Miyakogusa Predicted Gene

Lj0g3v0307049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307049.1 tr|Q9SGX9|Q9SGX9_ARATH F20B24.14 OS=Arabidopsis
thaliana PE=4 SV=1,30.3,0.000000003,seg,NULL,CUFF.20701.1
         (299 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g20740.1                                                       105   6e-23
Glyma08g39060.1                                                        53   4e-07

>Glyma18g20740.1 
          Length = 225

 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 94/205 (45%), Gaps = 65/205 (31%)

Query: 1   MAGTLALVS--------MRDQWEISFARFIPYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 52
           MAG LA++         +R+QWEI FARFIPY                            
Sbjct: 1   MAGNLAVIEHSNKNSARLREQWEICFARFIPYPTLPPSSDLLPLPPRLRNLSPRGN---- 56

Query: 53  XXXWIXXXXXXAAFLRLSPDLSASDTILTVSFNSKHLEEHYVSKLLFSWPQVSCVPELPA 112
              WI       AFL     LS S  +LTVSFN+  LEEHYV+KL F+WPQVSCV   PA
Sbjct: 57  ---WISSSS--VAFL----RLSLSHLLLTVSFNAALLEEHYVTKLHFTWPQVSCVSGYPA 107

Query: 113 RGIRTVLVSYRDSAGE-------------------------------------------- 128
           RGIRTV+VSYRDS GE                                            
Sbjct: 108 RGIRTVIVSYRDSLGEARFLFFIFDSMQKLKLPKELAINFGLKINLQFETKHVKTFAYNH 167

Query: 129 IQKFALRFPSIYETQSFINALKEIL 153
           IQKFA+RFP+IYE +SFIN LK ++
Sbjct: 168 IQKFAMRFPTIYEAESFINVLKVMI 192


>Glyma08g39060.1 
          Length = 30

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 90  EEHYVSKLLFSWPQVSCVPELPARGIRTVL 119
           EEHYV+KL F+WPQVSCV   P RGIRTVL
Sbjct: 1   EEHYVTKLHFTWPQVSCVSGYPPRGIRTVL 30