Miyakogusa Predicted Gene
- Lj0g3v0304709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304709.1 tr|G7JF23|G7JF23_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_4g081270 PE=4 SV,39.07,6e-19,
,CUFF.20585.1
(192 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g43850.1 120 6e-28
Glyma06g42730.1 108 4e-24
Glyma12g15860.2 92 2e-19
Glyma12g15830.2 92 3e-19
Glyma06g40690.1 85 5e-17
Glyma06g40950.1 82 3e-16
Glyma06g40740.1 82 4e-16
Glyma06g40710.1 82 4e-16
Glyma06g39960.1 80 9e-16
Glyma06g40980.1 79 4e-15
Glyma06g41380.1 77 2e-14
Glyma12g15960.1 75 3e-14
Glyma06g40780.1 74 7e-14
Glyma06g41290.1 73 2e-13
Glyma12g16450.1 70 2e-12
Glyma06g41240.1 56 2e-08
>Glyma06g43850.1
Length = 1032
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Query: 22 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 81
I IV+PG +IP+WF+ Q+VG SI +D SP+M +WIG+ACC FV D T+L+ + S
Sbjct: 852 IDIVVPGNQIPKWFNNQSVGTSISLDPSPIMHGNHWIGIACCVVFVAFDDATDLHPNLRS 911
Query: 82 ---LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRERLINSNQL--------VEF 130
+ + + S +IPI KDLVTV H+ LLY +RE + ++ ++
Sbjct: 912 SIRIGFKTESYSSSLDIPILINKDLVTVGLHHLWLLYLSREEFFSYFKIEKMLDLHGIKM 971
Query: 131 VSIDTHPQELHVEVKKCGYKWVYEEDLDQLIHSMEHNG 168
S H Q L++EV CGY+WV++EDLD L ++ G
Sbjct: 972 QSTVWHSQGLNLEVHGCGYQWVFKEDLDTLNLTIMRRG 1009
>Glyma06g42730.1
Length = 774
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 25 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLND-----PI 79
VIPG +IPRWF +QNVG+SI +D S V+ + G+ACC FV H DP N D P
Sbjct: 610 VIPGTKIPRWFIKQNVGSSISMDLSRVIEDLYCRGVACCAIFVAHDDPNNNFDNWRGPPY 669
Query: 80 YSLFYWLKHERD----SYEIPIHFRKDLVTVEFDHMVLLYFTRERL-----INSNQL--V 128
+ + ++ + ++ +PI F++ LVTV FDH+++++F+RE L + SN L V
Sbjct: 670 DYIEFGFENLTNMCSLTFPVPILFKRALVTVGFDHLLIMFFSRELLTDLARVRSNGLDTV 729
Query: 129 EFVSIDTHP--QELHVEVKKCGYKWVYEEDLDQLIHSMEHNGNSS 171
+FV+ ++ P + L +EVK CGY ++E+ L + +M +GNSS
Sbjct: 730 KFVA-NSGPYYEGLRLEVKSCGYHLLFEDHLQRFKSNMMFSGNSS 773
>Glyma12g15860.2
Length = 608
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 73/138 (52%), Gaps = 29/138 (21%)
Query: 22 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 81
+ IVIPG EIPRWFS+QN G+SI +D SPVM N NWIG+ACC V DP+N+ +
Sbjct: 410 LNIVIPGTEIPRWFSKQNEGDSISMDPSPVMDNPNWIGVACCALLVALHDPSNIGN---- 465
Query: 82 LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRER--LINSNQLVEFVSIDT---- 135
W +P F E DH+++L+ +RE L S + +DT
Sbjct: 466 --RW-------RNLPFDFGS-----ELDHLLILFASREGFLLFPSEDETDMHGLDTRGFT 511
Query: 136 -----HPQELHVEVKKCG 148
HP+ L ++VK CG
Sbjct: 512 TSIYDHPKGLRMQVKSCG 529
>Glyma12g15830.2
Length = 841
