Miyakogusa Predicted Gene
- Lj0g3v0306559.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0306559.1 tr|G7JYE2|G7JYE2_MEDTR Choline transporter-like
protein 5-A OS=Medicago truncatula GN=MTR_5g054780
P,88.7,0,CTL2-RELATED,NULL; CTL TRANSPORTER,Choline transporter-like;
Choline_transpo,Choline transporter-lik,CUFF.20662.1
(462 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g42290.1 704 0.0
Glyma20g24760.1 696 0.0
Glyma01g21270.3 550 e-156
Glyma01g21270.1 407 e-113
Glyma11g16250.1 124 2e-28
Glyma14g34650.1 110 4e-24
Glyma19g29550.1 80 6e-15
Glyma16g04000.1 79 1e-14
Glyma12g03550.1 55 1e-07
Glyma11g11380.1 55 1e-07
>Glyma10g42290.1
Length = 495
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/461 (73%), Positives = 378/461 (81%)
Query: 2 EQRRRWHDLFWLGLFVIQXXXXXXXXXXXXXNRFKKKDRLDIDKYTYRFMENQPGLTEDY 61
EQ RRWHD+FWLG+F+I NRF++++RL+IDKYT RF EN+ GLTE Y
Sbjct: 35 EQSRRWHDVFWLGIFLIHLIGMGFLMGVLGLNRFERENRLNIDKYTSRFSENESGLTETY 94
Query: 62 WPLYAVAGGVGTAXXXXXXXXXXXRAIQMMKVSVHILTTYLAVISVLCXXXXXXXXXXXX 121
WPLYA AGGVGT +A QMMKVSVHILTTYLAVISVLC
Sbjct: 95 WPLYAAAGGVGTFLGWSWLLLLGFQATQMMKVSVHILTTYLAVISVLCFWAGQIFWGVAF 154
Query: 122 XXXXXLQFLYVISVIDRLPFTMLVLQKAAKIVWNLPEVMRVAYAFLLAVLLWMALWSFGA 181
+QFLYVISVIDRLPFTMLVLQKA K+VWN+PEVMRVAYAF+ VLLWMALWSFGA
Sbjct: 155 AIGASIQFLYVISVIDRLPFTMLVLQKAVKMVWNIPEVMRVAYAFMFVVLLWMALWSFGA 214
Query: 182 AGVVASSMGDGGRWWXXXXXXXXXFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTN 241
AGVVASSMGDGGRWW FWTGAVLCNTVHV+VSG V LV HGG + AS+P N
Sbjct: 215 AGVVASSMGDGGRWWLLVVLSVSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDAASIPAN 274
Query: 242 SVLKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVET 301
S++KSLQYALTTSFGSICYGSLFTAAIRTLRWEIRG RSKIGNNECLLC VDFLFHLVET
Sbjct: 275 SLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCLVDFLFHLVET 334
Query: 302 LVRFFNKYAYVQIGVYGKSFNHSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLIT 361
LVRFFNKYAYVQI VYGKSFNHSARDAWELFQSTGVEA+VAYDCSGAVLLMGT+ GLIT
Sbjct: 335 LVRFFNKYAYVQIAVYGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLIT 394
Query: 362 GTCSGVWAWIKWRDRALMIGSTSMLMGMILVGVAMVLVESAVTSIYICYAEDPLLIQKWD 421
GTCSGVWAW+KW+DR +MIG T+MLMGM+LVG+AMV+VESAVTSIYICYAEDPLLIQ+WD
Sbjct: 395 GTCSGVWAWVKWKDRVIMIGYTTMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWD 454
Query: 422 PDFFNQISETLHQRLKYRSSRGKKVLTHNLLEGRTLENASM 462
+FFNQ+SETLHQRL+YRS+R ++VLTHN L+ +NAS+
