Miyakogusa Predicted Gene

Lj0g3v0300899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300899.1 tr|I0Z284|I0Z284_9CHLO Photosystem I reaction
centre subunit VI OS=Coccomyxa subellipsoidea C-169 PE,45.95,1e-18,no
description,NULL; PSI_PsaH,Photosystem I PsaH, reaction centre subunit
VI; seg,NULL,CUFF.20342.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g02240.2                                                       207   4e-54
Glyma08g21900.1                                                       207   4e-54
Glyma07g02240.1                                                       201   3e-52
Glyma13g43370.1                                                       184   4e-47
Glyma15g01940.1                                                       182   8e-47
Glyma08g21900.2                                                       164   4e-41
Glyma11g21740.1                                                       135   1e-32
Glyma0066s00240.1                                                     112   2e-25
Glyma03g02430.1                                                        57   5e-09

>Glyma07g02240.2 
          Length = 144

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 104/125 (83%), Positives = 109/125 (87%)

Query: 1   MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
           MASLATLAAVQPA INGLAGSSL+GTKLSFK SR S+KSKNFR+GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 61  EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYYSAT 120
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR            STLAY+SAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 121 ASGDI 125
           ASGDI
Sbjct: 121 ASGDI 125


>Glyma08g21900.1 
          Length = 144

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/125 (82%), Positives = 110/125 (88%)

Query: 1   MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
           MASLATLAAVQPAA+NGLAGSSL+GTKLSFK SR ++KSKNFR+GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 61  EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYYSAT 120
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR            STLAY+SAT
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 121 ASGDI 125
           ASGDI
Sbjct: 121 ASGDI 125


>Glyma07g02240.1 
          Length = 150

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/131 (79%), Positives = 109/131 (83%), Gaps = 6/131 (4%)

Query: 1   MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNF------RNGAVVAKYGDK 54
           MASLATLAAVQPA INGLAGSSL+GTKLSFK SR S+KSKNF      R+GAVVAKYGDK
Sbjct: 1   MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFSVTKHYRSGAVVAKYGDK 60

Query: 55  SVYFDLEDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTL 114
           SVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR            STL
Sbjct: 61  SVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTL 120

Query: 115 AYYSATASGDI 125
           AY+SATASGDI
Sbjct: 121 AYFSATASGDI 131


>Glyma13g43370.1 
          Length = 139

 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 100/125 (80%), Gaps = 5/125 (4%)

Query: 1   MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
           MASLA+LA VQP+ + GLAG     TKLSFK SRQS + KNFR+GAVVAKYGDKSVYFDL
Sbjct: 1   MASLASLAVVQPSTVKGLAG-----TKLSFKPSRQSFRPKNFRSGAVVAKYGDKSVYFDL 55

Query: 61  EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYYSAT 120
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR            STLAY SAT
Sbjct: 56  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 115

Query: 121 ASGDI 125
           ASGDI
Sbjct: 116 ASGDI 120


>Glyma15g01940.1 
          Length = 139

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 92/125 (73%), Positives = 101/125 (80%), Gaps = 5/125 (4%)

Query: 1   MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
           MASLA+LA VQP+ + GLAG     TKLSFK SRQS + KNFR+GAVVAKYGDKSVYFDL
Sbjct: 1   MASLASLAVVQPSTVKGLAG-----TKLSFKPSRQSFRPKNFRSGAVVAKYGDKSVYFDL 55

Query: 61  EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYYSAT 120
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA+PFTKR            STLAY+S+T
Sbjct: 56  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFASPFTKRGLLLKFLILGGGSTLAYFSST 115

Query: 121 ASGDI 125
           ASGDI
Sbjct: 116 ASGDI 120


>Glyma08g21900.2 
          Length = 104

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 86/94 (91%)

Query: 1  MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
          MASLATLAAVQPAA+NGLAGSSL+GTKLSFK SR ++KSKNFR+GAVVAKYGDKSVYFDL
Sbjct: 1  MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 61 EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAA 94
          ED+GNTTGQWDLYGSDAPSPYN LQ   F T A+
Sbjct: 61 EDLGNTTGQWDLYGSDAPSPYNPLQVCCFFTCAS 94


>Glyma11g21740.1 
          Length = 85

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/85 (76%), Positives = 70/85 (82%)

Query: 1  MASLATLAAVQPAAINGLAGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDL 60
          MASLA+L  VQP+ I GLAGSSL GTKLSFK S QS + KNFRNG VVA YGDKSVYFDL
Sbjct: 1  MASLASLDIVQPSTIKGLAGSSLTGTKLSFKPSHQSFRPKNFRNGVVVANYGDKSVYFDL 60

Query: 61 EDIGNTTGQWDLYGSDAPSPYNSLQ 85
          ED+GNT GQWDLY  DAPSPYN L+
Sbjct: 61 EDLGNTIGQWDLYVFDAPSPYNPLR 85


>Glyma0066s00240.1 
          Length = 111

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 3/74 (4%)

Query: 15 INGL---AGSSLNGTKLSFKSSRQSIKSKNFRNGAVVAKYGDKSVYFDLEDIGNTTGQWD 71
          IN L   A SSL  TKLSFK S QS + KNFR+G VVAKYGDKS+YFDL+D+GNTT QWD
Sbjct: 3  INHLLLRALSSLTRTKLSFKPSHQSFRPKNFRSGVVVAKYGDKSMYFDLKDLGNTTSQWD 62

Query: 72 LYGSDAPSPYNSLQ 85
          LYGSDAPSPYN+LQ
Sbjct: 63 LYGSDAPSPYNTLQ 76


>Glyma03g02430.1 
          Length = 30

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 27/29 (93%)

Query: 43 RNGAVVAKYGDKSVYFDLEDIGNTTGQWD 71
          R+G VVAKYGDK+VYFDLED+GNT GQWD
Sbjct: 1  RSGVVVAKYGDKNVYFDLEDLGNTIGQWD 29