Miyakogusa Predicted Gene

Lj0g3v0304429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304429.1 Non Chatacterized Hit- tr|I3SB43|I3SB43_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.77,0,coiled-coil,NULL; Snf7,Snf7; seg,NULL; CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING P,CUFF.20481.1
         (224 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g19000.1                                                       318   2e-87
Glyma09g07920.1                                                       318   2e-87
Glyma17g05880.1                                                       309   1e-84
Glyma13g16820.1                                                       164   8e-41
Glyma03g32180.1                                                       120   1e-27
Glyma15g22150.1                                                       117   1e-26
Glyma09g10020.1                                                       117   1e-26
Glyma19g34940.1                                                       116   2e-26
Glyma07g04120.1                                                       110   1e-24
Glyma05g10000.1                                                        71   1e-12
Glyma06g23570.2                                                        67   2e-11
Glyma06g23570.1                                                        67   2e-11
Glyma12g08510.1                                                        66   3e-11
Glyma04g21900.1                                                        66   3e-11
Glyma11g19930.1                                                        58   6e-09

>Glyma15g19000.1 
          Length = 223

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/224 (74%), Positives = 177/224 (79%), Gaps = 1/224 (0%)

Query: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60
           MSF+FG RKTPAELLRENKRMLDKSIREI+RERQGLQ QEKKLI EIKK+AKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           VMAKDL+RTRHQ+EKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNR++NLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELL 180
           SL KIMQEFERQNEKMEL SE+M                    VNQVLDEIGIDIN EL+
Sbjct: 121 SLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELV 180

Query: 181 HXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLRKM 224
           +                 Q E TGNDD GID DLQARLDNLRKM
Sbjct: 181 N-APSSAVAAPASKTKVPQVETTGNDDGGIDSDLQARLDNLRKM 223


>Glyma09g07920.1 
          Length = 223

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/224 (74%), Positives = 177/224 (79%), Gaps = 1/224 (0%)

Query: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60
           MSF+FG RKTPAELLRENKRMLDKSIREI+RERQGLQ QEKKLI EIKK+AKQGQMGAVR
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           VMAKDL+RTRHQ+EKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNR++NLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 121 SLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELL 180
           SL KIMQEFERQNEKMEL SE+M                    VNQVLDEIGIDIN EL+
Sbjct: 121 SLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELV 180

Query: 181 HXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLRKM 224
           +                 Q E TGNDD GID DLQARLDNLRKM
Sbjct: 181 N-APSSAVAAPAAKTKVPQVETTGNDDGGIDSDLQARLDNLRKM 223


>Glyma17g05880.1 
          Length = 223

 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 160/224 (71%), Positives = 175/224 (78%), Gaps = 1/224 (0%)

Query: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60
           MSF+FG RKTPAELLRENKRMLDKSIREI RERQGLQ+QEKKLI+EIKK+AKQGQMGAV+
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIDRERQGLQSQEKKLILEIKKSAKQGQMGAVK 60

Query: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           VMAKDL+RT+HQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMG MNR++NLP
Sbjct: 61  VMAKDLVRTKHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGHMNRQMNLP 120

Query: 121 SLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELL 180
           SL KI+QEFE QNE+MEL++EVM                    VNQVLDEIGIDIN ELL
Sbjct: 121 SLQKILQEFETQNERMELITEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINQELL 180

Query: 181 HXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQARLDNLRKM 224
                             Q E  GNDD+ ID +LQARLDNLRKM
Sbjct: 181 S-APSTAVAASAAKTKVPQVETVGNDDATIDSNLQARLDNLRKM 223


>Glyma13g16820.1 
          Length = 245

 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/249 (43%), Positives = 127/249 (51%), Gaps = 33/249 (13%)

Query: 1   MSFLFGSRKTPAE--------LLRENKRMLDK----SIREIKRERQ-----GLQNQEKKL 43
           MSF+FG RKTPA          + E     D     ++R   R R       +  +E   
Sbjct: 1   MSFIFGKRKTPAVCSSYSSILFMCEYNVFFDSMKSNTLRSCVRNRMRETRFAVTGEETDF 60

