Miyakogusa Predicted Gene
- Lj0g3v0305019.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0305019.1 Non Chatacterized Hit- tr|J3MNQ6|J3MNQ6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G3,30.95,2e-18,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.20522.1
(224 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g03890.1 282 2e-76
Glyma02g44890.1 279 1e-75
Glyma08g41310.1 228 5e-60
Glyma08g41320.1 224 4e-59
Glyma18g14900.1 218 5e-57
>Glyma14g03890.1
Length = 219
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/229 (66%), Positives = 166/229 (72%), Gaps = 17/229 (7%)
Query: 1 MGNA---ACFQCXXXXXXXXXXVKLIFWEGTARSLKGRHIAGEIMFEFPDMMVCHADSFF 57
MGNA CFQ VKLIFWEGT+RSLKG+HIAGEIMFEFP+MMVCHADSFF
Sbjct: 1 MGNALKTPCFQLNTNSSSSSKSVKLIFWEGTSRSLKGKHIAGEIMFEFPEMMVCHADSFF 60
Query: 58 IGHPIPALSIDDQLMPGQTYFVIPXXXXXXXXXXXXXXXXXXXXXXXXXXNNINKSPIKF 117
IG PIP LSIDD+LMPGQTYFV+P NKSPIKF
Sbjct: 61 IGQPIPVLSIDDKLMPGQTYFVLPIDLFACNNLTVASISALGSCP--------NKSPIKF 112
Query: 118 GSCPFQYLKGSDGRVLIKVMPEFITSLINKGISNNNGTLGS--GSPSS-LCSTPELQKHY 174
G+CPFQYLKGSDGRV IKVMPEFIT LI+ G N N +G+ GSPSS LCSTPELQKHY
Sbjct: 113 GACPFQYLKGSDGRVAIKVMPEFITRLISGGDHNKNNGVGATPGSPSSFLCSTPELQKHY 172
Query: 175 EQLVKSKNQVWSPKLETISEYKIRFSVSPCRYIGTLEWKEKEKSEDVLT 223
EQLVKSK+QVWSPKLETISEYKIRF SPCR+IG LEWKEKEK ++ T
Sbjct: 173 EQLVKSKDQVWSPKLETISEYKIRF--SPCRFIG-LEWKEKEKPVEMFT 218
>Glyma02g44890.1
Length = 220
Score = 279 bits (714), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/231 (65%), Positives = 167/231 (72%), Gaps = 18/231 (7%)
Query: 1 MGNA---ACFQCXXXXXXXXXXVKLIFWEGTARSLKGRHIAGEIMFEFPDMMVCHADSFF 57
MGN+ CFQ VKLIFWEGT+RSLKG+HIAGEIMFEFP+MMVCHADSFF
Sbjct: 1 MGNSLKTPCFQLNTNSSSSSKSVKLIFWEGTSRSLKGKHIAGEIMFEFPEMMVCHADSFF 60
Query: 58 IGHPIPALSIDDQLMPGQTYFVIPXXXXXXXXXXXXXXXXXXXXXXXXXXNNINKSPIKF 117
IG PIP LSIDD+LMPGQTYF++P NKSPIKF
Sbjct: 61 IGQPIPVLSIDDKLMPGQTYFILPIDLFACNNLTVASISSLGSCP--------NKSPIKF 112
Query: 118 GSCPFQYLKGSDGRVLIKVMPEFITSLINKG--ISNNNGTLGS-GSPSS-LCSTPELQKH 173
G+CPF+YLKGSDGRV IKVMPEFIT LI G NNN +G+ GSPSS LCSTPELQKH
Sbjct: 113 GACPFEYLKGSDGRVAIKVMPEFITRLITGGDQKENNNNIVGTPGSPSSFLCSTPELQKH 172
Query: 174 YEQLVKSKNQVWSPKLETISEYKIRFSVSPCRYIGTLEWKEKEKSEDVLTR 224
YEQLVKSK+QVWSPKLETISEYKIRF SPCR+IG LEWKEKEK ++ TR
Sbjct: 173 YEQLVKSKDQVWSPKLETISEYKIRF--SPCRFIG-LEWKEKEKPVEMFTR 220
>Glyma08g41310.1
Length = 214
Score = 228 bits (580), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 149/220 (67%), Gaps = 11/220 (5%)
