Miyakogusa Predicted Gene

Lj0g3v0304469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304469.1 Non Chatacterized Hit- tr|K4BVT3|K4BVT3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.3,3e-18,DUF295,Protein of unknown function
DUF295,CUFF.20485.1
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02200.1                                                       164   2e-41
Glyma02g04930.1                                                        55   1e-08
Glyma10g11470.1                                                        52   1e-07
Glyma09g19520.1                                                        50   5e-07

>Glyma04g02200.1 
          Length = 372

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/138 (60%), Positives = 102/138 (73%), Gaps = 13/138 (9%)

Query: 1   MFSDNDLLVVTRALNKD----AGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFV 56
           +FS  D+L++ R L++D    AG E + V RTV FEVFKM+W    W ++ETLG++VLFV
Sbjct: 235 VFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFV 294

Query: 57  GGNNSHSFSASDFGGCFEADCIYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPLPCFPQ 116
           GGN+S SF ASDF GC  ADCIYFT  Y ESN DD+CGKHDLG+FRL+DKSIEPLPCF Q
Sbjct: 295 GGNSSLSFCASDFVGC-SADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQ 353

Query: 117 NS--------PIWITPNP 126
           NS        PIW++PNP
Sbjct: 354 NSCSRLRWPLPIWVSPNP 371


>Glyma02g04930.1 
          Length = 379

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 16/100 (16%)

Query: 18  AGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADC 77
            GG E++V   V F+V+K+D +  KW  ++ LGD+   +G + S S SA +  G ++ +C
Sbjct: 277 VGGREDRVAAVVCFKVYKLDEEWGKWVDVKNLGDRAFVLGNSCSFSVSAKELTG-YQENC 335

Query: 78  IYFTGHYPESNHDDSCGKHDLGIFRLKDKSIEPL---PCF 114
           IYFT  +            D+ ++ L D+SI  +   PC 
Sbjct: 336 IYFTDIF------------DVRVYNLDDRSIVSIDFDPCI 363


>Glyma10g11470.1 
          Length = 368

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 13/89 (14%)

Query: 27  RTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFSASDFGGCFEADCIYFTGHYPE 86
           RTV+F+VF++D +  KW ++  LG++VLF+G + + S SA D       +C+ F      
Sbjct: 269 RTVKFDVFRLDEEGKKWVELTDLGERVLFLGDDCAFSASAKDL-NLGRGNCVAF------ 321

Query: 87  SNHDDSCG----KHDLGIFRLKDKSIEPL 111
              DD  G     + +G+FRL D  I PL
Sbjct: 322 --RDDGLGFNRVLNGMGVFRLDDGKISPL 348


>Glyma09g19520.1 
          Length = 471

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 22/125 (17%)

Query: 6   DLLVVTRALNKDAGGEENQVCRTVRFEVFKMDWKESKWDKIETLGDKVLFVGGNNSHSFS 65
           +LL+V R  +     +++ V  T++FEV+ +D+ +  W K+E LGD+++F+G  +S SFS
Sbjct: 324 ELLLVCRYFST----KQDAVLETLKFEVYSLDFCQLSWKKVEDLGDQMIFLGKCSSTSFS 379

Query: 66  ASDFGGCFEADCIYFTGH--YPESNHDDS-----------CGKHDL---GIFRLKDKSIE 109
           A + G     + I+F      P  N  DS             + D+   GIFRL ++  E
Sbjct: 380 AMELGAGIR-NSIFFCNDPIVPWWNEWDSDHLKGILTRFGANRTDVSNWGIFRLGNEDGE 438

Query: 110 PLPCF 114
           P  CF
Sbjct: 439 PF-CF 442