Sbjct: 455 AEFFNQMSETLHQRLQYRSARAREVLTHNRLDDIVQQNASI 495
>Glyma20g24760.1
Length = 492
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/461 (72%), Positives = 374/461 (81%)
Query: 2 EQRRRWHDLFWLGLFVIQXXXXXXXXXXXXXNRFKKKDRLDIDKYTYRFMENQPGLTEDY 61
EQ RRWHD+FWLG+F+I NRF++++RL+IDKYT RF EN+ GLTE Y
Sbjct: 32 EQSRRWHDVFWLGIFLIHLIGLGFLMGVLGLNRFERENRLNIDKYTSRFSENESGLTETY 91
Query: 62 WPLYAVAGGVGTAXXXXXXXXXXXRAIQMMKVSVHILTTYLAVISVLCXXXXXXXXXXXX 121
WPLYA AGGVGT +A QMMKV+VHILTTYLAVISVLC
Sbjct: 92 WPLYAAAGGVGTVLGWSWLLLLGFQATQMMKVTVHILTTYLAVISVLCFWAGQIFWGVTF 151
Query: 122 XXXXXLQFLYVISVIDRLPFTMLVLQKAAKIVWNLPEVMRVAYAFLLAVLLWMALWSFGA 181
+QFLYVISVIDRLPFTMLVLQ A K+VWN+PEVMRVAYAF+ VLLWMALWSFGA
Sbjct: 152 AIGASIQFLYVISVIDRLPFTMLVLQNAVKMVWNIPEVMRVAYAFMFVVLLWMALWSFGA 211
Query: 182 AGVVASSMGDGGRWWXXXXXXXXXFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTN 241
AGVVASSMGDGGRWW FWTGAVLCNTVHV+VSG V LV HGG + S+P N
Sbjct: 212 AGVVASSMGDGGRWWLLVVLSMSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDGTSIPAN 271
Query: 242 SVLKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVET 301
S++KSLQYALTTSFGSICYGSLFTAAIRTLRWEIRG RSKIGNNECLLC VDFLFHLVET
Sbjct: 272 SLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCLVDFLFHLVET 331
Query: 302 LVRFFNKYAYVQIGVYGKSFNHSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLIT 361
LVRFFNKYAYVQI VYGKSFN SARDAWELFQSTGVEA+VAYDCSGAVLLMGT+ GLIT
Sbjct: 332 LVRFFNKYAYVQIAVYGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLIT 391
Query: 362 GTCSGVWAWIKWRDRALMIGSTSMLMGMILVGVAMVLVESAVTSIYICYAEDPLLIQKWD 421
GTCSGVWAW+KW DR +MIGST+MLMGM+LVG+AMV+VESAVTSIYICYAEDPLLIQ+WD
Sbjct: 392 GTCSGVWAWVKWSDRVIMIGSTTMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWD 451
Query: 422 PDFFNQISETLHQRLKYRSSRGKKVLTHNLLEGRTLENASM 462
+FFNQ+SETLHQRL+YRS+R ++VLTHN L+ +N S+
Sbjct: 452 AEFFNQMSETLHQRLQYRSARAREVLTHNRLDDIVRQNTSI 492
>Glyma01g21270.3
Length = 317
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/312 (85%), Positives = 285/312 (91%), Gaps = 1/312 (0%)
Query: 143 MLVLQKAAKIVWNLPEVMRVAYAFLLAVLLWMALWSFGAAGVVASSMGDGGRWWXXXXXX 202
MLVLQKA K+VWN+PEVMRVAYAF+L VLLWMALWSFGAAGVVASSMGDGGRWW
Sbjct: 1 MLVLQKAVKMVWNIPEVMRVAYAFMLVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVLS 60
Query: 203 XXXFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGS 262
FWTGAVLCNTVHVIVSGTVVLVSIHGG E S+P NS +K LQYALTTSFGSICYGS
Sbjct: 61 ISLFWTGAVLCNTVHVIVSGTVVLVSIHGGREAVSIPANSFMKCLQYALTTSFGSICYGS 120
