Miyakogusa Predicted Gene

Lj0g3v0306839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306839.1 tr|G7JCK0|G7JCK0_MEDTR Ketol-acid
reductoisomerase OS=Medicago truncatula GN=MTR_4g079780 PE=4
SV=1,88.92,0,GB DEF: KETOL-ACID REDUCTOISOMERASE, CHLOROPLAST
PRECURSOR (EC 1.1.1.86) (ACETOHYDROXY-A,NULL; FAMIL,CUFF.20833.1
         (410 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g36730.1                                                       620   e-177
Glyma12g33760.1                                                       617   e-177
Glyma12g14420.1                                                       600   e-171
Glyma06g43550.2                                                       414   e-116
Glyma06g43550.1                                                       385   e-107
Glyma04g35250.1                                                       209   4e-54
Glyma07g28950.1                                                        90   4e-18
Glyma15g22080.1                                                        70   5e-12
Glyma18g42720.1                                                        60   3e-09

>Glyma13g36730.1 
          Length = 586

 Score =  620 bits (1598), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 313/397 (78%), Positives = 334/397 (84%), Gaps = 5/397 (1%)

Query: 18  QTLAKPAA-KCFAATNLSF----SKPSLRPLRAQRCVAVGTGALGARMVSAAPVASPAKL 72
           +TLAKPA+ + F+ATNL+     SK   + LR +RC A    ALGARMVS   V +PA L
Sbjct: 17  ETLAKPASTRTFSATNLALQSSSSKLGFKSLRLRRCAAASGSALGARMVSVPAVKAPALL 76

Query: 73  DFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRD 132
           DFDT +FKKE++NLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRD
Sbjct: 77  DFDTKVFKKEKINLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRD 136

Query: 133 SLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQA 192
           SLAEAKSDIVVKIGLRKGS SF EAR AGFSEENGTLGDI+ET+SGSDLV+LLISDSAQA
Sbjct: 137 SLAEAKSDIVVKIGLRKGSRSFAEARAAGFSEENGTLGDIWETVSGSDLVMLLISDSAQA 196

Query: 193 DNYEKIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQGK 252
           DNYEKI S MKPNSI                 DFPK+ SVIAVCPKGMGPSVRRLYVQGK
Sbjct: 197 DNYEKILSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGK 256

Query: 253 EINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGA 312
           EINGAGIN+SFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGA
Sbjct: 257 EINGAGINASFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGA 316

Query: 313 VHGIVESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFEK 372
           VHG+VESLFRRYTENGM EDLAYKNTVE              MLAVYN+ SE+ KREFEK
Sbjct: 317 VHGVVESLFRRYTENGMNEDLAYKNTVESITGIISKTISTKGMLAVYNALSEDEKREFEK 376

Query: 373 AYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           AYSASFYPCM+ILYECYEDVASGSEIRSVVLAGRRFY
Sbjct: 377 AYSASFYPCMEILYECYEDVASGSEIRSVVLAGRRFY 413


>Glyma12g33760.1 
          Length = 586

 Score =  617 bits (1591), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/396 (78%), Positives = 333/396 (84%), Gaps = 5/396 (1%)

Query: 19  TLAKPAA-KCFAATNLSF----SKPSLRPLRAQRCVAVGTGALGARMVSAAPVASPAKLD 73
           TLAKPA+ + F+ATNL+     SK   + L+  RC A    ALGARMVSA  V +PA LD
Sbjct: 18  TLAKPASTRTFSATNLALQSSSSKLGFKSLKLHRCAAAAGSALGARMVSAPAVKAPALLD 77

Query: 74  FDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDS 133
           FDT +FKKE++NLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDS
Sbjct: 78  FDTKVFKKEKINLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDS 137

Query: 134 LAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQAD 193
           LAEAKSDIVVKIGLRKGS SF EAR AGFSEENGTLGDI+ET+SGSDLV+LLISDSAQAD
Sbjct: 138 LAEAKSDIVVKIGLRKGSRSFAEARAAGFSEENGTLGDIWETVSGSDLVMLLISDSAQAD 197

Query: 194 NYEKIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQGKE 253
           NYEKI S MKPNSI                 DFPK+ SVIAVCPKGMGPSVRRLYVQGKE
Sbjct: 198 NYEKILSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKE 257

Query: 254 INGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAV 313
           INGAGIN+SFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAV
Sbjct: 258 INGAGINASFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAV 317

