Miyakogusa Predicted Gene

Lj0g3v0300879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300879.1 Non Chatacterized Hit- tr|A3A9U0|A3A9U0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.03,9e-19,seg,NULL,CUFF.20223.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g12810.1                                                       150   1e-36
Glyma08g22090.1                                                        75   8e-14
Glyma07g00800.1                                                        68   1e-11

>Glyma12g12810.1 
          Length = 231

 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/276 (42%), Positives = 147/276 (53%), Gaps = 65/276 (23%)

Query: 16  ILEQGSDRIAFITGRVQTLXXXXXXXXXXXXXXXXXXXXXNTALXXXXXTGSYPHSNSPL 75
           IL+QGSDR+AFITGR+QTL                        L          H N   
Sbjct: 16  ILQQGSDRLAFITGRIQTLP---------------------DPLSSSQPQSQSHHPNV-- 52

Query: 76  CAVAEPDEDSISLLQNLDAAVETLIQSLPTVE--NEISTAPCSEIEPELVENPQAAPPDS 133
                  +DS S+ QN +    T+IQ+ P  E  NEIST P  + EPE  +  Q  PP  
Sbjct: 53  -------DDSDSISQNPEPD-NTVIQTPPKHEGENEISTVPEPKPEPEPEQF-QLQPP-- 101

Query: 134 SSLENSHYQNLQDHEQRFTIIPSDISSAINSSRGTRFFCSIIMAMWVIAAYGGLFSLLGI 193
                      Q  E +  I PSD++ +INSSR TR  CSI +A+ VI +Y   FS    
Sbjct: 102 -----------QTEEPKRFITPSDLTRSINSSRVTRLCCSIFVAILVILSYPKFFS---- 146

Query: 194 HLVKSVVIGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLSRRGSDETLASSGDWG---AQ 250
                 VI FRP+Y+VL+TN +VV ARLF+G+QRG  R   RGS      SGD G   AQ
Sbjct: 147 -----TVITFRPLYLVLVTNLTVVIARLFSGKQRGSERRDNRGS------SGDGGGEYAQ 195

Query: 251 LARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLL 286
           LA  LE+ ++ Q+V DAVFMDCAVYA+VLVCGLS+L
Sbjct: 196 LASILELCVVAQNVADAVFMDCAVYAVVLVCGLSVL 231


>Glyma08g22090.1 
          Length = 295

 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 49/296 (16%)

Query: 20  GSDRIAFITGRVQTLXXXXXXXXXXXXXXXXXXXXXNTALXXXXXTGSY-------PHSN 72
           GSDR+A ITGR+  L                     + ++                P   
Sbjct: 20  GSDRMALITGRINALPPTPPSSASSPTHRNIPRHAQSMSVAAFDSNSDDQQQHHLPPRHQ 79

Query: 73  SP--LCAVAEPDEDSISLLQ-------------NLDAAVETLIQSLPTV---ENEISTAP 114
            P  L A  +  ED  + L+             + +   E LIQ   T+    N++S   
Sbjct: 80  RPQSLSAFTDYHEDLTARLKHQGGFRYSNMESFDFNPEEEPLIQDSDTITEANNQVSEGN 139

Query: 115 CSEIEPELVENPQAAPP-DSSSLENSHYQNLQDHEQRFTIIPSDISSAINSSRGTRFFCS 173
            ++++P  V +    P  D+  L+    Q L+ ++  F     +++  I +S  TR   S
Sbjct: 140 VAKMKPPSVPSNTKNPAHDTQQLK----QPLRHNKDTF-FSSRELNICILASEPTRALSS 194

Query: 174 IIMAMWVIAAYGGLFSLLGIHLVKSVVIGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLS 233
           +I+A+ V+  Y          ++   V+  RP+YI+LLT+ ++V ARL+ G+      + 
Sbjct: 195 LIIALLVVFYY----------MISERVLASRPLYILLLTDVTIVLARLYGGK----ASVL 240

Query: 234 RRGSDETLASSGD---WGAQLARTLEIGLLLQSVLDAVFMDCAVYAIVLVCGLSLL 286
                E + ++GD   WG  + + +E GL+    +  +F+DC++Y +V+VCG SL+
Sbjct: 241 EEAEGEKVKATGDGHNWGDAV-KLMERGLVTYQAIRGLFIDCSIYLVVVVCGTSLM 295


>Glyma07g00800.1 
          Length = 309

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 30/209 (14%)

Query: 87  SLLQNLD--AAVETLIQSLPTV---ENEISTAPCSEIEP-ELVENPQAAPPDSSSLENSH 140
           S ++N D     E LIQ   T+    N++S    S+++P  +  N + +  D+  L+   
Sbjct: 122 SNMENFDFNPEEEPLIQDSDTITEASNQVSEGNASKMKPPSVTSNTKNSAHDTQQLKQPR 181

Query: 141 YQNLQDHEQRFTIIPSDISSAINSSRGTRFFCSIIMAMWVIAAYGGLFSLLGIHLVKSVV 200
             N      R      +++  I +S  TR   S+I+A+ V+  Y          ++   V
Sbjct: 182 RHNATFFSSR------ELNICILASEPTRALSSLIIALLVVFYY----------MISERV 225

Query: 201 IGFRPIYIVLLTNWSVVAARLFAGRQRGFGRLSRRGSDETLASSGD---WGAQLARTLEI 257
           +  RP+YI+LLT+ ++V ARL+ G+      L      E + ++GD   WG  + + +E 
Sbjct: 226 LASRPLYILLLTDVTLVLARLYGGK----ASLLEETEGEKVKATGDGHNWGDAV-KLMER 280

Query: 258 GLLLQSVLDAVFMDCAVYAIVLVCGLSLL 286
           GL+    +  VF+DC++Y +V+VCG SL+
Sbjct: 281 GLVTYQAIRGVFIDCSIYLVVVVCGTSLM 309