Miyakogusa Predicted Gene
- Lj0g3v0303389.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0303389.2 Non Chatacterized Hit- tr|C5YBT5|C5YBT5_SORBI
Putative uncharacterized protein Sb06g001200
OS=Sorghu,27.93,4e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
coiled-coil,NULL; seg,NULL,CUFF.20402.2
(734 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g30640.1 325 1e-88
Glyma04g30640.2 128 2e-29
Glyma15g35310.1 117 4e-26
Glyma11g03020.1 62 2e-09
Glyma15g21480.1 57 5e-08
Glyma05g23600.1 57 8e-08
Glyma12g25030.1 54 6e-07
>Glyma04g30640.1
Length = 2354
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/228 (67%), Positives = 171/228 (75%), Gaps = 1/228 (0%)
Query: 420 REC-ARAWTVQAIDEQGNEMKIQVTNPGVFDMPQGQRIVVPFDRQMRACGEAAALLSGAC 478
R C R W VQAID+ GN +IQVT VF MP GQ IVVPFD Q+RA G+AA LLSGAC
Sbjct: 2124 RHCRGREWAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVVPFDGQLRAYGDAATLLSGAC 2183
Query: 479 GRISTKPDNIPIYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNH 538
GRI T N+PI FESW KVP SYK CFN LK LFHFQASE A+RYC LTM RKYRN
Sbjct: 2184 GRIVTDSKNVPINFESWTKVPKSYKDNCFNILKTLFHFQASESTARRYCLLTMSRKYRNG 2243
Query: 539 KLNLWKLNFNPSYSREQLIEKVPNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIP 598
K LW F+PS SREQLI KVP GIPEDQW F+D HLKPEY E+C+KN R+KQT+P
Sbjct: 2244 KHKLWTSAFDPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAVVRQKQTVP 2303
Query: 599 HTGGSKLLSRRQQEMEEEAGHAVGRGELYIATHKKKDGSYVNAEARSI 646
HTGG+KLLSR+Q EME E G + R ELYIAT KKKDGS+VN EARSI
Sbjct: 2304 HTGGAKLLSRKQHEMEVELGRPISRVELYIATRKKKDGSFVNEEARSI 2351
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 163/401 (40%), Gaps = 89/401 (22%)
Query: 1 MPRKAKRSKKGVAAKGRTRASNGTSNLMPQSSSQGHSVHLEPQPHLLEPTPPQAP----V 56
MPRKAK SKK R S G SNL+P +SSQGHS +EP P AP +
Sbjct: 1557 MPRKAKCSKK--------RPSRGISNLVPLASSQGHSAPVEPSLQPSTTAQPCAPMITII 1608
Query: 57 PPLGSTPHSLAHPSA--STRQPHATKLNGCLVVAEARTRASHGASNLMAQASSQGHSVPL 114
PP T ++ S S PH K + R G SNL+ ASSQGHS P+
Sbjct: 1609 PPSVPTAQNMVSTSDPPSHTIPHKAK--------RSNKRVCRGISNLVPHASSQGHSAPV 1660
Query: 115 EPQSHLLEPTPAQALVPPLGSTPHSLAPPSAPLGSVPHALAPPSAPTRQPHATKSLSSST 174
E PPL P +A P P+ + PPS PT Q + S
Sbjct: 1661 E---------------PPL--KPSKVARPRVPIIT----FIPPSIPTAQNLVSASDPPLQ 1699
Query: 175 RRMPIKEKHSKTGVATKAPPSVSHGTSNVMPQTSSQGYSISEDPQP---DLLESTLGPLL 231
R P K K S+ S SN+MP TSS G+S +P P + + P
