Miyakogusa Predicted Gene

Lj0g3v0303129.5

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303129.5 Non Chatacterized Hit- tr|B9SVH8|B9SVH8_RICCO
Cystathionine gamma-synthase, putative (Fragment) OS=R,81.48,3e-18,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; CYSTATHIONINE G,CUFF.20376.5
         (81 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g49660.1                                                        94   2e-20
Glyma09g37020.1                                                        94   3e-20
Glyma09g37020.3                                                        93   6e-20
Glyma09g37020.2                                                        93   6e-20
Glyma03g28530.1                                                        47   4e-06

>Glyma18g49660.1 
          Length = 568

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 22  LEAHPKVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           LE H  V LFFTESPTNPFLRCVDIKLVSELCH+ G L+CIDGTFA+ LNQK L L + L
Sbjct: 319 LEQH-NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADL 377



 Score = 53.9 bits (128), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNST +RMA+LLEAHPKV  +++   P++P
Sbjct: 430 MKTLHLRVQQQNSTGMRMAELLEAHPKVKRVYYPGLPSHP 469


>Glyma09g37020.1 
          Length = 536

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 22  LEAHPKVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           LE H  V LFFTESPTNPFLRCVDIKLVSELCH+ G L+CIDGTFA+ LNQK L L + L
Sbjct: 287 LEQH-NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADL 345



 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNST +RMAKLLEAHPKV  +++   P++P
Sbjct: 398 MKTLHLRVQQQNSTGMRMAKLLEAHPKVKRVYYPGLPSHP 437


>Glyma09g37020.3 
          Length = 459

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 22  LEAHPKVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           LE H  V LFFTESPTNPFLRCVDIKLVSELCH+ G L+CIDGTFA+ LNQK L L + L
Sbjct: 287 LEQH-NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADL 345



 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNST +RMAKLLEAHPKV  +++   P++P
Sbjct: 398 MKTLHLRVQQQNSTGMRMAKLLEAHPKVKRVYYPGLPSHP 437


>Glyma09g37020.2 
          Length = 459

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 22  LEAHPKVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           LE H  V LFFTESPTNPFLRCVDIKLVSELCH+ G L+CIDGTFA+ LNQK L L + L
Sbjct: 287 LEQH-NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADL 345



 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNST +RMAKLLEAHPKV  +++   P++P
Sbjct: 398 MKTLHLRVQQQNSTGMRMAKLLEAHPKVKRVYYPGLPSHP 437


>Glyma03g28530.1 
          Length = 468

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query: 26  PKVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFAS 68
           PK  L + ESPTNP L+  DI+ +SE+ H +GALV +D +  S
Sbjct: 220 PKTKLVWLESPTNPRLQISDIQKISEIAHSHGALVLVDNSIMS 262