Miyakogusa Predicted Gene
- Lj0g3v0304709.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304709.2 tr|G7JF23|G7JF23_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_4g081270 PE=4 SV,39.07,7e-19,
,CUFF.20585.2
(184 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g43850.1 120 7e-28
Glyma06g42730.1 107 6e-24
Glyma12g15860.2 92 3e-19
Glyma12g15830.2 92 4e-19
Glyma06g40690.1 84 8e-17
Glyma06g40950.1 82 5e-16
Glyma06g40740.1 81 5e-16
Glyma06g40710.1 81 5e-16
Glyma06g39960.1 80 1e-15
Glyma06g40980.1 78 6e-15
Glyma12g15960.1 75 4e-14
Glyma06g40780.1 74 9e-14
Glyma06g41290.1 72 3e-13
Glyma06g41380.1 71 6e-13
Glyma12g16450.1 66 2e-11
Glyma06g41240.1 55 3e-08
>Glyma06g43850.1
Length = 1032
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Query: 14 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 73
I IV+PG +IP+WF+ Q+VG SI +D SP+M +WIG+ACC FV D T+L+ + S
Sbjct: 852 IDIVVPGNQIPKWFNNQSVGTSISLDPSPIMHGNHWIGIACCVVFVAFDDATDLHPNLRS 911
Query: 74 ---LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRERLINSNQL--------VEF 122
+ + + S +IPI KDLVTV H+ LLY +RE + ++ ++
Sbjct: 912 SIRIGFKTESYSSSLDIPILINKDLVTVGLHHLWLLYLSREEFFSYFKIEKMLDLHGIKM 971
Query: 123 VSIDTHPQELHVEVKKCGYKWVYEEDLDQLIHSMEHNG 160
S H Q L++EV CGY+WV++EDLD L ++ G
Sbjct: 972 QSTVWHSQGLNLEVHGCGYQWVFKEDLDTLNLTIMRRG 1009
>Glyma06g42730.1
Length = 774
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 17 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLND-----PI 71
VIPG +IPRWF +QNVG+SI +D S V+ + G+ACC FV H DP N D P
Sbjct: 610 VIPGTKIPRWFIKQNVGSSISMDLSRVIEDLYCRGVACCAIFVAHDDPNNNFDNWRGPPY 669
Query: 72 YSLFYWLKHERD----SYEIPIHFRKDLVTVEFDHMVLLYFTRERL-----INSNQL--V 120
+ + ++ + ++ +PI F++ LVTV FDH+++++F+RE L + SN L V
Sbjct: 670 DYIEFGFENLTNMCSLTFPVPILFKRALVTVGFDHLLIMFFSRELLTDLARVRSNGLDTV 729
Query: 121 EFVSIDTHP--QELHVEVKKCGYKWVYEEDLDQLIHSMEHNGNSS 163
+FV+ ++ P + L +EVK CGY ++E+ L + +M +GNSS
Sbjct: 730 KFVA-NSGPYYEGLRLEVKSCGYHLLFEDHLQRFKSNMMFSGNSS 773
>Glyma12g15860.2
Length = 608
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 73/138 (52%), Gaps = 29/138 (21%)
Query: 14 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 73
+ IVIPG EIPRWFS+QN G+SI +D SPVM N NWIG+ACC V DP+N+ +
Sbjct: 410 LNIVIPGTEIPRWFSKQNEGDSISMDPSPVMDNPNWIGVACCALLVALHDPSNIGN---- 465
Query: 74 LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRER--LINSNQLVEFVSIDT---- 127
W +P F E DH+++L+ +RE L S + +DT
Sbjct: 466 --RW-------RNLPFDFGS-----ELDHLLILFASREGFLLFPSEDETDMHGLDTRGFT 511
Query: 128 -----HPQELHVEVKKCG 140
HP+ L ++VK CG
Sbjct: 512 TSIYDHPKGLRMQVKSCG 529
>Glyma12g15830.2
