Miyakogusa Predicted Gene

Lj0g3v0304929.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304929.3 tr|F2D4L1|F2D4L1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,65.28,9e-19,Got1,Vesicle
transport protein, Got1/SFT2-like; UNCHARACTERIZED,Vesicle transport
protein, SFT2-like,CUFF.20515.3
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g16660.1                                                       122   8e-29
Glyma19g16660.2                                                       122   9e-29
Glyma16g33260.1                                                        95   1e-20
Glyma09g28470.1                                                        94   4e-20
Glyma09g28470.2                                                        80   7e-16

>Glyma19g16660.1 
          Length = 161

 Score =  122 bits (306), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/68 (88%), Positives = 66/68 (97%)

Query: 1   MLLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVV 60
           MLLS+IVFAKPIKFA LFTFG+LLAVGSTAFLLGPAQQL MM+DPVRVFATAI+LGCVV+
Sbjct: 50  MLLSMIVFAKPIKFAALFTFGNLLAVGSTAFLLGPAQQLGMMVDPVRVFATAIYLGCVVI 109

Query: 61  ALICALWV 68
           ALICALW+
Sbjct: 110 ALICALWI 117


>Glyma19g16660.2 
          Length = 136

 Score =  122 bits (306), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 60/68 (88%), Positives = 66/68 (97%)

Query: 1   MLLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVV 60
           MLLS+IVFAKPIKFA LFTFG+LLAVGSTAFLLGPAQQL MM+DPVRVFATAI+LGCVV+
Sbjct: 50  MLLSMIVFAKPIKFAALFTFGNLLAVGSTAFLLGPAQQLGMMVDPVRVFATAIYLGCVVI 109

Query: 61  ALICALWV 68
           ALICALW+
Sbjct: 110 ALICALWI 117


>Glyma16g33260.1 
          Length = 178

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 60/71 (84%)

Query: 2   LLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVVA 61
           LLS++VF KPIKFA+ FT G+LL++GSTAFL+GP +Q+ MMLDPVR++ATAI++  +++A
Sbjct: 68  LLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYIASMIIA 127

Query: 62  LICALWVSPAL 72
           L CAL+V   L
Sbjct: 128 LFCALYVHNKL 138


>Glyma09g28470.1 
          Length = 178

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 59/71 (83%)

Query: 2   LLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFLGCVVVA 61
           LLS++VF KPIKFA+ FT G+LL++GSTAFL+GP +Q+ MMLDP R++ATAI++  +++A
Sbjct: 68  LLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPARIYATAIYIASMIIA 127

Query: 62  LICALWVSPAL 72
           L CAL+V   L
Sbjct: 128 LFCALYVHNKL 138


>Glyma09g28470.2 
          Length = 124

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 48/54 (88%)

Query: 2   LLSLIVFAKPIKFALLFTFGHLLAVGSTAFLLGPAQQLQMMLDPVRVFATAIFL 55
           LLS++VF KPIKFA+ FT G+LL++GSTAFL+GP +Q+ MMLDP R++ATAI++
Sbjct: 68  LLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPARIYATAIYI 121