma12g11100.1 
          Length = 160

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 124/160 (77%), Gaps = 1/160 (0%)

Query: 1   MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
           M   A IFLC LI++MDV AGILG EAEIAQNKVKHLRLWIFECREPSH AFM       
Sbjct: 1   MARVAGIFLCLLILVMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAV 60

Query: 61  XXXXXXXXXXXXGGCNCLCSQ-ELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNH 119
                       GGCNC+CSQ E +KAS NRQLS ACLILTW+VLA+GLSMLVIGT SN+
Sbjct: 61  LLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTACLILTWVVLAIGLSMLVIGTMSNN 120

Query: 120 KSRGSCGFTHHHFLSIGGILCFVHGLFSVAYYASATASIN 159
           +S GSCGF+HHHFLSIGGI CFVHGLF +AYY SATAS++
Sbjct: 121 RSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVSATASMD 160


>Glyma12g32320.1 
          Length = 158

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 115/158 (72%), Positives = 121/158 (76%), Gaps = 1/158 (0%)

Query: 1   MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
           M     IFLC L+V MD++AGILGIEAEIAQNKVKHLRLWIFEC++PSH AFM       
Sbjct: 1   MDRGVGIFLCLLLVTMDISAGILGIEAEIAQNKVKHLRLWIFECKDPSHKAFMLGLAAAV 60

Query: 61  XXXXXXXXXXXXGGCNCLCSQ-ELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNH 119
                       GG NCLCSQ E  KASPNRQLSMA LILTWIVLAVGLSMLVIGTSSN+
Sbjct: 61  LLALAHVIVNLVGGFNCLCSQPEADKASPNRQLSMASLILTWIVLAVGLSMLVIGTSSNN 120

Query: 120 KSRGSCGFTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
           KS GSCGFTHHHFLS GGILCFVH LFSV YY SATAS
Sbjct: 121 KSSGSCGFTHHHFLSTGGILCFVHALFSVVYYVSATAS 158


>Glyma06g45730.1 
          Length = 154

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/154 (68%), Positives = 118/154 (76%), Gaps = 1/154 (0%)

Query: 7   IFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXX 66
           +FLC LI+IMDV AGILG EAEIAQNKVKHLRLWIFECREP H  FM             
Sbjct: 1   MFLCLLILIMDVAAGILGFEAEIAQNKVKHLRLWIFECREPGHQTFMLGLGAAVLLGLAH 60

Query: 67  XXXXXXGGCNCLCSQ-ELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSC 125
                 GGCNC+ SQ E +KAS +RQLS ACLILTW+VLA+GLSMLVIGT SN++S  SC
Sbjct: 61  AITNLLGGCNCISSQQEFEKASSSRQLSTACLILTWVVLAIGLSMLVIGTMSNNRSDDSC 120

Query: 126 GFTHHHFLSIGGILCFVHGLFSVAYYASATASIN 159
           GF+HHHFLSIGGI CFVHGLF +AYY SATAS++
Sbjct: 121 GFSHHHFLSIGGICCFVHGLFCIAYYVSATASMD 154


>Glyma15g06910.1 
          Length = 175

 Score =  167 bits (423), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 83/158 (52%), Positives = 106/158 (67%), Gaps = 1/158 (0%)

Query: 1   MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
           M       +C L++++D+ AGILGIEAEIAQNK KH+ +WIFECR PS+ AF        
Sbjct: 1   MTKNYGFLICILVIVLDIVAGILGIEAEIAQNKEKHMWVWIFECRYPSYQAFKLGLAAAT 60

Query: 61  XXXXXXXXXXXXGGCNCLCSQE-LQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNH 119
                       GGC C+ S+E    A+ NR+L++A LI +W+VLAV LSML+IGT +N 
Sbjct: 61  FLALAHVIANLLGGCICVWSKEQYLSATANRKLAVAFLIFSWVVLAVALSMLMIGTLANS 120

Query: 120 KSRGSCGFTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
           +SR SCG    HFLSIGGILCF+HGLF+V YY SATA+
Sbjct: 121 RSRKSCGMFSRHFLSIGGILCFIHGLFTVPYYVSATAT 158


>Glyma07g30620.1 
          Length = 173

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 1/151 (0%)

