Miyakogusa Predicted Gene

Lj0g3v0302439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0302439.1 Non Chatacterized Hit- tr|I1KYK4|I1KYK4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,80.03,0,seg,NULL; CAF1,Ribonuclease CAF1; UNCHARACTERIZED,NULL;
POLY(A)-SPECIFIC RIBONUCLEASE/TARGET OF EGR1,CUFF.20326.1
         (713 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g44260.1                                                       951   0.0  
Glyma18g08430.1                                                       925   0.0  
Glyma15g21190.1                                                        79   2e-14

>Glyma08g44260.1 
          Length = 575

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/555 (81%), Positives = 503/555 (90%), Gaps = 3/555 (0%)

Query: 28  FPLKTVTTANFEPSLVDLRRHVRSSDFVAIDLEMTGITSAPWRESLEFDRSDVRYLKVRD 87
           FP KTVTTANFEPSL +LR HVR SDFVAIDLEMTG+TSAPWRESL FDRSDVRYLKVRD
Sbjct: 23  FPSKTVTTANFEPSLAELRHHVRCSDFVAIDLEMTGVTSAPWRESLAFDRSDVRYLKVRD 82

Query: 88  SATRFAVVQFGVCPFRWDPSNNSFLAYPYNFYVFPRQELAGFGPCNEFLCQTTSMDFLAK 147
           SA +FAVVQFGVCPFRWDPSN+SF+A+P+NFYVFPRQE+AG GPC+EFLCQTTSMDFLAK
Sbjct: 83  SAAKFAVVQFGVCPFRWDPSNHSFVAHPHNFYVFPRQEIAGLGPCDEFLCQTTSMDFLAK 142

Query: 148 YQFDFNVCIHEGISYLSREQEREAIRRLNSTYDS-ERPDICKLKDVRDIPLLSMADTLFT 206
           YQFDFN CIHEGISYLSREQEREA+R LNSTYDS E  DI KLK+VRDIPLLS AD LFT
Sbjct: 143 YQFDFNACIHEGISYLSREQEREALRSLNSTYDSSEWSDIGKLKNVRDIPLLSTADILFT 202

Query: 207 ARMKSKFSEWRDGLLHEQNQEDRIQKISEDSKEQFQVMFFKLQPALRLNGFTSHQLKLIQ 266
           ARMK+KF EWRDGL  EQNQED+IQ IS+DSK  FQV FF++ PALRLNGFTSHQLKLIQ
Sbjct: 203 ARMKNKFGEWRDGLFQEQNQEDQIQGISKDSK--FQVTFFEMHPALRLNGFTSHQLKLIQ 260

Query: 267 LVIRKNFKDLYYVSVNTEASGSQQIVLYTDSKDELNLIMKEVKDENHRMEEMKIQTAVGF 326
           LVIRK+FKDL YVSVN+E SGSQQ+V+YTDSKDELNL++K+VK+ENHR EE KIQ AVGF
Sbjct: 261 LVIRKHFKDLSYVSVNSETSGSQQLVVYTDSKDELNLLLKKVKEENHRAEEKKIQAAVGF 320

Query: 327 RHVIDLLSSEQKLIVGHNCLLDIAHVYNKFIRPLPETPEEFVASVNKCFPNIVDTKILLN 386
           RHVIDLLSSEQKLIVG+NC LDIAHVY+KFI PLP +P+EFVASVNKCFP+IVDT ILLN
Sbjct: 321 RHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGSPDEFVASVNKCFPHIVDTIILLN 380

Query: 387 TNSMLQGRMRGSRKSLASAFSLFCPQIAAGSGNTEPGSPSHVKVDIEVDDSRSSTWNPGG 446
           TN M Q +M+ SRKSLASAF+LFCPQIAAGS +T+ GS SHVKVD+EVD SRS +WNPGG
Sbjct: 381 TNLMFQEKMKRSRKSLASAFTLFCPQIAAGSRSTDLGSLSHVKVDVEVDGSRSCSWNPGG 440

Query: 447 KHEAGYDAFMTGCVFTQLCSDLGVDFKLHESSKELALNEKLQKYVNHLYISWMHGDIIDL 506
           KHEAGYDAFMTGC+F QLCSDLG+DFKL +SS +LALNEKLQKYVN LY+SW+HGDIIDL
Sbjct: 441 KHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDL 500

Query: 507 STGDKVADSSPSYSLKRRYPQILFENIVIMWGFPSKLKANEIRNCISLVFGSSSVVSIYH 566
           +TG+KVADSSPS+SLK+RYP ILFENIVI+WGFPSKLKANE+R CIS  FG +SVVS++H
Sbjct: 501 NTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECISKAFGPTSVVSVFH 560

Query: 567 LDSTAVFVQFSKTNL 581
           LD+TA FVQFSKT L
Sbjct: 561 LDATAAFVQFSKTEL 575


>Glyma18g08430.1 
          Length = 671

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/598 (76%), Positives = 508/598 (84%), Gaps = 22/598 (3%)

Query: 116 YNFYVFPRQELAGFGPCNEFLCQTTSMDFLAKYQFDFNVCIHEGISYLSREQEREAIRRL 175
           +NFYVFPRQ+LAG GPC+EFLCQTTSMDFLAKYQFDFN CIHEGISYLSREQER+A+R L
Sbjct: 96  HNFYVFPRQQLAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSL 155

Query: 176 NSTYDSERPDICKLKDVRDIPLLSMADTLFTARMKSKFSEWRDGLLHEQNQEDRIQKISE 235
           NSTYDSE  DI KLKDVRDIPLLS AD LFTARMK+KFSEWRDGL  EQNQED+IQ IS 
Sbjct: 156 NSTYDSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISN 215

Query: 236 DSKEQFQVMFFKLQPALRLNGFTSHQLKLIQLVIRKNFKDLYYVSVNTEASGSQQIVLYT 295
           DSK  FQV FF++ PALRLN FTSHQLKLIQL+IRK+FKDL YVSVN+EASGSQQ+V+YT
Sbjct: 216 DSK--FQVTFFEMHPALRLNRFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYT 273

Query: 296 DSKDELNLIMKEVKDENHRMEEMKIQTAVGFRHVIDLLSSEQKLIVGHNCLLDIAHVYNK 355
           D KDELNL++K+VK+ENHR EEMKIQ AVGFRHVIDLLSSEQKLIVG+NC LDIAHVY+K
Sbjct: 274 DLKDELNLLLKKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSK 333

Query: 356 FIRPLPETPEEFVASVNKCFPNIVDTKILLNTNSMLQGRMRGSRKSLASAFSLFCPQIAA 415
           FI PLP TPEEFVASV+KCFP+IVDTKILL+TN M Q +M+ SRKSLASAF+ FCPQIAA
Sbjct: 334 FIGPLPGTPEEFVASVSKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAA 393

Query: 416 GSGNTEPGSPSHVKVDIEVDDSRSSTWNPGGKHEAGYDAFMTGCVFTQLCSDLGVDFKLH 475
           GS +T+ GS SHVKV++EVDDSRS +W+PGGKHEAGYDAFMTGC+F QLCSDLG+DFKLH
Sbjct: 394 GSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLH 453

Query: 476 ESSKELALNEKLQKYVNHLYISWMHGDIIDLSTGDKVADSSPSYSLKRRYPQILFENIVI 535
           +SSK LALNEKLQKYVN LY+SWMH DIIDL+TG+KVADSS   SL +RYP+I+FENIVI
Sbjct: 454 DSSKPLALNEKLQKYVNRLYLSWMHRDIIDLNTGNKVADSSLR-SLTKRYPKIMFENIVI 512

Query: 536 MWGFPSKLKANEIRNCISLVFGSSSVVSIYHLDSTAVFVQFSKTNLVSDFLLLKDTLERS 595
           +WGF SKLKANEIR CIS VFG +SVVS++HLD+TA FVQ                   S
Sbjct: 513 IWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQ-------------------S 553

Query: 596 DGPILVLHPLAKLLEGGNTCAANYDAYREICGSTLSESLFADQAKAVGITWKTKLMECKV 655
            G I VLHPL+KLLEGGNTC ANYD YREICGS+LSE LFADQA+AVGI WKTKL E KV
Sbjct: 554 GGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKV 613

Query: 656 TLGSEEHENQSEQGNVNTAMKFVGKTKPNTIDQLRNSPPHGQVSPFEIEDSCAAEANL 713
               +EHEN S Q NVNT MK V +TKPNTIDQL N+P  GQVS FEIEDS  AEANL
Sbjct: 614 ASRGKEHENPSVQDNVNTVMKNVERTKPNTIDQLGNAPSCGQVSTFEIEDSYVAEANL 671


>Glyma15g21190.1 
          Length = 166

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 46/56 (82%), Gaps = 2/56 (3%)

Query: 305 MKEVKDENHRMEEMKIQTAVGFRHVIDLLSSEQKLIVGHNCLLDIAHVYNKFIRPL 360
           +K+VK+ENHR EE KIQ AVGFRHVIDLLSS+QKLIVG+NC LD   +Y+  I+ L
Sbjct: 78  VKKVKEENHRAEEKKIQAAVGFRHVIDLLSSKQKLIVGYNCFLD--DIYHSMIQIL 131