Miyakogusa Predicted Gene

Lj0g3v0301929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301929.1 Non Chatacterized Hit- tr|K0K9P2|K0K9P2_9PSEU
Putative deacetylase OS=Saccharothrix espanaensis DSM
,40.28,8e-18,Hist_deacetyl,Histone deacetylase domain; HISTONE
DEACETYLASE-RELATED,NULL; HISTONE DEACETYLASE,Hist,CUFF.20289.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31380.1                                                       218   2e-57
Glyma13g38940.1                                                        77   6e-15
Glyma05g00460.1                                                        50   6e-07
Glyma05g00460.2                                                        50   8e-07
Glyma05g07990.1                                                        49   2e-06
Glyma13g06010.2                                                        49   2e-06
Glyma13g06010.1                                                        49   2e-06
Glyma06g00200.2                                                        48   3e-06
Glyma17g13000.1                                                        48   3e-06
Glyma05g02540.1                                                        48   4e-06
Glyma17g09320.1                                                        47   6e-06
Glyma11g00220.5                                                        47   6e-06
Glyma01g45660.2                                                        47   6e-06
Glyma01g45660.1                                                        47   6e-06
Glyma11g00220.3                                                        47   7e-06
Glyma11g00220.2                                                        47   7e-06
Glyma11g00220.4                                                        47   8e-06
Glyma11g00220.1                                                        47   8e-06

>Glyma12g31380.1 
          Length = 381

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/162 (70%), Positives = 121/162 (74%), Gaps = 36/162 (22%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  FLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRS+KV+TISLHMNHGSWGP
Sbjct: 163 GYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGP 222

Query: 69  SHPQSGS-----------------------------------VPSIQKFGPDVIVLVIIG 93
           SHPQSGS                                   VPSIQKFGPD+IVLV +G
Sbjct: 223 SHPQSGSVDELGEGEGYGFNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLV-LG 281

Query: 94  QDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQ 135
           QDS+AFDPNGRQCLTMEGYREIGRIVH LA +HS GRLLIVQ
Sbjct: 282 QDSNAFDPNGRQCLTMEGYREIGRIVHLLAKRHSAGRLLIVQ 323


>Glyma13g38940.1 
          Length = 155

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/43 (86%), Positives = 39/43 (90%), Gaps = 1/43 (2%)

Query: 12 FLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKV 54
          FL NAGLAVQ +LDSGCK V +IDIDVHYGNGTAEGFYRSDKV
Sbjct: 6  FLKNAGLAVQ-SLDSGCKMVVIIDIDVHYGNGTAEGFYRSDKV 47


>Glyma05g00460.1 
          Length = 656

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 45/167 (26%)

Query: 8   MGTGFLNNAGLAVQLALDS----GCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNH 63
           MG    NN  +A +  LD     G KK+ ++D DVH+GNGT + F+   +V+  S+H + 
Sbjct: 157 MGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHE 216

Query: 64  -GSWGPSHP---------------------QSGS--------------VPSIQKFGPDVI 87
            GS+ P++                      ++G               +P  ++F PD+I
Sbjct: 217 FGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDII 276

Query: 88  VLVIIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIV 134
           + V  G D++  DP G   +T  GY  +   +   A    +GR++++
Sbjct: 277 I-VSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFA----EGRIVLI 318


>Glyma05g00460.2 
          Length = 513

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 45/167 (26%)

Query: 8   MGTGFLNNAGLAVQLALDS----GCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNH 63
           MG    NN  +A +  LD     G KK+ ++D DVH+GNGT + F+   +V+  S+H + 
Sbjct: 157 MGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHE 216

Query: 64  -GSWGPSHP---------------------QSGS--------------VPSIQKFGPDVI 87
            GS+ P++                      ++G               +P  ++F PD+I
Sbjct: 217 FGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDII 276

Query: 88  VLVIIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIV 134
           + V  G D++  DP G   +T  GY  +   +   A    +GR++++
Sbjct: 277 I-VSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFA----EGRIVLI 318


>Glyma05g07990.1 
          Length = 495

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 43/163 (26%)

Query: 8   MGTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWG 67
           MG    NNA +A   A  +G +KV ++D DVH+GNGT E F ++  V+ ISLH + G  G
Sbjct: 212 MGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEG--G 269

Query: 68  PSHPQSGS------------------------------------VPSIQKFGPDVIVLVI 91
             +P +G+                                    +P   +F PD + +V 
Sbjct: 270 KFYPGTGAAEEVGSMGAEGFCVNIPWSQGGVGDNDYIFAFQHVVLPIAAEFNPD-LTIVS 328

Query: 92  IGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIV 134
            G D++  DP G   +T  GY  +  +++ L    S G+LL++
Sbjct: 329 AGFDAARGDPLGCCDITPSGYAHMTNMLNAL----SGGKLLVI 367


>Glyma13g06010.2 
          Length = 497

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G V  I
Sbjct: 212 YFPGTGDVRDI 222


>Glyma13g06010.1 
          Length = 497

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G V  I
Sbjct: 212 YFPGTGDVRDI 222


>Glyma06g00200.2 
          Length = 329

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G V  I
Sbjct: 212 YFPGTGDVRDI 222


>Glyma17g13000.1 
          Length = 504

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 43/163 (26%)

Query: 8   MGTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWG 67
           MG    NNA +A   A  +G +KV ++D DVH+GNGT E F ++  V+ ISLH + G  G
Sbjct: 243 MGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEG--G 300

Query: 68  PSHPQSGS------------------------------------VPSIQKFGPDVIVLVI 91
             +P +G+                                    +P   +F PD   +V 
Sbjct: 301 KFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFSFQHVVLPIAAEFNPD-FTIVS 359

Query: 92  IGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIV 134
            G D++  DP G   +T  GY  +  +++ L    S G+LL++
Sbjct: 360 AGFDAARGDPLGCCDITPSGYAHMTHMLNAL----SGGKLLVI 398


>Glyma05g02540.1 
          Length = 476

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 4/51 (7%)

Query: 29  KKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGPSHPQSGSVPSI 79
           ++V  +DIDVH+G+G  E FY +D+V+T+S H     +G   P +G V  I
Sbjct: 191 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH----KFGDFFPGTGHVKDI 237


>Glyma17g09320.1 
          Length = 472

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  L + L L    ++V  +DIDVH+G+G  E FY +D+V+T+S H     +G 
Sbjct: 168 GFCYVNDIVLGI-LELLKAHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH----KFGD 222

Query: 69  SHPQSGSVPSI 79
             P +G V  I
Sbjct: 223 FFPGTGHVKDI 233


>Glyma11g00220.5 
          Length = 488

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma01g45660.2 
          Length = 497

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma01g45660.1 
          Length = 497

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma11g00220.3 
          Length = 473

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma11g00220.2 
          Length = 473

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma11g00220.4 
          Length = 497

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222


>Glyma11g00220.1 
          Length = 497

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 9   GTGFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVITISLHMNHGSWGP 68
           G  ++N+  LA+ L L    ++V  +DID+H+G+G  E FY +D+V+T+S H     +G 
Sbjct: 157 GFCYVNDIVLAI-LELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFH----KFGD 211

Query: 69  SHPQSGSVPSI 79
             P +G +  I
Sbjct: 212 YFPGTGDIRDI 222