Query: 263 LFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFN 322
LFTAAIRTLRWEIRGIRS+IGNNECLLCCVDF+FHLVETLVRFFNKYAYVQI VYGKSFN
Sbjct: 121 LFTAAIRTLRWEIRGIRSRIGNNECLLCCVDFVFHLVETLVRFFNKYAYVQIAVYGKSFN 180
Query: 323 HSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWAWIKWRDRALMIGS 382
SARDAWELFQSTGVE +VAYDCSGAVLLMGTI GLITGTCSGVWAWIKW DRA MIGS
Sbjct: 181 RSARDAWELFQSTGVETLVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIKWNDRAFMIGS 240
Query: 383 TSMLMGMILVGVAMVLVESAVTSIYICYAEDPLLIQKWDPDFFNQISETLHQRLKYRSSR 442
TSMLMGMILVGVAMV+VESAVTSIYICYAEDPLLIQ+WD +FFNQ+SETLHQRL++RSSR
Sbjct: 241 TSMLMGMILVGVAMVVVESAVTSIYICYAEDPLLIQRWDTEFFNQMSETLHQRLQHRSSR 300
Query: 443 G-KKVLTHNLLE 453
G ++VLTH+ L+
Sbjct: 301 GAREVLTHDQLD 312
>Glyma01g21270.1
Length = 1754
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/301 (68%), Positives = 222/301 (73%)
Query: 1 MEQRRRWHDLFWLGLFVIQXXXXXXXXXXXXXNRFKKKDRLDIDKYTYRFMENQPGLTED 60
MEQ+RRWHD+FWLG+FVI NRFK+K+RLDIDKYTYRFMEN+ GLTED
Sbjct: 1 MEQQRRWHDVFWLGIFVIHLVGMGLVLGVLGLNRFKQKNRLDIDKYTYRFMENEAGLTED 60
Query: 61 YWPLYAVAGGVGTAXXXXXXXXXXXRAIQMMKVSVHILTTYLAVISVLCXXXXXXXXXXX 120
YWPLYAVAGG+GTA RA QMMKVSVHILTTYLAVISVLC
Sbjct: 61 YWPLYAVAGGLGTALGWSWLLLLGSRATQMMKVSVHILTTYLAVISVLCFWAEQFFWGVA 120
Query: 121 XXXXXXLQFLYVISVIDRLPFTMLVLQKAAKIVWNLPEVMRVAYAFLLAVLLWMALWSFG 180
LQFLYVISVI+RLPFTMLVLQKA K+VWN+PEVMRVAYAF+L VLLWMALWSFG
Sbjct: 121 FAIGAALQFLYVISVIERLPFTMLVLQKAVKMVWNIPEVMRVAYAFMLVVLLWMALWSFG 180
Query: 181 AAGVVASSMGDGGRWWXXXXXXXXXFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPT 240
AAGVVASSMGDGGRWW FWTGAVLCNTVHVIVSGTVVLVSIHGG E S+P
Sbjct: 181 AAGVVASSMGDGGRWWLLVVLSISLFWTGAVLCNTVHVIVSGTVVLVSIHGGREAVSIPA 240
Query: 241 NSVLKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVE 300
NS +K LQYALTTSFGSICYGSLFTAAIRTLRWE+ R E L C + L + E
Sbjct: 241 NSFMKCLQYALTTSFGSICYGSLFTAAIRTLRWEMVSTRGMDARVEFLECRFEGLLAMRE 300
Query: 301 T 301
Sbjct: 301 N 301
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/127 (87%), Positives = 118/127 (92%)
Query: 313 QIGVYGKSFNHSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWAWIK 372
I VYGKSFN SARDAWELFQSTGVE +VAYDCSGAVLLMGTI GLITGTCSGVWAWIK
Sbjct: 1496 HIAVYGKSFNRSARDAWELFQSTGVETLVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIK 1555
Query: 373 WRDRALMIGSTSMLMGMILVGVAMVLVESAVTSIYICYAEDPLLIQKWDPDFFNQISETL 432
W DRA MIGSTSMLMGMILVGVAMV+VESAVTSIYICYAEDPLLIQ+WD +FFNQ+SETL
