Miyakogusa Predicted Gene

Lj0g3v0304169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304169.1 tr|A8IMC1|A8IMC1_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14484,55.68,1e-18,Abi,CAAX amino terminal protease;
YHET-RELATED,NULL; ABHYDROLASE DOMAIN-CONTAINING
PROTEIN,NULL,CUFF.20460.1
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g41230.2                                                       170   3e-43
Glyma18g15030.1                                                       170   3e-43
Glyma08g41230.1                                                       170   3e-43
Glyma06g44790.1                                                        77   4e-15
Glyma08g02270.1                                                        74   3e-14
Glyma05g37280.1                                                        72   1e-13
Glyma10g37350.1                                                        67   4e-12
Glyma20g30380.2                                                        64   3e-11
Glyma20g30380.1                                                        64   3e-11
Glyma12g12560.1                                                        51   3e-07

>Glyma08g41230.2 
          Length = 337

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 104/129 (80%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN    ET  R+TD LVRLLP +GSS + TAC++  TG+LAPLLEETVFRGF M SL
Sbjct: 199 VSFFN---GETPQRETDALVRLLPLIGSSNLSTACLVGITGVLAPLLEETVFRGFFMTSL 255

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTPVAV+ISAAVF+L H TPG FP LFVLGT LG SYAQT NLLTPITIH+FWN G
Sbjct: 256 TKWVPTPVAVVISAAVFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHSFWNSG 315

Query: 120 -LLVLTLLQ 127
            +L LT LQ
Sbjct: 316 VILFLTFLQ 324


>Glyma18g15030.1 
          Length = 350

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 105/129 (81%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN    ET  R+ D LVRLLP +GSS +RTAC++  TG+LAPLLEETVFRGF M SL
Sbjct: 212 VSFFN---GETPQREADALVRLLPLIGSSNLRTACLVGITGVLAPLLEETVFRGFFMTSL 268

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTPVAV+ISAA+F+L H TPG FP LFVLGT LG SYAQT NLLTPITIH+FWN G
Sbjct: 269 TKWVPTPVAVVISAALFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHSFWNSG 328

Query: 120 -LLVLTLLQ 127
            +L+LT LQ
Sbjct: 329 VILLLTFLQ 337


>Glyma08g41230.1 
          Length = 350

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 104/129 (80%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +SFFN    ET  R+TD LVRLLP +GSS + TAC++  TG+LAPLLEETVFRGF M SL
Sbjct: 212 VSFFN---GETPQRETDALVRLLPLIGSSNLSTACLVGITGVLAPLLEETVFRGFFMTSL 268

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTPVAV+ISAAVF+L H TPG FP LFVLGT LG SYAQT NLLTPITIH+FWN G
Sbjct: 269 TKWVPTPVAVVISAAVFALAHLTPGEFPQLFVLGTALGFSYAQTHNLLTPITIHSFWNSG 328

Query: 120 -LLVLTLLQ 127
            +L LT LQ
Sbjct: 329 VILFLTFLQ 337


>Glyma06g44790.1 
          Length = 301

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 1/109 (0%)

Query: 16  TDPLVRLLPVGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTPVAVLISAAV 75
            +P+++ + + S   R +CVLA   ++ PLLEE V+RGF++ SL+  +    AV IS+ V
Sbjct: 191 NNPILKDMLLNSDISRLSCVLAYC-IVTPLLEEVVYRGFLLTSLSSTLEWQQAVAISSVV 249

Query: 76  FSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLVLT 124
           FS  HF+   F  LF++G  LG SY  + NL + I IH+ +N   LV+T
Sbjct: 250 FSAIHFSGENFLQLFIIGCVLGCSYCWSGNLSSSIAIHSLYNALTLVIT 298


>Glyma08g02270.1 
          Length = 341

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 12/120 (10%)

