Miyakogusa Predicted Gene

Lj0g3v0302739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0302739.1 Non Chatacterized Hit- tr|I1N6E5|I1N6E5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.79,0,coiled-coil,NULL; TRM1: N2,N2-dimethylguanosine tRNA
methyltransfera,tRNA (guanine(26)-N(2))-dimethy,CUFF.20348.1
         (588 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g04230.1                                                       974   0.0  
Glyma13g06680.2                                                       973   0.0  
Glyma13g06680.1                                                       973   0.0  
Glyma13g06680.3                                                       959   0.0  
Glyma06g14930.1                                                       100   6e-21
Glyma08g27580.1                                                        91   3e-18

>Glyma19g04230.1 
          Length = 582

 Score =  974 bits (2519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/593 (82%), Positives = 522/593 (88%), Gaps = 16/593 (2%)

Query: 1   MAMDLNDYKIIKEGEAEILMQPENEVFYNKAQVNNRDMSIAVLRAFILKRKQEHEAMLLS 60
           M+ DL+DYKIIKEGEAEILM  +NEVFYNK QVNNRD+SIAVLR FI KRKQEHEA  LS
Sbjct: 1   MSSDLSDYKIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEA-YLS 59

Query: 61  KRTKAAKKVSESC-FSEHVVEDGPQTSLPED----GECGAQEEISPEEPGSMREEPIKTA 115
           KRTK A+KVSE+   SE V E+ P ++ PED    GEC  +EEISPEE  S  EE     
Sbjct: 60  KRTKGAQKVSENGDSSELVKEEVPDSTAPEDHKSNGECEVEEEISPEEQCSTMEE----- 114

Query: 116 EECDAEGESINVSEGKAQGELKPLRVLEALSASGLRALRYAREVEGIGQVVALDNDKASV 175
                +   INVSEGK + ELKP RVLEALSASGLR+LRYAREVEGIGQV+A+DNDKASV
Sbjct: 115 -----DSGQINVSEGKGKRELKPPRVLEALSASGLRSLRYAREVEGIGQVIAVDNDKASV 169

Query: 176 EACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVVD 235
           EACRRNIKFNGSVA SKVESHLADARVYMLTH KEFDVVDLDPYGSPS+FLDSAVQSVVD
Sbjct: 170 EACRRNIKFNGSVAASKVESHLADARVYMLTHAKEFDVVDLDPYGSPSMFLDSAVQSVVD 229

Query: 236 GGMLMCTATDMTVLCGGYAEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYIV 295
           GGMLMCTATDM VLCGG  EVCYSKYGSYPLRGKYCHEMALRI+LA IESHANRYKRYIV
Sbjct: 230 GGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVLACIESHANRYKRYIV 289

Query: 296 PVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNNSARY 355
           PVLSVQMDFY+RVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKN S RY
Sbjct: 290 PVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNTSVRY 349

Query: 356 LPGHGPIVPQECTHCGKKFNMGGPIWSAPIHDQEWVTSMLADVKSMKDRYPAYDRISAVL 415
           LPG GP+VPQEC  CGKKFNMGGPIWSAPIHDQEWV ++LADVKSMKDRYPAYDRISAVL
Sbjct: 350 LPGFGPVVPQECRDCGKKFNMGGPIWSAPIHDQEWVAAILADVKSMKDRYPAYDRISAVL 409

Query: 416 TTISEELLHVPLFLSLHNLGATLKCTSPSAVVFRSAVINAGYLISGTHASPLGLKSDAPM 475
           TTISEEL  VPLFLSLHNL ATLKCTSPSA++FRSAVINAGY ISGTH +PLGLKSDAPM
Sbjct: 410 TTISEELPDVPLFLSLHNLCATLKCTSPSAIIFRSAVINAGYRISGTHVNPLGLKSDAPM 469