Sbjct: 1556 WNDRAFMIGSTSMLMGMILVGVAMVVVESAVTSIYICYAEDPLLIQRWDTEFFNQMSETL 1615
Query: 433 HQRLKYR 439
HQRL++R
Sbjct: 1616 HQRLQHR 1622
>Glyma11g16250.1
Length = 550
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 11/285 (3%)
Query: 130 LYVISVIDRLPFTMLVLQKAAKIVWNLPEVMRVAYAFLLAVLLWMALWSFGAAGVVASSM 189
LY V R+ F VL + + V P++ + Y L A LW++LW G +
Sbjct: 242 LYACWVSHRIKFCCKVLSLSLQPVSKFPDLSKPTYYVLGAGFLWISLWILAVIGALNFYF 301
Query: 190 GDGGRWWXXXXXXXXXFWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQY 249
WT V+ N V++ VS + L + G M +++ L+
Sbjct: 302 PP----LVIIALVLSLAWTTEVMRNVVNITVSRVIALYYLRG------MQSSTQFCFLR- 350
Query: 250 ALTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVETLVRFFNKY 309
ALT + GS C GSLF AI LR RG+ G +E + CC ++E++ R N +
Sbjct: 351 ALTRNLGSACLGSLFVPAIEALRIVARGLNLLEGEDEFMFCCAHCCLRVMESIFRNGNGW 410
Query: 310 AYVQIGVYGKSFNHSARDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWA 369
AYVQI YGK F +++D W LF+ + +IV D + ++ + +CSG + W
Sbjct: 411 AYVQIAAYGKGFVKASQDTWALFEKEDMVSIVDADITSSICFLTGVCSGSLCVIVVAAWT 470
Query: 370 WIKWRDRALMIGSTSMLMGMILVGVAMVLVESAVTSIYICYAEDP 414
+ + + + +G +L +AM + + V+ Y+CYAE P
Sbjct: 471 YKVHQTFTATLSLLTFFIGYLLTRIAMAVPHACVSCYYVCYAETP 515
>Glyma14g34650.1
Length = 77
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 58/69 (84%)
Query: 206 FWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFT 265
FWTGAVLCN VHV+VSG V LV HGG + S+ NS++KSLQYALTTSFGSICYGSLFT
Sbjct: 7 FWTGAVLCNIVHVVVSGMVFLVLFHGGRDGTSITANSLMKSLQYALTTSFGSICYGSLFT 66
Query: 266 AAIRTLRWE 274
AIRTLRWE
Sbjct: 67 VAIRTLRWE 75
>Glyma19g29550.1
Length = 336
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 207 WTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFTA 266
WT L N ++V +S V ++ GG + M T LT GS+ GS+
Sbjct: 104 WTMQFLKNAMYVTIS-RVKYMNFAGGVD---MDTRVAFCDTIKHLT---GSVSMGSILVP 156
Query: 267 AIRTLRWEIRGIRSKIGN-NECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFNHSA 325
I R R G+ +E + CV + LV N++ +V +GVY K F ++
Sbjct: 157 VIVLFRGFARTTSLVGGDTDEFMFSCVSCYMGVASFLVVRGNRWGFVHVGVYNKGFVQAS 216
Query: 326 RDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWAWIKWRDRALMIGSTSM 385
D WE+F G+E ++ D +GA + + +G I SG+W+ + + A + +
Sbjct: 217 TDTWEMFIRVGLEQLIDLDLTGAFCFLSGVGTGAICSLVSGIWSIVMHKSYATEVSIYAF 276
Query: 386 LMGMILVGVAMVLVESAVTSIYICYAEDP 414
L+G + +A+ V++ V++ Y+ YAE+P
Sbjct: 277 LIGYFICRLAIAWVQACVSAYYVAYAENP 305