Query: 44  IVEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAM 103
             + K   +   MGAV+VMAKDL+RTRHQIEKFYKLKSQLQG      TLKSTQAMGEAM
Sbjct: 61  GDKEKCQTRPDGMGAVKVMAKDLVRTRHQIEKFYKLKSQLQG------TLKSTQAMGEAM 114

Query: 104 KGVTKAMGQMNRRLNLPSLPKIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXX 163
           KGVTKAMG MNR++NL SL KI+QEFE QNE+MEL++EV                     
Sbjct: 115 KGVTKAMGHMNRQMNLSSLQKILQEFETQNERMELITEVTRDAIDDALEGDEEEEETEDL 174

Query: 164 VNQVLDEIGIDINSEL--------LHXXXXXXXXXXXXXXXXXQAEPTGNDDSGIDDDLQ 215
           VNQ   E+ I I   L        L                  Q    G D + ID  LQ
Sbjct: 175 VNQ--QEVCILIPCSLHFFFQLKALLNAPSNAVAASATKTKVPQVGTVGKDAAAIDSYLQ 232

Query: 216 ARLDNLRKM 224
           ARL NLRKM
Sbjct: 233 ARLCNLRKM 241


>Glyma03g32180.1 
          Length = 212

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 103/176 (58%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + T  E LRE+KR +  + R I++E   LQ++EKKL+ EIK+ AK G   A +++A
Sbjct: 3   IFTKKPTAKEALRESKREMTNASRGIEKEIGALQSEEKKLVAEIKRTAKTGNEAATKILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + LIR R QI      ++Q++G++   Q + +  ++   +KG TKAM  MN+++      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMAAMNKKMEPAKQA 122

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSEL 179
           KI+Q+F++Q+ +M++ +E+M                     NQVLDEIG+D+ S+L
Sbjct: 123 KIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma15g22150.1 
          Length = 217

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 102/176 (57%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + +P E LR +KR +  + R I+RE   LQ +EKKL+ EIK+ AK G   A R++A
Sbjct: 3   IFKKKTSPKEALRTSKREMAVATRGIEREITSLQMEEKKLVAEIKREAKTGNEAATRILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+++      
Sbjct: 63  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQV 122

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSEL 179
           K+++EF++Q+ ++++  E+M                     NQVLDEIG+DI S+L
Sbjct: 123 KVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 178


>Glyma09g10020.1 
          Length = 219

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 102/176 (57%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + +P E LR +KR +  + R I+RE   LQ +EKKL+ EIK+ AK G   A R++A
Sbjct: 5   IFKKKTSPKEALRSSKREMAVATRGIEREIASLQMEEKKLVAEIKREAKTGNEAATRILA 64

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + L+R R QI      ++Q++GV+   Q L ++ ++   MKG TKAM  MN+++      
Sbjct: 65  RQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQV 124

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSEL 179
           K+++EF++Q+ ++++  E+M                     NQVLDEIG+DI S+L
Sbjct: 125 KVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQL 180


>Glyma19g34940.1 
          Length = 212

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 102/176 (57%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +F  + T  E LR++KR +  + R I++E   LQ +EKKL+ EIK+ AK G   A +++A
Sbjct: 3   IFTKKPTAKEALRDSKRQMTNATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILA 62

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLP 123
           + LIR R QI      ++Q++G++   Q + +  ++   +KG TKAM  MN+++      
Sbjct: 63  RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGLKGATKAMVAMNKQMEPAKQA 122

Query: 124 KIMQEFERQNEKMELVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSEL 179
           KI+Q+F++Q+ +M++ +E+M                     NQVLDEIG+D+ S+L
Sbjct: 123 KIIQDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQL 178


>Glyma07g04120.1 
          Length = 197

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 92/207 (44%), Gaps = 55/207 (26%)