Query: 8   SQETSTRKTDPLVRLLPVGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTPV 67
           S E S R  DP+  LL    + V + C        AP+ EE VFRGF++ SLTK++P   
Sbjct: 234 SVEQSIRARDPVAMLL---YATVVSVC--------APVWEEIVFRGFLLPSLTKYMPVWC 282

Query: 68  AVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLVLTLLQ 127
           A+L+S+  F+L HF       L  LG  +G+ Y ++RNLL  + +H+ WN G + L L++
Sbjct: 283 AILVSSIAFALAHFNIQRMLPLIFLGMVMGVIYTRSRNLLPSMLLHSLWN-GFVFLDLMK 341


>Glyma05g37280.1 
          Length = 276

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 12/121 (9%)

Query: 7   ESQETSTRKTDPLVRLLPVGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTP 66
            S E S    DP+  LL    + V + C        AP+ EE VFRGF++ SLTK++P  
Sbjct: 168 SSVEQSIMARDPVAMLL---YATVVSVC--------APVWEEIVFRGFLLPSLTKYMPVW 216

Query: 67  VAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLVLTLL 126
            A+L+S+  F+L HF       L  LG  +G+ Y ++RNLL  + +H+ WN G + L L+
Sbjct: 217 CAILVSSIAFALAHFNIQSMLPLIFLGMVMGVIYTRSRNLLPSMLLHSLWN-GFVFLDLM 275

Query: 127 Q 127
           +
Sbjct: 276 K 276


>Glyma10g37350.1 
          Length = 336

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 12/111 (10%)

Query: 18  PLVRLLPVGSSYVRTACVLAS----------TGLLAPLLEETVFRGFVMASLTKWVPTPV 67
           P+++  PV  S V  + V               + AP+ EE VFRGF++ SLTK++P   
Sbjct: 218 PVLQYTPVAISSVEQSIVARDLVAMALYAVIVSVCAPIWEEIVFRGFLLPSLTKYMPVWS 277

Query: 68  AVLISAAVFSLCHFT-PGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWN 117
           A+L+S+  F+L HF    V P +F LG  +G  + ++RNLL  + +H+ WN
Sbjct: 278 AILVSSIAFALAHFNIQRVLPLVF-LGMVMGTVFVRSRNLLPSMLLHSLWN 327


>Glyma20g30380.2 
          Length = 336

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 47/75 (62%)

Query: 43  APLLEETVFRGFVMASLTKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQ 102
           AP+ EE VFRGF++ SLTK++P   A+L+S+  F+L HF       L  LG  +G  + +
Sbjct: 253 APIWEEIVFRGFLLPSLTKYMPVWSAILVSSIAFALAHFNIQRMLPLVFLGMVMGTVFVR 312

Query: 103 TRNLLTPITIHAFWN 117
           +RNL   + +H+ WN
Sbjct: 313 SRNLFPSMLLHSLWN 327


>Glyma20g30380.1 
          Length = 360

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 47/75 (62%)

Query: 43  APLLEETVFRGFVMASLTKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQ 102
           AP+ EE VFRGF++ SLTK++P   A+L+S+  F+L HF       L  LG  +G  + +
Sbjct: 277 APIWEEIVFRGFLLPSLTKYMPVWSAILVSSIAFALAHFNIQRMLPLVFLGMVMGTVFVR 336

Query: 103 TRNLLTPITIHAFWN 117
           +RNL   + +H+ WN
Sbjct: 337 SRNLFPSMLLHSLWN 351


>Glyma12g12560.1 
          Length = 96

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 44  PLLEETVFR------GFVMASLTKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLG 97
           P+L+E +        GF++ SL+  +    AV IS+ +FSL HF+   F  LF++G  LG
Sbjct: 7   PILKEMLLNSDISRVGFLLTSLSSAMEWQQAVPISSVLFSLIHFSGENFLQLFIIGCVLG 66

Query: 98  ISYAQTRNLLTPITIHAFWNIGLLVLT 124
            S   T NL + I IH+ +N   LV+T
Sbjct: 67  YSNCWTGNLSSSIVIHSLYNALTLVIT 93