Query: 8   FLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXXX 67
            +C L++++D+ AGILGI+AEIAQNKVK L++W  ECR+PS+ AF               
Sbjct: 8   LVCILVLVLDIAAGILGIQAEIAQNKVKDLKVWALECRDPSYEAFKLGVAASIFLVFAHA 67

Query: 68  XXXXXGGCNCLCS-QELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSCG 126
                G C C+ S +E Q A+ NR L++  LIL+WI+L +  S+L++G+S+N +SR SCG
Sbjct: 68  IAHLLGRCICMQSKEECQGATANRVLAVTFLILSWILLGIAFSLLILGSSANSRSRESCG 127

Query: 127 FTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
            ++  FLSIGGILCF+HGLF++ YY S TA+
Sbjct: 128 ISNRRFLSIGGILCFIHGLFTIGYYVSVTAT 158


>Glyma08g06680.1 
          Length = 168

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 102/151 (67%), Gaps = 1/151 (0%)

Query: 8   FLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXXXXXXXX 67
            +C  ++++D+ AGILGI+AE+AQNKVK L++W+ ECR+PS+ AF               
Sbjct: 8   LVCIFVLVLDIVAGILGIQAEMAQNKVKDLKVWVLECRDPSYEAFKLGLAASICLVFAHA 67

Query: 68  XXXXXGGCNCLCS-QELQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHKSRGSCG 126
                G C C+ S +E Q A+ N +L++A LIL+WI+L +  S+L+ G+ +N +SR SCG
Sbjct: 68  IAHLLGRCICMQSKEECQGATANGRLAVAFLILSWILLGIAFSLLIFGSLANSRSRESCG 127

Query: 127 FTHHHFLSIGGILCFVHGLFSVAYYASATAS 157
            ++  FLSIGGILCF+HGLF++ YY S TA+
Sbjct: 128 ISNRRFLSIGGILCFIHGLFTIGYYVSVTAT 158


>Glyma12g11090.1 
          Length = 150

 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 86/153 (56%), Gaps = 12/153 (7%)

Query: 2   RGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXXX 61
           R  A +FLC L +IMDV AGILG +A++AQNK  HL+LWI +CR  SH A+M        
Sbjct: 5   RITAGVFLCILNLIMDVIAGILGFQADVAQNK--HLKLWILQCRGTSHQAYMLGVSAAVF 62

Query: 62  XXXXXXXXXXXGGCNCLCSQE-LQKASPNRQLSMACLILTWIVLAVGLSMLVIGTSSNHK 120
                         N LC    + K S  +QL +  L+ TWI+  +GLS LV+G+ +N  
Sbjct: 63  LGVAHVIV------NFLCCLPCIVKTSFCKQLRVGFLLATWILCGIGLSTLVMGSKANKS 116

Query: 121 SRGSCGFTHHHFLSIGGILCFVHGLFSVAYYAS 153
           S   CGF+ +H L IGGI CF+H    + YY +
Sbjct: 117 SEDLCGFSDNHLLEIGGICCFIH---CILYYVT 146


>Glyma12g11080.1 
          Length = 123

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 1  MRGKASIFLCFLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECREPSHNAFMXXXXXXX 60
          M   A IFLC LI+I DVT  ILG E+EI QNKVKHLRLWIFECREPSH  FM       
Sbjct: 1  MARVAGIFLCLLILITDVTVRILGFESEITQNKVKHLRLWIFECREPSHQGFMLGLGAAV 60

Query: 61 XXXXXXXXXXXXGGCNCLCS-QELQKAS---PNRQL 92
                      GGCNC+CS QE +KAS   PN  L
Sbjct: 61 LLGLAHAIANLLGGCNCICSQQEFEKASNCLPNFNL 96


>Glyma09g11430.1 
          Length = 46

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 37/46 (80%)

Query: 106 VGLSMLVIGTSSNHKSRGSCGFTHHHFLSIGGILCFVHGLFSVAYY 151
           +  S+L+ G+ +N +SR SCG ++H FLSIGGILCF+HGLF++ YY
Sbjct: 1   IAFSLLIFGSLANSRSRESCGISNHWFLSIGGILCFIHGLFTIGYY 46