Miyakogusa Predicted Gene

Lj0g3v0306399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306399.1 Non Chatacterized Hit- tr|I3T6Q6|I3T6Q6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.49,0,NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT,NULL;
NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RE,CUFF.20970.1
         (396 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g18950.2                                                       729   0.0  
Glyma13g18950.1                                                       712   0.0  

>Glyma13g18950.2 
          Length = 396

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/396 (86%), Positives = 375/396 (94%)

Query: 1   MQAMARRVVHQSLKPSTSLKSIYPISDHHYGADHERFVSTIATKGVGHLVRKGTGGRSSV 60
           MQ +ARR+  QSL+PSTSLKSIYPISDHHYG DHER+VST+ATKGVGHLVRKGTGGRSSV
Sbjct: 1   MQTIARRLGQQSLRPSTSLKSIYPISDHHYGMDHERYVSTLATKGVGHLVRKGTGGRSSV 60

Query: 61  SGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQVVPMKYNPR 120
           SGI+ATVFGATGFLGRYVVQ LAKMGSQVLVPFRGSED  RHLKLMGDLGQ+VPMKYNPR
Sbjct: 61  SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120

Query: 121 DESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHGGIMRFIQVSCL 180
           DESSVKAVMAKANVVINLIGRD+ETRNYS+E+VHYHMA+QLA+ISKEHGGI+RFIQVSCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180

Query: 181 GASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFLPLF 240
           GASPSSPSRMLR K+AAEE ILRELPEATILKPA MIGTEDRILN WAHFAKKY FLPLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240

Query: 241 GDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELMYEVIREWPR 300
           GDGSTKIQPVYV+DVA ALT+ LKDDGTSMGK+YELGGPE++T+HELA++M++ IREWPR
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300

Query: 301 YVKVPFPIAKALASPRELLINKLPFPLPTPNIFNLDQIRALTTDTVVSENALTFNDLGIN 360
           YVKVPFPIAKALA+PRE+L+NK+PFPLP P I NLD+I+ALTTDTVVSENALTFNDLGI 
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDLGIV 360

Query: 361 PQKLKGYPTEFLISYRKGGPQFGSTISERVSPDAWP 396
           P KLKGYP EFLISYRKGGPQFGSTISERV+PD+WP
Sbjct: 361 PHKLKGYPIEFLISYRKGGPQFGSTISERVTPDSWP 396


>Glyma13g18950.1 
          Length = 429

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/429 (79%), Positives = 375/429 (87%), Gaps = 33/429 (7%)

Query: 1   MQAMARRVVHQSLKPSTSLKSIYPISDHHYGADHERFVSTIATKGVGHLVRKGTGGRSSV 60
           MQ +ARR+  QSL+PSTSLKSIYPISDHHYG DHER+VST+ATKGVGHLVRKGTGGRSSV
Sbjct: 1   MQTIARRLGQQSLRPSTSLKSIYPISDHHYGMDHERYVSTLATKGVGHLVRKGTGGRSSV 60

Query: 61  SGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQVVPMKYNPR 120
           SGI+ATVFGATGFLGRYVVQ LAKMGSQVLVPFRGSED  RHLKLMGDLGQ+VPMKYNPR
Sbjct: 61  SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120

Query: 121 DESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHGGIMRFIQVSCL 180
           DESSVKAVMAKANVVINLIGRD+ETRNYS+E+VHYHMA+QLA+ISKEHGGI+RFIQVSCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180

Query: 181 GASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFLPLF 240
           GASPSSPSRMLR K+AAEE ILRELPEATILKPA MIGTEDRILN WAHFAKKY FLPLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240

Query: 241 GDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELMYEVIREWPR 300
           GDGSTKIQPVYV+DVA ALT+ LKDDGTSMGK+YELGGPE++T+HELA++M++ IREWPR
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300

Query: 301 YVKVPFPIAKALASPRELLINKLPFPLPTPNIFNLDQIRALTTDTVVSEN---------- 350
           YVKVPFPIAKALA+PRE+L+NK+PFPLP P I NLD+I+ALTTDTVVSEN          
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENGKFLYLIIRS 360

Query: 351 -----------------------ALTFNDLGINPQKLKGYPTEFLISYRKGGPQFGSTIS 387
                                  ALTFNDLGI P KLKGYP EFLISYRKGGPQFGSTIS
Sbjct: 361 FFFSRHYRTVSLMSHIFCLMKFAALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTIS 420

Query: 388 ERVSPDAWP 396
           ERV+PD+WP
Sbjct: 421 ERVTPDSWP 429