Query: 476 DVIWDIMRCWVKTHPVKAQPADLPGSVILSKEPVLQANFARAVASLSKAQVKKVARFLPN 535
           DVIWDIMRCWVK HPVK QPAD PGS+IL+KEPVLQANFARAVASLSKAQ KKVARFLPN
Sbjct: 470 DVIWDIMRCWVKNHPVKPQPADQPGSIILAKEPVLQANFARAVASLSKAQAKKVARFLPN 529

Query: 536 PESHWGPKLRAGRQITSKHVSILGQAAVDVALNQENNEESKSKIQKTEDNITA 588
           PE HWGPKLRAGRQITSKHVS+LG  A++ ALNQE++EE KSK  KTED++T+
Sbjct: 530 PERHWGPKLRAGRQITSKHVSLLGPEAINGALNQEDDEEPKSKKPKTEDSVTS 582


>Glyma13g06680.2 
          Length = 593

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/594 (81%), Positives = 521/594 (87%), Gaps = 7/594 (1%)

Query: 1   MAMDLNDYKIIKEGEAEILMQPENEVFYNKAQVNNRDMSIAVLRAFILKRKQEHEAMLLS 60
           M+ DL+DYKIIKEGEAEILM  +NEVFYNK QVNNRD+SIAVLR FI KRKQEHEA  LS
Sbjct: 1   MSSDLSDYKIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEA-YLS 59

Query: 61  KRTKAAKKVSESC-FSEHVVEDGPQTSLPE----DGECGAQEEISPEEPGSMREE-PIKT 114
           KRTK A+K SE+   SE V E+ P T+  E    +GEC  +EEISPEE  S  EE  +K 
Sbjct: 60  KRTKGAQKASENGDSSELVKEEVPDTTAQEYHKSNGECEVEEEISPEERCSTVEEGSVKV 119

Query: 115 AEECDAEGESINVSEGKAQGELKPLRVLEALSASGLRALRYAREVEGIGQVVALDNDKAS 174
            EEC       N+SEGK + ELKP RVLEALSASGLR+LRYAREVEGIGQV+A+DNDKAS
Sbjct: 120 TEECSTAEGHTNLSEGKGKRELKPPRVLEALSASGLRSLRYAREVEGIGQVIAVDNDKAS 179

Query: 175 VEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVV 234
           VEACRRNIKFNGSVA SKVESHL DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQS V
Sbjct: 180 VEACRRNIKFNGSVAASKVESHLDDARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSTV 239

Query: 235 DGGMLMCTATDMTVLCGGYAEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYI 294
           DGGMLMCTATDM VLCGG  EVCYSKYGSYPLRGKYCHEMALRI+LA IESHANRYKRYI
Sbjct: 240 DGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVLACIESHANRYKRYI 299

Query: 295 VPVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNNSAR 354
           VPVLSVQMDFY+RVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKN S R
Sbjct: 300 VPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNTSVR 359

Query: 355 YLPGHGPIVPQECTHCGKKFNMGGPIWSAPIHDQEWVTSMLADVKSMKDRYPAYDRISAV 414
           YLPG GP+VPQEC+ CGKKFNMGGPIWSAPIHDQEWV ++LADVK MKDRYPAYDRISAV
Sbjct: 360 YLPGFGPVVPQECSDCGKKFNMGGPIWSAPIHDQEWVAAILADVKYMKDRYPAYDRISAV 419

Query: 415 LTTISEELLHVPLFLSLHNLGATLKCTSPSAVVFRSAVINAGYLISGTHASPLGLKSDAP 474
           LTTISEEL  VPLFLSLHNL ATLKCTSPSA++FRSAVINAGY ISGTH +PLGLKSDAP
Sbjct: 420 LTTISEELPDVPLFLSLHNLCATLKCTSPSAIIFRSAVINAGYRISGTHVNPLGLKSDAP 479

