Miyakogusa Predicted Gene

Lj0g3v0303829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303829.1 Non Chatacterized Hit- tr|I3S103|I3S103_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.13,0,Ribosomal_L10,Ribosomal protein L10/acidic P0; MRNA
TURNOVER PROTEIN 4 MRT4,NULL; 60S ACIDIC RIBOSOM,CUFF.20434.1
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g19660.1                                                       420   e-118
Glyma15g05360.1                                                       418   e-117
Glyma15g05360.2                                                       236   2e-62
Glyma11g35060.1                                                        59   5e-09
Glyma18g03300.1                                                        59   6e-09
Glyma14g06630.1                                                        54   1e-07
Glyma02g42260.1                                                        54   1e-07
Glyma02g42260.2                                                        54   2e-07

>Glyma08g19660.1 
          Length = 229

 Score =  420 bits (1080), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/229 (88%), Positives = 216/229 (94%)

Query: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60
           MPKSKRN+QVTLSKTKKKGR+HKE IVN I+DAAEKY  +YVFSFENMRN KFKEFRDQL
Sbjct: 1   MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGHVYVFSFENMRNQKFKEFRDQL 60

Query: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
           KSSSRFFLGSNKVMQVALGRSASDEI+P L+KVSKLLRGDSGM FTNLSKEEVERLF  +
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMVFTNLSKEEVERLFKEF 120

Query: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
           EEYDFARTG  ATEKVDL+EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229
           KPLSPEASRILRL+GIKMATFRL L+CRW+PD+FELYIDGP +SD+ECS
Sbjct: 181 KPLSPEASRILRLMGIKMATFRLSLICRWSPDEFELYIDGPDESDIECS 229


>Glyma15g05360.1 
          Length = 229

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/229 (86%), Positives = 218/229 (95%)

Query: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60
           MPKSKRN+QVTLSKTKKKGR+HKE IVN I+DAAEKY  +YVFSFENMRN K KEFR+QL
Sbjct: 1   MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGCVYVFSFENMRNQKLKEFREQL 60

Query: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
           KS+SRFFLGSNKVMQVALGRSASDEI+P L+KVSKLLRGDSGMFFTNLSKEEVERLF  +
Sbjct: 61  KSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMFFTNLSKEEVERLFKEF 120

Query: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
           EEYDFARTG IATEKVDL+EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVC+EG
Sbjct: 121 EEYDFARTGSIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCDEG 180

Query: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229
           KPLSPEA+RILRL+GIKMATFRL+L+CRW+PD+FELYIDGP +SD+ECS
Sbjct: 181 KPLSPEAARILRLMGIKMATFRLNLICRWSPDEFELYIDGPDESDIECS 229


>Glyma15g05360.2 
          Length = 167

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/136 (86%), Positives = 126/136 (92%)

Query: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60
           MPKSKRN+QVTLSKTKKKGR+HKE IVN I+DAAEKY  +YVFSFENMRN K KEFR+QL
Sbjct: 1   MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGCVYVFSFENMRNQKLKEFREQL 60

Query: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
           KS+SRFFLGSNKVMQVALGRSASDEI+P L+KVSKLLRGDSGMFFTNLSKEEVERLF  +
Sbjct: 61  KSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMFFTNLSKEEVERLFKEF 120

Query: 121 EEYDFARTGGIATEKV 136
           EEYDFARTG IATEKV
Sbjct: 121 EEYDFARTGSIATEKV 136


>Glyma11g35060.1 
          Length = 320

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 35  EKYSSLYVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVS 94
           + Y+ + V + +N+ + + +  R  L+  S   +G N +M+ ++   A +     +  + 
Sbjct: 23  DNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNTMMKRSIKIHAQNTGDTTILNLI 82

Query: 95  KLLRGDSGMFFTNLSKEEVERLFNGYEEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFL 154
            LL G+ G+ FT    +EV+ + + Y+    AR G +A   V +  G           F 
Sbjct: 83  PLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVAPIDVIVPPGN-TGLDPSQTSFF 141

Query: 155 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLGIKMATFRLHLVCRW 209
           +   +P ++NKG VE+V+   +  +G  +    + +L  L I+  ++ L +V  +
Sbjct: 142 QVLNIPTKINKGTVEIVTPVELIMKGDKVGSSEAVLLSKLAIRPFSYGLAVVSVY 196


>Glyma18g03300.1 
          Length = 317

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 35  EKYSSLYVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVS 94
           + Y+ + V + +N+ + + +  R  L+  S   +G N +M+  +   A +     +  + 
Sbjct: 23  DNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNTMMKRTIKIHAQNTGNTTILNLI 82

Query: 95  KLLRGDSGMFFTNLSKEEVERLFNGYEEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFL 154
            LL G+ G+ FT    +EV+ + + Y+    AR G +A   V +  G           F 
Sbjct: 83  PLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVAPIDVVVPPGN-TGLDPSQTSFF 141

Query: 155 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLGIKMATFRLHLVCRW 209
           +   +P ++NKG VE+++   +  +G  +    + +L  L I+  ++ L +V  +
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIMKGDKVGSSEAALLSKLAIRPFSYGLAVVSVY 196


>Glyma14g06630.1 
          Length = 319

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 2/194 (1%)

Query: 17  KKGREHKEVIVNA-IRDAAEKYSSLYVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQ 75
           K+ +  K++  +A + D  E+Y  + V + +N+ + + +  R  L+  S   +G N +M+
Sbjct: 4   KQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 63

Query: 76  VALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGYEEYDFARTGGIATEK 135
            ++   A          +  LL G+ G+ FT    +EV      Y+    AR G +A   
Sbjct: 64  RSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123

Query: 136 VDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLG 195
           V +  G           F +   +P ++NKG VE+++   + ++G  +    + +L  LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182

Query: 196 IKMATFRLHLVCRW 209
           I+  ++ L ++  +
Sbjct: 183 IRPFSYGLVVLSVY 196


>Glyma02g42260.1 
          Length = 320

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)

Query: 17  KKGREHKEVIVNA-IRDAAEKYSSLYVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQ 75
           K+ +  K++  +A + D  E+Y  + V + +N+ + + +  R  L+  S   +G N +M+
Sbjct: 4   KQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 63

Query: 76  VALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGYEEYDFARTGGIATEK 135
            ++   A          +  LL G+ G+ FT    +EV      Y+    AR G +A   
Sbjct: 64  RSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123

Query: 136 VDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLG 195
           V +  G           F +   +P ++NKG VE+++   +  +G  +    + +L  LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182

Query: 196 IKMATFRLHLVCRW 209
           I+  ++ L ++  +
Sbjct: 183 IRPFSYGLVVLSVY 196


>Glyma02g42260.2 
          Length = 273

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)

Query: 17  KKGREHKEVIVNA-IRDAAEKYSSLYVFSFENMRNLKFKEFRDQLKSSSRFFLGSNKVMQ 75
           K+ +  K++  +A + D  E+Y  + V + +N+ + + +  R  L+  S   +G N +M+
Sbjct: 4   KQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 63

Query: 76  VALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGYEEYDFARTGGIATEK 135
            ++   A          +  LL G+ G+ FT    +EV      Y+    AR G +A   
Sbjct: 64  RSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123

Query: 136 VDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLG 195
           V +  G           F +   +P ++NKG VE+++   +  +G  +    + +L  LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182

Query: 196 IKMATFRLHLVCRW 209
           I+  ++ L ++  +
Sbjct: 183 IRPFSYGLVVLSVY 196