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 29/137 (21%)
Query: 22 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 81
+ IVIPG EIPRWFS+QN G+SI +D SP+M + NWIG+ACC V H DP+N+ +
Sbjct: 641 LDIVIPGTEIPRWFSKQNEGDSISMDPSPLMEDPNWIGVACCALLVAHHDPSNIGNRSTH 700
Query: 82 LFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRER-LINSNQLVEFVSIDT----- 135
L D E DH+++L+ +RE L+ + +DT
Sbjct: 701 L-------------------DHYPSELDHLLILFASREEFLLFPRHETDMHGLDTRGFTT 741
Query: 136 ----HPQELHVEVKKCG 148
HP+ L ++VK CG
Sbjct: 742 WIRDHPKGLRLQVKSCG 758
>Glyma06g40690.1
Length = 1123
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 25 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDP--------TNLN 76
V PG EIPRWF+ ++ GN + +D+SPVM + NWIG+A C FV + T N
Sbjct: 932 VSPGSEIPRWFNNEHEGNCVNLDASPVMHDHNWIGVAFCAIFVVPHETLSAMSFSETEWN 991
Query: 77 DPIYSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLINS-------- 124
P++ +IP+ F +D LV + DHM L Y R I
Sbjct: 992 YPVFG------------DIPVDFYEDVDLELVLDKSDHMCLFYVDRHDFIADFHLDDKYL 1039
Query: 125 NQLVEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 159
+L+ +E + EVKK GY+WVY+ DL+Q
Sbjct: 1040 GRLLLKCDEGIGFKESYAEVKKYGYRWVYKGDLEQ 1074
>Glyma06g40950.1
Length = 1113
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 33/157 (21%)
Query: 23 QIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDP--------TN 74
++V PG EIPRWF+ ++ GN + +D+SPVM + NWIG+A C FV + T
Sbjct: 960 RVVSPGSEIPRWFNNEHEGNCVSLDASPVMHDHNWIGVAFCAIFVVPHETLSAMSFSETE 1019
Query: 75 LNDPIYSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLIN------- 123
N P Y+ +IP+ F +D LV + DHM L + R R I
Sbjct: 1020 GNYPDYN------------DIPVDFYEDVDLELVLDKSDHMWLFFVGRGRFIEYFHLKHK 1067
Query: 124 --SNQLVEFVSIDTHPQELHVEVKKCGYKWVYEEDLD 158
L++ + +E + EVKK GY+WVY+ D++
Sbjct: 1068 YLGRLLLKCDNEGIRFKESYAEVKKYGYRWVYKGDIE 1104
>Glyma06g40740.1
Length = 1202
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 26/152 (17%)
Query: 25 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVT-HKDPTNL----NDPI 79
V PG EIP+WF+ Q+ GN + +D+S VM + NWIG+A C FV H+ + + D
Sbjct: 1022 VSPGSEIPKWFNNQHEGNCVSLDASHVMHDDNWIGVAFCAIFVVPHETISAMAFSKTDGY 1081
Query: 80 YSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLI--------NSNQL 127
YS F +IP+ F +D LV + DHM L +F R+ I N +L
Sbjct: 1082 YSGF---------SDIPVDFYEDLDQELVLDKSDHMWLFFFDRKMFIFKFHLQPENLGRL 1132
Query: 128 VEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 159
+ +E + EVKK GY+WVY+ D +Q
Sbjct: 1133 LLKCDGRRKWKESYAEVKKYGYRWVYKGDNEQ 1164
>Glyma06g40710.1
Length = 1099
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 18/147 (12%)