Query: 62  MAKDLIRTRHQIEKF----------------------YK------------LKSQLQG-- 85
           MAKDLIRTRHQIEK                       YK            L SQ+    
Sbjct: 2   MAKDLIRTRHQIEKVCFKLGILFNTRLSMVDGKKALPYKHVIVAYGTAIVGLPSQIAYGR 61

Query: 86  --------VSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSLPKIMQEFERQNEKME 137
                   V  ++ TLKSTQAMGEA KG+TKAMGQMNR            EF    E   
Sbjct: 62  GVEKCHVIVFWQLATLKSTQAMGEATKGITKAMGQMNRW--------TADEFAFCTEDD- 112

Query: 138 LVSEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINSELLHXXXXXXXXXXXXXXXX 197
             + VM                    VNQ LDEIGIDINSEL++                
Sbjct: 113 --ARVMGDAIDDALEGGEEEEETEELVNQFLDEIGIDINSELVNAPATTSVSAPAAKNRV 170

Query: 198 XQAEPTGNDDSGIDDDLQARLDNLRKM 224
            QAE T N+DSGI DDLQARL+NLRKM
Sbjct: 171 AQAESTANEDSGIYDDLQARLNNLRKM 197


>Glyma05g10000.1 
          Length = 132

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 12/61 (19%)

Query: 2  SFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRV 61
           F+FG RKTPAELLRENKRMLDKS            +QEKKLI+EIKK+AKQGQM +  +
Sbjct: 3  CFIFGKRKTPAELLRENKRMLDKS------------SQEKKLILEIKKSAKQGQMLSCSL 50

Query: 62 M 62
          +
Sbjct: 51 L 51


>Glyma06g23570.2 
          Length = 227

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +   +  P +LLR+ +R L +  R I+R+ + +Q +EK +   I++ AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSL 122
           K+L+R+R  + + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  KELVRSRQTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 PKIMQEFERQNEKMELVSEVM 143
              MQEF ++  K  ++ E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma06g23570.1 
          Length = 227

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +   +  P +LLR+ +R L +  R I+R+ + +Q +EK +   I++ AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSL 122
           K+L+R+R  + + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  KELVRSRQTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 PKIMQEFERQNEKMELVSEVM 143
              MQEF ++  K  ++ E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma12g08510.1 
          Length = 228

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +   +  P +LLR+ +R L +  R I+R+ + +Q +EK +   I++ AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSL 122
           K+L+R+R  + + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  KELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLIKAPEM 125

Query: 123 PKIMQEFERQNEKMELVSEVM 143
              MQEF ++  K  ++ E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma04g21900.1 
          Length = 227

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 81/141 (57%), Gaps = 2/141 (1%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMA 63
           +   +  P +LLR+ +R L +  R I+R+ + +Q +EK +   I++ AK+  MG+ + +A
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALA 66

Query: 64  KDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLPSL 122
           K+L+R+R  + + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N  +  P +
Sbjct: 67  KELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPEM 125

Query: 123 PKIMQEFERQNEKMELVSEVM 143
              MQEF ++  K  ++ E++
Sbjct: 126 AVTMQEFSKEMTKAGVIEEIV 146


>Glyma11g19930.1 
          Length = 229

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 4   LFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVE--IKKNAKQGQMGAVRV 61
           +   +  P +LLR+ +R L +  R I+R+ + L  +EKK  V+  I++ AK+  MG+ + 
Sbjct: 7   ILKPKPNPQQLLRDWQRRLRQQCRNIERQIRVLIYREKKKNVQKAIREAAKRNDMGSAKA 66

Query: 62  MAKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRRLNLP 120
           + K+L+R+R  + + Y+ K+Q+  +S+ + +++   + +G   K   + M  +N     P
Sbjct: 67  LTKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLTKAP 125

Query: 121 SLPKIMQEFERQNEKMELVSEVM 143
            +   MQEF ++  K  ++ E++
Sbjct: 126 EMAVAMQEFSKEMTKAGVIEEIV 148