Length = 841
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 29/137 (21%)
Query: 14 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 73
+ IVIPG EIPRWFS+QN G+SI +D SP+M + NWIG+ACC V H DP+N+ +
Sbjct: 641 LDIVIPGTEIPRWFSKQNEGDSISMDPSPLMEDPNWIGVACCALLVAHHDPSNIGNRSTH 700
Query: 74 LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRER-LINSNQLVEFVSIDT----- 127
L D E DH+++L+ +RE L+ + +DT
Sbjct: 701 L-------------------DHYPSELDHLLILFASREEFLLFPRHETDMHGLDTRGFTT 741
Query: 128 ----HPQELHVEVKKCG 140
HP+ L ++VK CG
Sbjct: 742 WIRDHPKGLRLQVKSCG 758
>Glyma06g40690.1
Length = 1123
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 17 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDP--------TNLN 68
V PG EIPRWF+ ++ GN + +D+SPVM + NWIG+A C FV + T N
Sbjct: 932 VSPGSEIPRWFNNEHEGNCVNLDASPVMHDHNWIGVAFCAIFVVPHETLSAMSFSETEWN 991
Query: 69 DPIYSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLINS-------- 116
P++ +IP+ F +D LV + DHM L Y R I
Sbjct: 992 YPVFG------------DIPVDFYEDVDLELVLDKSDHMCLFYVDRHDFIADFHLDDKYL 1039
Query: 117 NQLVEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 151
+L+ +E + EVKK GY+WVY+ DL+Q
Sbjct: 1040 GRLLLKCDEGIGFKESYAEVKKYGYRWVYKGDLEQ 1074
>Glyma06g40950.1
Length = 1113
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 15 QIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYSL 74
++V PG EIPRWF+ ++ GN + +D+SPVM + NWIG+A C FV + + S
Sbjct: 960 RVVSPGSEIPRWFNNEHEGNCVSLDASPVMHDHNWIGVAFCAIFVVPHETLS----AMSF 1015
Query: 75 FYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLIN---------SNQLVE 121
+ D +IP+ F +D LV + DHM L + R R I L++
Sbjct: 1016 SETEGNYPDYNDIPVDFYEDVDLELVLDKSDHMWLFFVGRGRFIEYFHLKHKYLGRLLLK 1075
Query: 122 FVSIDTHPQELHVEVKKCGYKWVYEEDLD 150
+ +E + EVKK GY+WVY+ D++
Sbjct: 1076 CDNEGIRFKESYAEVKKYGYRWVYKGDIE 1104
>Glyma06g40740.1
Length = 1202
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 17 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVT-HKDPTNL----NDPI 71
V PG EIP+WF+ Q+ GN + +D+S VM + NWIG+A C FV H+ + + D
Sbjct: 1022 VSPGSEIPKWFNNQHEGNCVSLDASHVMHDDNWIGVAFCAIFVVPHETISAMAFSKTDGY 1081
Query: 72 YSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLI--------NSNQL 119
YS F +IP+ F +D LV + DHM L +F R+ I N +L
Sbjct: 1082 YSGF---------SDIPVDFYEDLDQELVLDKSDHMWLFFFDRKMFIFKFHLQPENLGRL 1132
Query: 120 VEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 151
+ +E + EVKK GY+WVY+ D +Q
Sbjct: 1133 LLKCDGRRKWKESYAEVKKYGYRWVYKGDNEQ 1164
>Glyma06g40710.1
Length = 1099
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 18/147 (12%)
Query: 17 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVT-HKDPTNLNDPIYSLF 75