Query: 25 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVT-HKDPTNLNDPIYSLF 83
V PG EIPRWF+ ++ GN + +D+SPVM ++NWIG+A C FV H+ + F
Sbjct: 948 VTPGSEIPRWFNNEHEGNCVSLDASPVMHDRNWIGVAFCAIFVVPHETLLAMG------F 1001
Query: 84 YWLKHERDSY-EIPIHFRKD----LVTVEFDHMVLLYFTRERLINS-----NQLVEFVS- 132
K R + +I + F D LV + DHM L + R +I L +VS
Sbjct: 1002 SNSKGPRHLFGDIRVDFYGDVDLELVLDKSDHMCLFFLKRHDIIADFHLKHRYLGRWVSR 1061
Query: 133 IDTHPQELHVEVKKCGYKWVYEEDLDQ 159
D +E + EVKK GY+WVY+ D++Q
Sbjct: 1062 YDGVLKESYAEVKKYGYRWVYKGDIEQ 1088
>Glyma06g39960.1
Length = 1155
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 27/156 (17%)
Query: 22 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDP------TNL 75
IQ V G EIPRWF+ Q+ GN + +D+SPVM + NWIG+A C FV + ++
Sbjct: 954 IQSVTTGSEIPRWFNNQHEGNCVSLDASPVMHDHNWIGVAFCLMFVVPHETLSAMGFSDS 1013
Query: 76 NDPIYSLFYWLKHERDSYEIPIHFRKD----LVTVEFDHMVLLYFTRE--------RLIN 123
+ P + F +IP+ F D LV + DHM L + +R +L
Sbjct: 1014 DCPPWHFF---------GDIPVDFYGDLDLELVLDKSDHMWLFFVSRTQFSRQFPLKLKY 1064
Query: 124 SNQLVEFVSIDTHPQELHVEVKKCGYKWVYEEDLDQ 159
+LV E + EVKK GY+WVY+ED ++
Sbjct: 1065 LGRLVLKCDKRMGWSESYAEVKKYGYRWVYKEDKEE 1100
>Glyma06g40980.1
Length = 1110
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 25 VIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYSLFY 84
V PG EIPRWF+ ++ GN + +D+ PVM + NWIG+A C FV + S
Sbjct: 946 VSPGSEIPRWFNNEHEGNCVSLDACPVMHDHNWIGVAFCAIFVVPHE-------TLSAMC 998
Query: 85 WLKHER---DSYEIPIHFRKD----LVTVEFDHMVLLYFTRERLINSNQLVE------FV 131
+ + ER D +I + F D LV + DHM L R I L +
Sbjct: 999 FSETERIYPDFGDILVDFYGDVDLELVLDKSDHMCLFLVKRMDFIYHFHLKHKYLGRLVL 1058
Query: 132 SIDTHPQELHVEVKKCGYKWVYEEDLD 158
D +E + EVKK GY+W+YEED++
Sbjct: 1059 ECDDEWKESYAEVKKYGYRWLYEEDIE 1085
>Glyma06g41380.1
Length = 1363
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 83/171 (48%), Gaps = 27/171 (15%)
Query: 1 MIQSAKLLMQSSFSSWVPLVPIQIVIPGGEIPRWFSEQNV--GNSIRVDSSPVMRN-QNW 57
MIQ + L S FS +IPG EIPRWF +++V GN I +D S ++ +N
Sbjct: 1178 MIQILQCLSLSGFSGLFSFPLFSSIIPGSEIPRWFKKEHVGTGNVINIDRSHFTQHYKNR 1237
Query: 58 IGLACCFTFVTHKD----PTNLNDP-IYSL-----------------FYWLKHERDSYEI 95
IG+A FV HK+ P ++ P I S+ + H R+ I
Sbjct: 1238 IGIALGVIFVVHKERRMPPPDMEQPSILSITCGPSIPPQQREGVREDLHIPVHYREHLHI 1297
Query: 96 PIHFRKDLVTVEFDHMVLLYFTRERLINSNQLVEFVSIDTHPQELHVEVKK 146
P+ FR+DLVT E DH+ L +F R VE D H ++L+VEVKK
Sbjct: 1298 PVLFREDLVTEESDHVGLFFFKRPYF--DELKVESRFRDLHDEDLYVEVKK 1346
>Glyma12g15960.1
Length = 791
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 19 LVPIQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDP 78
L + I+IPG +IP+WF++QN +SI +D PVM + N IG+ACC FVTH DP+NL D