Sbjct: 1700 R--PRKAKLSQG--------RASLSISNLMPYTSSHGHSTHVEPPPLRSSQVAHSCAPT- 1748
Query: 232 YDLTPPWASTRAAKRRGFSGVLDLQAKGMPHEAERSKNGIATRAPSRISHGTSNMLSQAS 291
+ PP S + S + + E R A + R S G SN++ S
Sbjct: 1749 -TVVPP--SIATTQNMVSSSDPPFHSTSLTFEMSRK----AKFSRERASLGISNLMPFTS 1801
Query: 292 SHRHSVPVEP------QEDLLEPTLPQPVVPPLGSTPQGLTPPSAPTRRTRATKRHSSQA 345
SH HS VEP PT+ +VPP +T Q + PS P
Sbjct: 1802 SHGHSTHVEPPLQPSQVAQSCAPTI--TLVPPSIATTQNMVSPSDPL------------L 1847
Query: 346 KDILRKAKRLKNGVATRAPSHGTSNLMSQASSQVHSDHVEP 386
+ KAK K + SH SNLM ASSQ HS +VEP
Sbjct: 1848 HKVPHKAKHSK-----KRGSHDISNLMPHASSQGHSRYVEP 1883
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 165/374 (44%), Gaps = 87/374 (23%)
Query: 2 PRKAKRSKKGVAAKGRTRASNGTSNLMPQSSSQGHSVHLEPQP----HLLEPTPPQAPVP 57
PRKAK S+ RAS SNLMP +SS GHS H+EP P + P VP
Sbjct: 1701 PRKAKLSQ--------GRASLSISNLMPYTSSHGHSTHVEPPPLRSSQVAHSCAPTTVVP 1752
Query: 58 PLGSTPHSLAHPSASTRQPHATKLNGCLV--VAEARTRASHGASNLMAQASSQGHSV--- 112
P +T ++ S+S H+T L + +R RAS G SNLM SS GHS
Sbjct: 1753 PSIATTQNMV--SSSDPPFHSTSLTFEMSRKAKFSRERASLGISNLMPFTSSHGHSTHVE 1810
Query: 113 -PLEPQSHLLEPTPAQALVPPLGSTPHSLAPPSAPL--------------GS------VP 151
PL+P P LVPP +T ++ PS PL GS +P
Sbjct: 1811 PPLQPSQVAQSCAPTITLVPPSIATTQNMVSPSDPLLHKVPHKAKHSKKRGSHDISNLMP 1870
Query: 152 HA--------LAPPSAPTR--QPHATKSLSSSTRRMPIKEKHSKTGVATKAPP-SVSHGT 200
HA + PP P+ Q HA +LS +PI + ++ PP +V G
Sbjct: 1871 HASSQGHSRYVEPPLQPSELAQFHAP-TLSHIPSSIPI----ALDPLSRSVPPQNVFSGI 1925
Query: 201 SNVMPQTSSQGYSISED-PQ-PDLLESTLGPLLYDLTPPWASTRAAKRRGFSGVLDLQA- 257
N++ Q + QGYS+ E+ PQ P L P + D+ P V DL +
Sbjct: 1926 LNLIHQAAYQGYSLLEELPQPPSNLAQPCAPTITDIPP-----------SIPTVQDLVSP 1974
Query: 258 ----KG-MPHEAERSKNGIATRAPSRISHGTSNMLSQASSHRHSVPVEPQEDLLEPT-LP 311
KG MP +A+ SK R+S SN++ +ASS H +P+E L+P+ L
Sbjct: 1975 SNLPKGLMPRKAKHSKK--------RVSRSLSNLMPRASSQGHCIPMELP---LQPSELA 2023
Query: 312 QPVVPPLGSTPQGL 325
QP PP+ P +
Sbjct: 2024 QPCAPPVVLDPSSI 2037
>Glyma04g30640.2
Length = 164
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 420 REC-ARAWTVQAIDEQGNEMKIQVTNPGVFDMPQGQRIVVPFDRQMRACGEAAALLSGAC 478
R C R W VQAID+ GN +IQVT VF MP GQ IVVPFD Q+RA G+AA LLSGAC
Sbjct: 72 RHCRGREWAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVVPFDGQLRAYGDAATLLSGAC 131
Query: 479 GRISTKPDNIPIYFESWPKVPDSYKKECFNALK 511
GRI T N+PI FESW KVP SYK CFN LK