V PG EIPRWF+ ++ GN + +D+SPVM ++NWIG+A C FV H+ + F
Sbjct: 948 VTPGSEIPRWFNNEHEGNCVSLDASPVMHDRNWIGVAFCAIFVVPHETLLAMG------F 1001
Query: 76 YWLKHERDSY-EIPIHFRKD----LVTVEFDHMVLLYFTRERLINS-----NQLVEFVS- 124
K R + +I + F D LV + DHM L + R +I L +VS
Sbjct: 1002 SNSKGPRHLFGDIRVDFYGDVDLELVLDKSDHMCLFFLKRHDIIADFHLKHRYLGRWVSR 1061
Query: 125 IDTHPQELHVEVKKCGYKWVYEEDLDQ 151
D +E + EVKK GY+WVY+ D++Q
Sbjct: 1062 YDGVLKESYAEVKKYGYRWVYKGDIEQ 1088
>Glyma06g39960.1
Length = 1155
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 27/156 (17%)
Query: 14 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDP------TNL 67
IQ V G EIPRWF+ Q+ GN + +D+SPVM + NWIG+A C FV + ++
Sbjct: 954 IQSVTTGSEIPRWFNNQHEGNCVSLDASPVMHDHNWIGVAFCLMFVVPHETLSAMGFSDS 1013
Query: 68 NDPIYSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRE--------RLIN 115
+ P + F +IP+ F D LV + DHM L + +R +L
Sbjct: 1014 DCPPWHFF---------GDIPVDFYGDLDLELVLDKSDHMWLFFVSRTQFSRQFPLKLKY 1064
Query: 116 SNQLVEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 151
+LV E + EVKK GY+WVY+ED ++
Sbjct: 1065 LGRLVLKCDKRMGWSESYAEVKKYGYRWVYKEDKEE 1100
>Glyma06g40980.1
Length = 1110
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 17 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYSLFY 76
V PG EIPRWF+ ++ GN + +D+ PVM + NWIG+A C FV + S
Sbjct: 946 VSPGSEIPRWFNNEHEGNCVSLDACPVMHDHNWIGVAFCAIFVVPHE-------TLSAMC 998
Query: 77 WLKHER---DSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLINSNQLVE------FV 123
+ + ER D +I + F D LV + DHM L R I L +
Sbjct: 999 FSETERIYPDFGDILVDFYGDVDLELVLDKSDHMCLFLVKRMDFIYHFHLKHKYLGRLVL 1058
Query: 124 SIDTHPQELHVEVKKCGYKWVYEEDLD 150
D +E + EVKK GY+W+YEED++
Sbjct: 1059 ECDDEWKESYAEVKKYGYRWLYEEDIE 1085
>Glyma12g15960.1
Length = 791
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 11 LVPIQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDP 70
L + I+IPG +IP+WF++QN +SI +D PVM + N IG+ACC FVTH DP+NL D
Sbjct: 681 LGKMDIIIPGTQIPKWFNKQNSSSSISMDPFPVMDDPNLIGVACCVLFVTHDDPSNLGDR 740
Query: 71 IY-----SLFYWLKHERDSYEIPIHFRKDLVTVEFDHMV 104
+ S Y +++++ + +DL T+EF ++
Sbjct: 741 WHPCDCPSFGYGVRNKQLELSECSNEMQDLDTMEFAPLI 779
>Glyma06g40780.1
Length = 1065
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 14 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 73
I+ V PG EI RW + ++ GN + +D+SPVM + NWIG+A C FV + L+ +S
Sbjct: 909 IESVSPGSEIRRWLNNEHEGNCVSLDASPVMHDHNWIGVAFCAIFVVPHE--TLSAMSFS 966
Query: 74 LFYWLKHERDSYEIPIHFRKDLVTV--EFDHMVLLYFTRERLI-----NSNQLVEFVS-I 125
+ H + ++ DL V + DHM L + R +I L VS