Query: 475 MDVIWDIMRCWVKTHPVKAQPADLPGSVILSKEPVLQANFARAVASLSKAQVKKVARFLP 534
           MDVIWDIMRCWVK HPVK QPAD PGS+IL+KEP LQANFARAVASLSKAQ KKVARFLP
Sbjct: 480 MDVIWDIMRCWVKNHPVKPQPADQPGSIILAKEPALQANFARAVASLSKAQAKKVARFLP 539

Query: 535 NPESHWGPKLRAGRQITSKHVSILGQAAVDVALNQENNEESKSKIQKTEDNITA 588
           NPE HWGPKLRAGRQITSKHVS+LG  A++ ALNQE++EE KSK  +TED++T+
Sbjct: 540 NPERHWGPKLRAGRQITSKHVSLLGPDAINGALNQEDDEEPKSKKSRTEDSVTS 593


>Glyma13g06680.1 
          Length = 593

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/594 (81%), Positives = 521/594 (87%), Gaps = 7/594 (1%)

Query: 1   MAMDLNDYKIIKEGEAEILMQPENEVFYNKAQVNNRDMSIAVLRAFILKRKQEHEAMLLS 60
           M+ DL+DYKIIKEGEAEILM  +NEVFYNK QVNNRD+SIAVLR FI KRKQEHEA  LS
Sbjct: 1   MSSDLSDYKIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEA-YLS 59

Query: 61  KRTKAAKKVSESC-FSEHVVEDGPQTSLPE----DGECGAQEEISPEEPGSMREE-PIKT 114
           KRTK A+K SE+   SE V E+ P T+  E    +GEC  +EEISPEE  S  EE  +K 
Sbjct: 60  KRTKGAQKASENGDSSELVKEEVPDTTAQEYHKSNGECEVEEEISPEERCSTVEEGSVKV 119

Query: 115 AEECDAEGESINVSEGKAQGELKPLRVLEALSASGLRALRYAREVEGIGQVVALDNDKAS 174
            EEC       N+SEGK + ELKP RVLEALSASGLR+LRYAREVEGIGQV+A+DNDKAS
Sbjct: 120 TEECSTAEGHTNLSEGKGKRELKPPRVLEALSASGLRSLRYAREVEGIGQVIAVDNDKAS 179

Query: 175 VEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVV 234
           VEACRRNIKFNGSVA SKVESHL DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQS V
Sbjct: 180 VEACRRNIKFNGSVAASKVESHLDDARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSTV 239

Query: 235 DGGMLMCTATDMTVLCGGYAEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYI 294
           DGGMLMCTATDM VLCGG  EVCYSKYGSYPLRGKYCHEMALRI+LA IESHANRYKRYI
Sbjct: 240 DGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVLACIESHANRYKRYI 299

Query: 295 VPVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNNSAR 354
           VPVLSVQMDFY+RVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKN S R
Sbjct: 300 VPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNTSVR 359

Query: 355 YLPGHGPIVPQECTHCGKKFNMGGPIWSAPIHDQEWVTSMLADVKSMKDRYPAYDRISAV 414
           YLPG GP+VPQEC+ CGKKFNMGGPIWSAPIHDQEWV ++LADVK MKDRYPAYDRISAV
Sbjct: 360 YLPGFGPVVPQECSDCGKKFNMGGPIWSAPIHDQEWVAAILADVKYMKDRYPAYDRISAV 419

Query: 415 LTTISEELLHVPLFLSLHNLGATLKCTSPSAVVFRSAVINAGYLISGTHASPLGLKSDAP 474
           LTTISEEL  VPLFLSLHNL ATLKCTSPSA++FRSAVINAGY ISGTH +PLGLKSDAP
Sbjct: 420 LTTISEELPDVPLFLSLHNLCATLKCTSPSAIIFRSAVINAGYRISGTHVNPLGLKSDAP 479