Query: 1 MGNAACFQCXX-XXXXXXXXVKLIFWEGTARSLKGRHIAGEIMFEFPDMMVCHADSFFIG 59
MGNAA C KLIFW+GT RSLKG+HIA EIMFEFP+ +VCHADSFFIG
Sbjct: 1 MGNAAVTPCFHPKNSSLSSSSKLIFWDGTMRSLKGKHIASEIMFEFPNKVVCHADSFFIG 60
Query: 60 HPIPALSIDDQLMPGQTYFVIPXXXXXXXXXXXXXXXXXXXXXXXXXXNNINKSPIKFGS 119
HPIPAL+++D+L+ G+ YFV+P NKS IKFG
Sbjct: 61 HPIPALALEDELIQGEAYFVLPIDSLITCKTLSVSSLLSLGSHTN------NKSTIKFGE 114
Query: 120 CPFQYLKGSDGRVLIKVMPEFITSLINKGISNNNGTLGSGSPSSLCSTPELQKHYEQLVK 179
C F+YLKGS+GRVLIKVMPEFIT LIN+ ++ + + LCSTPEL+KHY+ LVK
Sbjct: 115 CTFEYLKGSNGRVLIKVMPEFITRLINRSKRPCCPSINIDN-NFLCSTPELRKHYQMLVK 173
Query: 180 SKNQVWSPKLETISEYKIRFSVSPCRYIGTLEWKEKEKSE 219
K+QVWSPKLETISEYK++F SPCR+IG LE KEKEK+E
Sbjct: 174 PKDQVWSPKLETISEYKVKF--SPCRFIG-LERKEKEKAE 210
>Glyma08g41320.1
Length = 216
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 152/233 (65%), Gaps = 26/233 (11%)
Query: 1 MGNAA---CFQCXXXXXXXXXXVKLIFWEGTARSLKGRHIAGEIMFEFPDMMVCHADSFF 57
MGNAA CF KLIFW+GT RSLKG+HIA EIM EFP+ +VCHA+SFF
Sbjct: 1 MGNAAVTPCFHPKNSLLSSSSSSKLIFWDGTMRSLKGKHIASEIMLEFPNKVVCHANSFF 60
Query: 58 IGHPIPALSIDDQLMPGQTYFVIPXXXXXXXXXXXXXXXXXXXXXXXXXXNNINKSPIKF 117
IGHPIPAL+++D+L+ G+ YFV+P NKS IKF
Sbjct: 61 IGHPIPALALEDELIQGEAYFVLPIDSFTCKTLSVSSLLSLGSHPN-------NKSTIKF 113
Query: 118 GSCPFQYLKGSDGRVLIKVMPEFITSLINKGISNNNGTLGSGSPSS------LCSTPELQ 171
G C F+YLKGS+GR+LIKV PEFITSL+N+ + PSS LCSTPEL+
Sbjct: 114 GECAFEYLKGSNGRMLIKVTPEFITSLVNR-------SKRPCCPSSNVDNNFLCSTPELR 166
Query: 172 KHYEQLVKSKNQVWSPKLETISEYKIRFSVSPCRYIGTLEWKEKEKSEDVLTR 224
KHY+ LVKSK+QVWSPKLETISEYK++F SP R+IG LE KEKEK+E V TR
Sbjct: 167 KHYQMLVKSKDQVWSPKLETISEYKVKF--SPGRFIG-LERKEKEKAEVVSTR 216
>Glyma18g14900.1
Length = 197
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 142/214 (66%), Gaps = 24/214 (11%)
Query: 1 MGNAACFQCXX-XXXXXXXXVKLIFWEGTARSLKGRHIAGEIMFEFPDMMVCHADSFFIG 59
MGNAA C KLIFW+GT R LKG+HIAGEIM+EFPD +VCHADSFFIG
Sbjct: 1 MGNAAVTPCFHPKNSSSSSSSKLIFWDGTMRCLKGKHIAGEIMYEFPDKVVCHADSFFIG 60
Query: 60 HPIPALSIDDQLMPGQTYFVIPXXXXXXXXXXXXXXXXXXXXXXXXXXNNINKSPIKFGS 119
HPIPAL+++D+L+ G+ YFV+P ++ +KS IKFG
Sbjct: 61 HPIPALALEDELIQGEAYFVLP--------IDSFTCKTLSISSLLSLGSDPSKSTIKFGE 112
Query: 120 CPFQYLKGSDGRVLIKVMPEFITSLINKG------ISNNNGTLGSGSPSSLCSTPELQKH 173
CPF+YLKGS+GRVLIKVMPEFIT LIN+ SN+N LCSTPEL+KH
Sbjct: 113 CPFEYLKGSNGRVLIKVMPEFITRLINRSKRPCCPSSNDNNNF-------LCSTPELRKH 165
Query: 174 YEQLVKSKNQVWSPKLETISEYKIRFSVSPCRYI 207
Y+ LVKSK+QVWSPKLETISE K+RF SPCR+I
Sbjct: 166 YQMLVKSKDQVWSPKLETISENKVRF--SPCRFI 197