Sbjct: 132 GRIVTDSKNVPINFESWTKVPKSYKDNCFNILK 164
>Glyma15g35310.1
Length = 1053
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 561 PNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIPHTGGSKLLSRRQQEMEEEAGHA 620
P+G+P+ + D + E+C +N E R KQ IPHTGGSK RR+ E+ E G
Sbjct: 839 PSGVPK----AYFDNCFETILKELCWRNKEIRSKQVIPHTGGSKANPRRRNELLLETGKL 894
Query: 621 VGRGELYIATHKKKDGSYVNAEARSIVEKLEEQLGQ-LVNTSEIASNDALAKVLGPDHAG 679
G+LYI THK+KDGS+VN A++I E++E L Q +V+ SE++ D + +VLG +H+G
Sbjct: 895 PSHGQLYIETHKRKDGSFVNEAAKTIAEQIEVGLTQSIVDESEVSPLDVVGRVLGLEHSG 954
Query: 680 RVRSLGLGGLHSVAFASTTTR 700
RVR +GLG + S F +T R
Sbjct: 955 RVRCMGLGVVPSNTFRNTRFR 975
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 419 GRECARAWTVQAIDEQGNEMKIQVTNPGVFDMPQGQRIVVPFDRQMRACGEAAALLSGAC 478
GRE WTV+AID + KI+V GV +P+ RI+V FD Q +A GEA ALL+G
Sbjct: 760 GRESTHCWTVEAIDSEETIKKIKVKVRGVNSLPRELRIIVNFDDQGQAIGEAQALLAGFL 819
Query: 479 GRISTKPDNIPIYFESW---PKVPDSYKKECFNALKNLFHFQASEVIAKR 525
G ++ P+ ++ W VP +Y CF + ++ E+ +K+
Sbjct: 820 GTLAADCKLFPMDYDRWSGPSGVPKAYFDNCFETILKELCWRNKEIRSKQ 869
>Glyma11g03020.1
Length = 736
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 488 IPIYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNLWKLNF 547
+ I E W V +S K + + + + S+ + K+ G+++R K L
Sbjct: 73 VSILHEDWDHVEESEKNMIWQTIMHNYDVPNSKFLKKKLISYA-GQRWRGFKTQLSSFYI 131
Query: 548 NPSYSREQLIEKVPNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIPHT----GGS 603
Y + +K + +D W FV+ L P + E +K E + PHT G
Sbjct: 132 YGKYKDKSPCDKY-TFLKKDTWQRFVESRLDPAFQEKRKKAQEVQANNLYPHTLSCGGYQ 190
Query: 604 KLLSRRQQEMEEEAGHA---------------VGRGELYIATHKKKDGSYVNAEARSIVE 648
KL QE ++ A + R E + +KK G Y+N E+R I E
Sbjct: 191 KLEENMMQEKAKKVQEASQLDHSLVIVEPPSPLKRHEKWKRARQKKSGDYINEESRIIAE 250
Query: 649 KLEEQLGQLVNTSE--IASNDALAKVLG-PDHAGRVRSLGLG 687
K++ + Q S + D L +G P+H GRVR G G
Sbjct: 251 KIDSLVEQSTQGSFLPLGREDILTVAIGQPEHPGRVRGAGRG 292
>Glyma15g21480.1
Length = 1869
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 486 DNIPIYFESWPKVPDSYKKECFNALKNLFHF-QASEVIAKRYCYLTMGRKYRNHKLNL-- 542
D + + +E+W VP + K + ++ F +AS++ K+ T+G ++R K +L
Sbjct: 1078 DKVDVTYENWKHVPITQKDLIWEDIQAEFDIPEASDLRTKKKILQTVGERWRQFKSDLTS 1137
Query: 543 -WKLNFNPSYSREQLIEKVPNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIPHT- 600
W L + S + + K+ GI +++W F P + + +K +K+ T PH
Sbjct: 1138 KWALAADKD-SVDDTVCKM-YGISKEKWTQFCQSRRDPSWENVRKKAQAVQKQNTAPHVM 1195