Query: 314 HGIVESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFEKA 373
           HG+VESLFRRYT+NGM EDLAYKNTVE              MLAVYN+ SE+ KREFEKA
Sbjct: 318 HGVVESLFRRYTDNGMNEDLAYKNTVESITGIISKTISTKGMLAVYNALSEDEKREFEKA 377

Query: 374 YSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           YSAS+YPCM+ILYECYEDVASGSEIRSVVLAGRRFY
Sbjct: 378 YSASYYPCMEILYECYEDVASGSEIRSVVLAGRRFY 413


>Glyma12g14420.1 
          Length = 576

 Score =  600 bits (1546), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/393 (76%), Positives = 324/393 (82%), Gaps = 12/393 (3%)

Query: 21  AKPAAK--CFAAT-NLSFSKPSLRPLRAQRCVAVGTGALGARMVSAAP-VASPAKLDFDT 76
           +KP A+  CF A   ++F K   +P        V    LGARMV+AAP V  PA LDF+T
Sbjct: 18  SKPVARRSCFVAVPKIAFPKLRFKP--------VAMATLGARMVAAAPTVTPPASLDFET 69

Query: 77  AIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAE 136
           ++FKKE++NLAGHDEYIVKGGRDLF LL  AFKGIKQIGVIGWGSQGPAQAQNLRDSLA+
Sbjct: 70  SVFKKEKINLAGHDEYIVKGGRDLFPLLQGAFKGIKQIGVIGWGSQGPAQAQNLRDSLAD 129

Query: 137 AKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQADNYE 196
           AKSDIVVK+GLRKGS SFNEAR AGFSEENGTLGDI+ETISGSDLVLLLISD+AQADNYE
Sbjct: 130 AKSDIVVKVGLRKGSRSFNEARAAGFSEENGTLGDIWETISGSDLVLLLISDAAQADNYE 189

Query: 197 KIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQGKEING 256
           KIFS MKPNSI                 DFPKHFSVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 190 KIFSHMKPNSILGLSHGFLLGHLQSIGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEING 249

Query: 257 AGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI 316
           AGINSSFAVHQDVDGRATDVAL WSVALGSPFTFAT+LE EY+SDIFGERGILLGAVHGI
Sbjct: 250 AGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATSLEMEYRSDIFGERGILLGAVHGI 309

Query: 317 VESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFEKAYSA 376
           VESLFRRYTE+GM+EDLAY NTVE              MLAVYN+ SE+ KREFEKAYSA
Sbjct: 310 VESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSEDEKREFEKAYSA 369

Query: 377 SFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           S+YPCMDILYECYED+A+GSEIRSVVLAGRRFY
Sbjct: 370 SYYPCMDILYECYEDIAAGSEIRSVVLAGRRFY 402


>Glyma06g43550.2 
          Length = 475

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/300 (72%), Positives = 229/300 (76%), Gaps = 25/300 (8%)

Query: 122 QGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIY-------- 173
           QGPAQAQNLRDSLA+AKSDIVVKIGLRKGS   NEAR AGFSEENGTLGDI+        
Sbjct: 32  QGPAQAQNLRDSLADAKSDIVVKIGLRKGSLLINEARAAGFSEENGTLGDIWVSEENGTL 91

Query: 174 ----ETISGSDLVLLLISDSAQADNYEKIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKH 229
               ETISGSDLVLLLISD+AQADNYEKIFS MKPNSI                 DFPKH
Sbjct: 92  GDIWETISGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSMGLDFPKH 151

Query: 230 FSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 289
           FSVIAVCPKGMGPSVRRLYVQGKEINGAGINS          RATDVAL WSVALGSPFT
Sbjct: 152 FSVIAVCPKGMGPSVRRLYVQGKEINGAGINSR------CGWRATDVALAWSVALGSPFT 205

Query: 290 FATTLEQEYKSDIFGERGILLGAVHGIVESLFRRYTENGMAEDLAYKNTVEXXXXXXXXX 349
           FATTLE EY+S       ILLGAVHGIVESLFRRYTE+GM+EDLAY NTVE         
Sbjct: 206 FATTLEMEYRS-------ILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKI 258

Query: 350 XXXXXMLAVYNSFSEEGKREFEKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
                MLAVYN+ SE+ KREFEKAYSAS+YPCMDI+YECYED+A+GSEIRSVVLAGR FY
Sbjct: 259 ISTKGMLAVYNALSEDEKREFEKAYSASYYPCMDIMYECYEDIAAGSEIRSVVLAGRCFY 318


>Glyma06g43550.1 
          Length = 488

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/400 (56%), Positives = 250/400 (62%), Gaps = 107/400 (26%)