Query: 475 MDVIWDIMRCWVKTHPVKAQPADLPGSVILSKEPVLQANFARAVASLSKAQVKKVARFLP 534
           MDVIWDIMRCWVK HPVK QPAD PGS+IL+KEP LQANFARAVASLSKAQ KKVARFLP
Sbjct: 480 MDVIWDIMRCWVKNHPVKPQPADQPGSIILAKEPALQANFARAVASLSKAQAKKVARFLP 539

Query: 535 NPESHWGPKLRAGRQITSKHVSILGQAAVDVALNQENNEESKSKIQKTEDNITA 588
           NPE HWGPKLRAGRQITSKHVS+LG  A++ ALNQE++EE KSK  +TED++T+
Sbjct: 540 NPERHWGPKLRAGRQITSKHVSLLGPDAINGALNQEDDEEPKSKKSRTEDSVTS 593


>Glyma13g06680.3 
          Length = 582

 Score =  959 bits (2480), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/582 (82%), Positives = 511/582 (87%), Gaps = 7/582 (1%)

Query: 1   MAMDLNDYKIIKEGEAEILMQPENEVFYNKAQVNNRDMSIAVLRAFILKRKQEHEAMLLS 60
           M+ DL+DYKIIKEGEAEILM  +NEVFYNK QVNNRD+SIAVLR FI KRKQEHEA  LS
Sbjct: 1   MSSDLSDYKIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEA-YLS 59

Query: 61  KRTKAAKKVSESC-FSEHVVEDGPQTSLPE----DGECGAQEEISPEEPGSMREE-PIKT 114
           KRTK A+K SE+   SE V E+ P T+  E    +GEC  +EEISPEE  S  EE  +K 
Sbjct: 60  KRTKGAQKASENGDSSELVKEEVPDTTAQEYHKSNGECEVEEEISPEERCSTVEEGSVKV 119

Query: 115 AEECDAEGESINVSEGKAQGELKPLRVLEALSASGLRALRYAREVEGIGQVVALDNDKAS 174
            EEC       N+SEGK + ELKP RVLEALSASGLR+LRYAREVEGIGQV+A+DNDKAS
Sbjct: 120 TEECSTAEGHTNLSEGKGKRELKPPRVLEALSASGLRSLRYAREVEGIGQVIAVDNDKAS 179

Query: 175 VEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVV 234
           VEACRRNIKFNGSVA SKVESHL DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQS V
Sbjct: 180 VEACRRNIKFNGSVAASKVESHLDDARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSTV 239

Query: 235 DGGMLMCTATDMTVLCGGYAEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYI 294
           DGGMLMCTATDM VLCGG  EVCYSKYGSYPLRGKYCHEMALRI+LA IESHANRYKRYI
Sbjct: 240 DGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVLACIESHANRYKRYI 299

Query: 295 VPVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNNSAR 354
           VPVLSVQMDFY+RVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKN S R
Sbjct: 300 VPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNTSVR 359

Query: 355 YLPGHGPIVPQECTHCGKKFNMGGPIWSAPIHDQEWVTSMLADVKSMKDRYPAYDRISAV 414
           YLPG GP+VPQEC+ CGKKFNMGGPIWSAPIHDQEWV ++LADVK MKDRYPAYDRISAV
Sbjct: 360 YLPGFGPVVPQECSDCGKKFNMGGPIWSAPIHDQEWVAAILADVKYMKDRYPAYDRISAV 419

Query: 415 LTTISEELLHVPLFLSLHNLGATLKCTSPSAVVFRSAVINAGYLISGTHASPLGLKSDAP 474
           LTTISEEL  VPLFLSLHNL ATLKCTSPSA++FRSAVINAGY ISGTH +PLGLKSDAP
Sbjct: 420 LTTISEELPDVPLFLSLHNLCATLKCTSPSAIIFRSAVINAGYRISGTHVNPLGLKSDAP 479