Query: 601 --GG-----SKLLSRRQQEMEEEAGHA------------VGRGELYIATHKKKDGSYVNA 641
GG KL+ ++++ EEA + + R + KK G +
Sbjct: 1196 SRGGYEYLEKKLMDEKRKKKLEEATQSGSTDTVIDPPSPIKRHVKWKLARTKKTGDMTSE 1255
Query: 642 EARSIVEK---LEEQLGQLVNTSEIASNDALAKVLG-PDHAGRVRSLGLGGLHSVAFAST 697
A+ I +K LEEQ Q + +D L +G P+H GRVR++G G F S+
Sbjct: 1256 AAKEIADKIDALEEQASQGSFVTH-GRHDILTAAIGRPEHPGRVRAVGAGITIKQYFGSS 1314
Query: 698 TTRFSV 703
+ S+
Sbjct: 1315 SRTSSI 1320
>Glyma05g23600.1
Length = 1707
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 41/272 (15%)
Query: 486 DNIPIYFESWPKVPDSYKKECFNALKNLFHF-QASEVIAKRYCYLTMGRKYRNHKLNL-- 542
D + + +E+W VP + K + ++ F +AS++ K+ T+G ++R K +L
Sbjct: 1078 DKVDVTYENWKHVPITQKDLIWEDIQAEFDIPEASDLRTKKKILQTVGERWRQFKSDLTS 1137
Query: 543 -WKLNFNPSYSREQLIEKVPNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIPHT- 600
W L + S + + K+ GI +++W F P + + +K +K+ T PH
Sbjct: 1138 KWALAADKD-SVDDTVCKM-YGISKEKWTQFCQSRRDPSWENVRKKAQAVQKQNTAPHVM 1195
Query: 601 --GG-----SKLLSRRQQEMEEEAGHA------------VGRGELYIATHKKKDGSYVNA 641
GG KL+ ++++ EEA + + R + KK G +
Sbjct: 1196 SRGGYEYLEKKLMDEKRKKKLEEATQSGSTDTVIDPPSPIIRHVKWKLARTKKTGDMTSE 1255
Query: 642 EARSIVEK---LEEQLGQLVNTSEIASNDALAKVLG-PDHAGRVRSLGLGGLHSVAFAST 697
A+ I +K LEEQ Q + +D L +G P+H GRVR++G G
Sbjct: 1256 AAKEIADKIDALEEQASQGSFVTH-GRHDILTAAIGRPEHPGRVRAVGAG---------- 1304
Query: 698 TTRFSVLGNLSNTDTAEPSQLKEEVDSLRLKL 729
T G+ S T + P L+ ++ S L L
Sbjct: 1305 ITIKQYFGSASRTSSIAPEYLQHQMQSQGLAL 1336
>Glyma12g25030.1
Length = 1739
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 486 DNIPIYFESWPKVPDSYKKECFNALKNLFHFQASEVIAKRYCYLTMGRKYRNHKLNL--- 542
D + I +E+W +VP + K + + QAS+ KR TMG ++R K +L
Sbjct: 1094 DKVDITYENWKEVPTAQKDLIWEDI------QASDSRTKRKLLQTMGERWRQFKSDLTRK 1147
Query: 543 WKLNFNPSYSREQLIEKVPNGIPEDQWPLFVDYHLKPEYMEMCQKNVEARKKQTIPHT-- 600
W L + + + +K GI +++W F P + ++ K +K+ T PH
Sbjct: 1148 WALAADQDGVEDTICDKY--GISKEKWAQFCQTRRDPSWEDVRIKAPAIQKQNTAPHVLS 1205
Query: 601 -GG-----SKLLSRRQQEMEEEAGHA------------VGRGELYIATHKKKDGSYVNAE 642
GG KLL+ + ++ +EA + V R + KK
Sbjct: 1206 RGGYDYLEQKLLAEKTKKKLQEAAQSGSVDGVIDLPSLVRRHVKWKMARTKKTREMTTEA 1265
Query: 643 ARSIVEKLEEQLGQLVNTSEI--ASNDALAKVLGP-DHAGRVRSLGLGGLHSVAFAS 696
A+ I +K++ Q S + D LA +G +H GRVR+ G G F S
Sbjct: 1266 AKEIADKIDSFEEQATQGSFVPQGCQDVLAAAIGCLEHPGRVRAAGAGVTIKQYFGS 1322