Query: 24  AAKCFAAT-NLSFSKPSLRPLRAQRCVAVGTGALGARMVSAAP-VASPAKLDFDTAIFKK 81
           A  CF A  N +FSK + R     + VA+ T  LGARMV+AAP V  PA LDF++++FKK
Sbjct: 25  ARSCFVAVPNRAFSKLNFR----FKPVAMAT--LGARMVAAAPSVTPPASLDFESSVFKK 78

Query: 82  ERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDI 141
           E++NL+GHDE                               GPAQAQNLRDSLA+AKSDI
Sbjct: 79  EKINLSGHDE-------------------------------GPAQAQNLRDSLADAKSDI 107

Query: 142 VVKIGLRKGSSSFNEARGAGFSEENGTLGDIY------------ETISGSDLVLLLISDS 189
           VVKIGLRKGS   NEAR AGFSEENGTLGDI+            ETISGSDLVLLLISD+
Sbjct: 108 VVKIGLRKGSLLINEARAAGFSEENGTLGDIWVSEENGTLGDIWETISGSDLVLLLISDA 167

Query: 190 AQADNYEKIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYV 249
           AQ+                                DFPKHFSVIAVCPKGMGPSVRRLYV
Sbjct: 168 AQS-----------------------------MGLDFPKHFSVIAVCPKGMGPSVRRLYV 198

Query: 250 QGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL 309
           QGKEINGAGINSSFAVHQDVDG    + L W                          GIL
Sbjct: 199 QGKEINGAGINSSFAVHQDVDGGL--LMLLW-------------------------HGIL 231

Query: 310 LGAVHGIVESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKRE 369
           LGAVHGIVESLFRRYTE+GM+EDLAY NTVE              MLAVYN+ SE+ KRE
Sbjct: 232 LGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSEDEKRE 291

Query: 370 FEKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           FEKAYSAS+YPCMDI+YECYED+A+GSEIRSVVLAGR FY
Sbjct: 292 FEKAYSASYYPCMDIMYECYEDIAAGSEIRSVVLAGRCFY 331


>Glyma04g35250.1 
          Length = 184

 Score =  209 bits (532), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/158 (68%), Positives = 116/158 (73%), Gaps = 15/158 (9%)

Query: 254 INGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG--ILLG 311
           ING GINSSF VHQDVDGRATDVAL WSVALGSPFTFAT+LE EY+S IF ERG  ILL 
Sbjct: 1   INGVGINSSFLVHQDVDGRATDVALVWSVALGSPFTFATSLEMEYRSHIFRERGKSILLR 60

Query: 312 AVHGIVESLFRRYTENGMAEDLAYKNTVEXXXXXXXXXXXXXXMLAVYNSFSEEGKREFE 371
           AVHGIVESLFRRYTENGM+EDLAY NTVE              M             EFE
Sbjct: 61  AVHGIVESLFRRYTENGMSEDLAYNNTVEPITRTISKIISTKGM-------------EFE 107

Query: 372 KAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFY 409
           KAYSAS+Y CMDILY CYED+A+ S+IRSVVL GR FY
Sbjct: 108 KAYSASYYSCMDILYACYEDIAARSDIRSVVLDGRNFY 145


>Glyma07g28950.1 
          Length = 73

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/72 (63%), Positives = 46/72 (63%)

Query: 192 ADNYEKIFSSMKPNSIXXXXXXXXXXXXXXXXXDFPKHFSVIAVCPKGMGPSVRRLYVQG 251
           ADNYEKI S MKPN I                 DFPKHFSVI VCPK MG SVRR YVQG
Sbjct: 1   ADNYEKICSYMKPNRIPGLSHGFLLGHLQSMGLDFPKHFSVIIVCPKSMGLSVRRPYVQG 60

Query: 252 KEINGAGINSSF 263
           KEING  INSSF
Sbjct: 61  KEINGVVINSSF 72


>Glyma15g22080.1 
          Length = 49

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 42/49 (85%)

Query: 143 VKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQ 191
           ++IGL+KGS SFNEARGAGF+EENG L DI ++I  SD+VLL ISD+A+
Sbjct: 1   MEIGLKKGSPSFNEARGAGFTEENGILADICQSILSSDVVLLFISDAAE 49


>Glyma18g42720.1 
          Length = 177

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 5/57 (8%)

Query: 137 AKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQAD 193
           ++SDIVVK  L    +S+     AGFSEENGTLGDI+ET+S SD V+LLISDS Q +
Sbjct: 65  SRSDIVVK-WLNNCYNSW----AAGFSEENGTLGDIWETVSVSDPVILLISDSTQIE 116