Sbjct: 681 LGKMDIIIPGTQIPKWFNKQNSSSSISMDPFPVMDDPNLIGVACCVLFVTHDDPSNLGDR 740
Query: 79 IY-----SLFYWLKHERDSYEIPIHFRKDLVTVEFDHMV 112
+ S Y +++++ + +DL T+EF ++
Sbjct: 741 WHPCDCPSFGYGVRNKQLELSECSNEMQDLDTMEFAPLI 779
>Glyma06g40780.1
Length = 1065
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 22 IQIVIPGGEIPRWFSEQNVGNSIRVDSSPVMRNQNWIGLACCFTFVTHKDPTNLNDPIYS 81
I+ V PG EI RW + ++ GN + +D+SPVM + NWIG+A C FV + L+ +S
Sbjct: 909 IESVSPGSEIRRWLNNEHEGNCVSLDASPVMHDHNWIGVAFCAIFVVPHE--TLSAMSFS 966
Query: 82 LFYWLKHERDSYEIPIHFRKDLVTV--EFDHMVLLYFTRERLI-----NSNQLVEFVS-I 133
+ H + ++ DL V + DHM L + R +I L VS
Sbjct: 967 ETEYPFHLFGDIRVDLYGDLDLELVLDKSDHMWLFFVNRHDIIADFHLKDKYLGRLVSRY 1026
Query: 134 DTHPQELHVEVKKCGYKWVYEEDLDQLIH 162
D +E + EVKK GY+W+Y+ D++Q H
Sbjct: 1027 DGVLKESYAEVKKYGYRWLYKGDIEQRKH 1055
>Glyma06g41290.1
Length = 1141
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 34/156 (21%)
Query: 8 LMQSSFSSWVPLVP-IQIVIPGGEIPRWFSEQ--NVGNSIRVDSSPVMRN-QNWIGLACC 63
+MQ + +PLVP I +IPG EIP WF +Q +GN I + S M++ +NWIGLA
Sbjct: 990 MMQIAHPDLLPLVPPISSIIPGSEIPSWFEKQHLGMGNVINIGRSHFMQHYKNWIGLALS 1049
Query: 64 FTFVTHKD----PTNLNDPIYSLFYWLKHERDSYEIPIHFRKDLVTVEFDHMVLLYFTRE 119
FV HK+ P ++ P L+T E DH+ L YFT +
Sbjct: 1050 VIFVVHKERRIPPPDMEQP----------------------SILITDESDHLWLFYFTLD 1087
Query: 120 RLINSN--QL-VEFVSID-THPQELHVEVKKCGYKW 151
+ N +L V+ S D H Q+L VEVKK GY+W
Sbjct: 1088 LFDDRNFDELEVKCRSRDLLHDQDLVVEVKKYGYRW 1123
>Glyma12g16450.1
Length = 1133
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 1 MIQSAKLLMQSSFSSWVPLVP------IQIVIPGGEIPRWFSEQNVG--NSIRVDSSPVM 52
MIQ + Q++F+ W +P I VIPG EI WF+ Q+V N I +D P+M
Sbjct: 955 MIQIVQAHYQNNFAWWPIGMPGFSNPYICSVIPGSEIEGWFTTQHVSKDNLITIDPPPLM 1014
Query: 53 RNQNWIGLACCFTFVTHKDPTNLNDPIYSLFY------WLKHERDSYEIPIHFRKDLVTV 106
++ IG+A C F H + P Y W IP+ +D+VT
Sbjct: 1015 QHDKCIGVAYCVVFAAHSTDLEMVPPETERGYPVMGIVW---------IPVDVHEDVVTD 1065
Query: 107 EFDHMVLLYFTRERLINSNQL-VEFVSIDTHPQELHVEVKKCGYKWVYEEDLD 158
+ DH+ L Y I +L V+ + P VEVKK GY+ V+EEDLD
Sbjct: 1066 KSDHLCLFYSPTYIGIGDWKLKVKIMDKKGFP----VEVKKYGYRRVHEEDLD 1114
>Glyma06g41240.1
Length = 1073
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 32/129 (24%)
Query: 39 NVGNSIRVDSSP---VMRNQNWIGLACCFTFVTHKDPTNLNDPIYSLFYWLKHERDSYEI 95
+GN I+++ + + + NWIG+AC FV HK+ T ++H
Sbjct: 942 GMGNVIKIEHASDHFMQHHNNWIGIACSVIFVPHKERT------------MRHP------ 983
Query: 96 PIHFRKDLVTVEFDHMVLLYFTRERL-----INSNQLVEFVSIDTHP-QELHVEVKKCGY 149
++LVT E DHM+L Y+TRE + ++ V + P Q VEVKK GY
Sbjct: 984 -----ENLVTDESDHMLLFYYTRESFTFLTSFEHHDELKVVCASSDPDQYFDVEVKKYGY 1038
Query: 150 KWVYEEDLD 158
+ VY DL+
Sbjct: 1039 RRVYRHDLE 1047