>Glyma16g04000.1
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 207 WTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFTA 266
WT L N ++V +S V + GG + M T + LT GS+ GS+
Sbjct: 104 WTMQFLKNAMYVTIS-RVKYMHFAGGVD---MDTRVAVCDTIKHLT---GSVSMGSILVP 156
Query: 267 AIRTLRWEIRGIRSKIGN-NECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFNHSA 325
I R R G+ +E + CV + LV N++ +V +GVY K F ++
Sbjct: 157 VIVLFRGFARTTSLVGGDTDEFMFSCVSCYMGVASLLVVRGNRWGFVHVGVYNKGFVQAS 216
Query: 326 RDAWELFQSTGVEAIVAYDCSGAVLLMGTICSGLITGTCSGVWAWIKWRDRALMIGSTSM 385
D WE+F G+E ++ D +GA + + +G I SG+W+ + + A + +
Sbjct: 217 CDTWEMFIRVGLEQLIDLDLTGAFCFLSGVGTGAICSLVSGIWSIVMHKSYATEVSIYAF 276
Query: 386 LMGMILVGVAMVLVESAVTSIYICYAEDP 414
L+G + +A+ V++ V++ Y+ YAE+P
Sbjct: 277 LIGYFMCRLAIAWVQACVSAYYVAYAENP 305
>Glyma12g03550.1
Length = 552
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 207 WTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFTA 266
W+ A + ++SGT+ + S+ P S+ L+ S G+IC L
Sbjct: 313 WSAAAMVEAQVYVISGTI---ANWYFSKEHQTPKRSIRTPLRNVFGPSSGTICLSGLLVC 369
Query: 267 AIRTLRWEIRGIRSKIGN---NECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFNH 323
+R +R + R + N L CCV+ L T V F NK+ + G+++
Sbjct: 370 VVRMVRSAVDSARQEDTPGIVNLVLRCCVNALL----TAVDFLNKFTINFAAITGEAYCS 425
Query: 324 SARDAWELFQSTGVEAIVAYDCSGAVL--LMGTICSGLITGTCSGVWAWIKWRDRALMIG 381
SAR +EL + + A+ S +L ++ + C + A + +
Sbjct: 426 SARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTIVACVILKAGTNLGSDSYFVA 485
Query: 382 STSMLMGMILVGVAMVLVESAVTSIYICYAED 413
+ + ++ M+++G + ++++ + +IY+CYA D
Sbjct: 486 AMAWVLLMVVLGYLVHVLDNVIDTIYVCYAID 517
>Glyma11g11380.1
Length = 551
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 12/213 (5%)
Query: 206 FWTGAVLCNTVHVIVSGTVVLVSIHGGSEVASMPTNSVLKSLQYALTTSFGSICYGSLFT 265
W+ A + ++SGT+ S+ P S+ L+ A S G+IC L
Sbjct: 311 LWSAAAMVEAQVYVISGTIANWYF---SKEHQTPRRSIRTPLRNAFGPSSGTICLSGLLV 367
Query: 266 AAIRTLRWEIRGIRSKIGN---NECLLCCVDFLFHLVETLVRFFNKYAYVQIGVYGKSFN 322
+R +R + R + N L CCV+ L T V F NK+ + G+++
Sbjct: 368 CVVRMVRSAVDSARQEDTPGIVNLVLQCCVNALL----TAVDFLNKFTINFAAITGEAYC 423
Query: 323 HSARDAWELFQSTGVEAIVAYDCSGAVL--LMGTICSGLITGTCSGVWAWIKWRDRALMI 380
SAR +EL + + A+ S +L ++ + C + A + +
Sbjct: 424 SSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTIVACVILKAGTNLGSDSYFV 483
Query: 381 GSTSMLMGMILVGVAMVLVESAVTSIYICYAED 413
+ + ++ ++++G + ++++ + ++YICYA D
Sbjct: 484 AAMAWVLLIVVLGYLVHVLDNVIDTVYICYAID 516