Query: 475 MDVIWDIMRCWVKTHPVKAQPADLPGSVILSKEPVLQANFARAVASLSKAQVKKVARFLP 534
           MDVIWDIMRCWVK HPVK QPAD PGS+IL+KEP LQANFARAVASLSKAQ KKVARFLP
Sbjct: 480 MDVIWDIMRCWVKNHPVKPQPADQPGSIILAKEPALQANFARAVASLSKAQAKKVARFLP 539

Query: 535 NPESHWGPKLRAGRQITSKHVSILGQAAVDVALNQENNEESK 576
           NPE HWGPKLRAGRQITSKHVS+LG  A++ ALNQE++EE K
Sbjct: 540 NPERHWGPKLRAGRQITSKHVSLLGPDAINGALNQEDDEEPK 581


>Glyma06g14930.1 
          Length = 432

 Score =  100 bits (248), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 151/347 (43%), Gaps = 28/347 (8%)

Query: 139 LRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA 198
           LRVL+AL   G+R+LRY  E E         N+          ++ +       V +HL 
Sbjct: 86  LRVLDALCGCGIRSLRYLAEAEADFVAANDGNEDYGSTIVENLMRVSAEEEGRWVVTHLE 145

Query: 199 DARVYMLTHPKE--FDVVDLDPYGSPSVFLDSAVQSVVDGGMLMCTATDMTVLCGGYAEV 256
             RV M  + ++  FD +D+D +GS S FL SA+ ++  GG+L  T+TD     G     
Sbjct: 146 ANRVMMDYYLQKSFFDFIDVDSFGSDSSFLRSAICTLKLGGLLYVTSTDGFSSGGHRPHH 205

Query: 257 CYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFY---VRVFVRIY 313
             + YG+Y     Y +E+ LR+L+  +   A     +I P+ S    F+    RV +R+ 
Sbjct: 206 SLAAYGAYVRPMPYSNEIGLRMLIGGVAREAALLGYHITPLFSYYA-FHGPVFRVLLRLN 264

Query: 314 TSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNNSARYLPGHGPIVPQECTHCGKK 373
                       + Y +QC     F    +G+ IS + S        P V          
Sbjct: 265 RGKIHDSRHYGYIGYCHQCGNSHEFSWDRLGQ-ISCSCST-------PKVSNSLV----- 311

Query: 374 FNMGGPIWSAPIHDQEWVTSMLADVKSMK----DRYPAYDRISAVLTTISEELLHVPL-F 428
             + GP+W+ P+HD  ++T+ML   K  K    D   + +++  ++   S+  L  P  +
Sbjct: 312 --VSGPLWTGPLHDAAYLTNMLNLAKQWKWIVDDGKDSLEKLIKLMVDESDPKL--PFGY 367

Query: 429 LSLHNLGATLKCTSPSAVVFRSAVINAGYLISGTHASPLGLKSDAPM 475
           + L  + +  K  SP      SA+   GY  S +H     +K++ PM
Sbjct: 368 IKLDEMASRAKINSPPLKALMSAMHQKGYAASRSHIETNAIKTNCPM 414


>Glyma08g27580.1 
          Length = 84

 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 67/94 (71%), Gaps = 13/94 (13%)

Query: 38  MSIAVLRAFILKRKQEHEAMLLSKRTKAAKKVSESCFSEHVVEDGPQTSLPEDGECGAQE 97
           MSIA+LRAFI KRKQEHEAML  KRTKAA+KVSE+  SE V+EDG    LP+  EC   +
Sbjct: 1   MSIAILRAFISKRKQEHEAMLY-KRTKAAQKVSENGISEPVMEDGAHAFLPK--EC---D 54

Query: 98  EISPEEPGSMREEPIKTAEECDAEGESINVSEGK 131
           E+S EEP S       T EECDA GESI++S GK
Sbjct: 55  EVSMEEPCS-------TTEECDAVGESIDISYGK 81