Sbjct: 967 ETEYPFHLFGDIRVDLYGDLDLELVLDKSDHMWLFFVNRHDIIADFHLKDKYLGRLVSRY 1026
Query: 126 DTHPQELHVEVKKCGYKWVYEEDLDQLIH 154
D +E + EVKK GY+W+Y+ D++Q H
Sbjct: 1027 DGVLKESYAEVKKYGYRWLYKGDIEQRKH 1055
>Glyma06g41290.1
Length = 1141
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 34/155 (21%)
Query: 1 MQSSFSSWVPLVP-IQIVIPGGEIPRWFSEQ--NVGNSIRVDSSPVMRN-QNWIGLACCF 56
MQ + +PLVP I +IPG EIP WF +Q +GN I + S M++ +NWIGLA
Sbjct: 991 MQIAHPDLLPLVPPISSIIPGSEIPSWFEKQHLGMGNVINIGRSHFMQHYKNWIGLALSV 1050
Query: 57 TFVTHKD----PTNLNDPIYSLFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRER 112
FV HK+ P ++ P L+T E DH+ L YFT +
Sbjct: 1051 IFVVHKERRIPPPDMEQP----------------------SILITDESDHLWLFYFTLDL 1088
Query: 113 LINSN--QL-VEFVSID-THPQELHVEVKKCGYKW 143
+ N +L V+ S D H Q+L VEVKK GY+W
Sbjct: 1089 FDDRNFDELEVKCRSRDLLHDQDLVVEVKKYGYRW 1123
>Glyma06g41380.1
Length = 1363
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 3 SSFSSWVPLVPIQIVIPGGEIPRWFSEQNVG--NSIRVDSSPVMRN-QNWIGLACCFTFV 59
S FS +IPG EIPRWF +++VG N I +D S ++ +N IG+A FV
Sbjct: 1188 SGFSGLFSFPLFSSIIPGSEIPRWFKKEHVGTGNVINIDRSHFTQHYKNRIGIALGVIFV 1247
Query: 60 THKD----PTNLNDP-IYSL-----------------FYWLKHERDSYEIPIHFRKDLVT 97
HK+ P ++ P I S+ + H R+ IP+ FR+DLVT
Sbjct: 1248 VHKERRMPPPDMEQPSILSITCGPSIPPQQREGVREDLHIPVHYREHLHIPVLFREDLVT 1307
Query: 98 VEFDHMVLLYFTRERLINSNQLVEFVSIDTHPQELHVEVKK 138
E DH+ L +F R VE D H ++L+VEVKK
Sbjct: 1308 EESDHVGLFFFKRPYF--DELKVESRFRDLHDEDLYVEVKK 1346
>Glyma12g16450.1
Length = 1133
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 2 QSSFSSWVPLVP------IQIVIPGGEIPRWFSEQNVG--NSIRVDSSPVMRNQNWIGLA 53
Q++F+ W +P I VIPG EI WF+ Q+V N I +D P+M++ IG+A
Sbjct: 964 QNNFAWWPIGMPGFSNPYICSVIPGSEIEGWFTTQHVSKDNLITIDPPPLMQHDKCIGVA 1023
Query: 54 CCFTFVTHKDPTNLNDPIYSLFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRERL 113
C F H + P Y + IP+ +D+VT + DH+ L Y
Sbjct: 1024 YCVVFAAHSTDLEMVPPETERGYPV---MGIVWIPVDVHEDVVTDKSDHLCLFYSPTYIG 1080
Query: 114 INSNQL-VEFVSIDTHPQELHVEVKKCGYKWVYEEDLD 150
I +L V+ + P VEVKK GY+ V+EEDLD
Sbjct: 1081 IGDWKLKVKIMDKKGFP----VEVKKYGYRRVHEEDLD 1114
>Glyma06g41240.1
Length = 1073
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 32/129 (24%)
Query: 31 NVGNSIRVDSSP---VMRNQNWIGLACCFTFVTHKDPTNLNDPIYSLFYWLKHERDSYEI 87
+GN I+++ + + + NWIG+AC FV HK+ T ++H
Sbjct: 942 GMGNVIKIEHASDHFMQHHNNWIGIACSVIFVPHKERT------------MRHP------ 983
Query: 88 PIHFRKDLVTVEFDHMVLLYFTRERLINSNQL-----VEFVSIDTHP-QELHVEVKKCGY 141
++LVT E DHM+L Y+TRE ++ V + P Q VEVKK GY
Sbjct: 984 -----ENLVTDESDHMLLFYYTRESFTFLTSFEHHDELKVVCASSDPDQYFDVEVKKYGY 1038
Query: 142 KWVYEEDLD 150
+ VY DL+
Sbjct: 1039 RRVYRHDLE 1047