Miyakogusa Predicted Gene
- Lj0g3v0300669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0300669.1 Non Chatacterized Hit- tr|I3SC00|I3SC00_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.93,0,RNase_PH,Exoribonuclease, phosphorolytic domain 1;
Ribosomal protein S5 domain 2-like,Ribosomal prot,CUFF.20212.1
(194 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g08170.1 301 3e-82
Glyma11g20420.1 300 4e-82
Glyma11g20420.2 273 8e-74
Glyma17g19880.1 86 2e-17
Glyma15g15550.1 77 8e-15
Glyma17g11020.2 74 9e-14
Glyma17g11020.1 74 9e-14
Glyma17g18550.1 72 4e-13
Glyma09g39680.1 71 8e-13
Glyma09g39680.2 71 9e-13
Glyma09g39680.3 67 1e-11
Glyma18g46510.1 66 3e-11
Glyma14g12880.1 51 8e-07
Glyma19g44210.1 48 5e-06
>Glyma12g08170.1
Length = 254
Score = 301 bits (771), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/194 (75%), Positives = 156/194 (80%)
Query: 1 MAGKAGXXXXXXXXXXXXDKKKTSLIKEDWVRPDGRGFHQCRPAFFRTXXXXXXXXXXXX 60
MAGK G DKKK SL ED RPDGR FHQCRPAFFRT
Sbjct: 1 MAGKGGSTPATYSPSPTTDKKKPSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSAYA 60
Query: 61 EFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFATPVRGQGSDHKDYSAMLDKAL 120
E GNTKVIVSVFGPRESKKAM+YSD+GRLNCNVS+TTFATP+RGQGSDHK+YS+ML KAL
Sbjct: 61 EVGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYSSMLHKAL 120
Query: 121 GGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSK 180
GAIILE+FPKTTVDVFALVLES GSDLPVVISCASLALADAGIMMYDLVASVSVSC +K
Sbjct: 121 EGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCFNK 180
Query: 181 NLVIDPISEEENCQ 194
NLVIDP+ EEEN Q
Sbjct: 181 NLVIDPVLEEENGQ 194
>Glyma11g20420.1
Length = 255
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
Query: 1 MAGKAGXXXXXXXXXXXXD-KKKTSLIKEDWVRPDGRGFHQCRPAFFRTXXXXXXXXXXX 59
MAGK G + KKK + KEDWVRPDGRGFHQCRPAFFRT
Sbjct: 1 MAGKGGATPATYSPSPTTNRKKKPPIFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAY 60
Query: 60 XEFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFATPVRGQGSDHKDYSAMLDKA 119
EFGNTKVIVSVFGPRESKKAM+YSD+GRLNCNVS+TTFATP+RGQGSDHK+Y AML KA
Sbjct: 61 AEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYCAMLHKA 120
Query: 120 LGGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLS 179
L GAIILE+FPKTTVDVFALVLES GSDLPVVISCASLALADAGIMMYD+VASVSVSC +
Sbjct: 121 LEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDIVASVSVSCFN 180
Query: 180 KNLVIDPISEEE 191
KNLVIDPI EEE
Sbjct: 181 KNLVIDPILEEE 192
>Glyma11g20420.2
Length = 185
Score = 273 bits (698), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/176 (76%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Query: 1 MAGKAGXXXXXXXXXXXXD-KKKTSLIKEDWVRPDGRGFHQCRPAFFRTXXXXXXXXXXX 59
MAGK G + KKK + KEDWVRPDGRGFHQCRPAFFRT
Sbjct: 1 MAGKGGATPATYSPSPTTNRKKKPPIFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAY 60
Query: 60 XEFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTTFATPVRGQGSDHKDYSAMLDKA 119
EFGNTKVIVSVFGPRESKKAM+YSD+GRLNCNVS+TTFATP+RGQGSDHK+Y AML KA
Sbjct: 61 AEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYCAMLHKA 120
Query: 120 LGGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSV 175
L GAIILE+FPKTTVDVFALVLES GSDLPVVISCASLALADAGIMMYD+VASVSV
Sbjct: 121 LEGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDIVASVSV 176
>Glyma17g19880.1
Length = 143
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 45/53 (84%)
Query: 142 ESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPISEEENCQ 194
E DLP+VISCASLALADAGIMMYDLVASVSVSC + NLVIDP+ EEEN Q
Sbjct: 35 ECVAGDLPIVISCASLALADAGIMMYDLVASVSVSCFNNNLVIDPVLEEENGQ 87
>Glyma15g15550.1
Length = 145
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 58/108 (53%), Gaps = 17/108 (15%)
Query: 38 FHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNCNVSYTT 97
F + R F+ E GNTKVIVSVFGPRESK Y+ C+
Sbjct: 54 FVEFRGIVFKIDAVNATSGSAYAEVGNTKVIVSVFGPRESKYMKGYT------CSFFLLY 107
Query: 98 FATPVRGQGSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGG 145
HK+YS+ML KAL AIILE+FPKTT+D+ ALVLES G
Sbjct: 108 -----------HKEYSSMLHKALEEAIILETFPKTTLDIHALVLESIG 144
>Glyma17g11020.2
Length = 241
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 29 DWVRPDGRGFHQCRPAFFRTXXXXXXXXXXXX-----EFGNTKVIVSVFGPRE-SKKAML 82
++V P+G RP R E GNTKVI +V+GPRE +
Sbjct: 2 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQQ 61
Query: 83 YSDVGRLNCNVSYTTFAT--PVRGQGSDHK--DYSAMLDKALGGAIILESFPKTTVDVFA 138
S + C S F+T +R D + + S ++ + + I+ P++ +D++
Sbjct: 62 ISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYV 121
Query: 139 LVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVID 185
VL++ G I+ A+LALADAGI M DLV S S L+ ++D
Sbjct: 122 QVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLD 168
>Glyma17g11020.1
Length = 241
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 29 DWVRPDGRGFHQCRPAFFRTXXXXXXXXXXXX-----EFGNTKVIVSVFGPRE-SKKAML 82
++V P+G RP R E GNTKVI +V+GPRE +
Sbjct: 2 EYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQQ 61
Query: 83 YSDVGRLNCNVSYTTFAT--PVRGQGSDHK--DYSAMLDKALGGAIILESFPKTTVDVFA 138
S + C S F+T +R D + + S ++ + + I+ P++ +D++
Sbjct: 62 ISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYV 121
Query: 139 LVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVID 185
VL++ G I+ A+LALADAGI M DLV S S L+ ++D
Sbjct: 122 QVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLD 168
>Glyma17g18550.1
Length = 196
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNC 91
RPDGR +Q RP + G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRTPNQLRPLAYSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPE------ 58
Query: 92 NVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPV 150
S P GQ G K+Y +L + L I +P TT V V+ G+ LP
Sbjct: 59 KASIEVIWKPKTGQIGKMEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPC 118
Query: 151 VISCASLALADAGIMMYDLVASVSVSCL-SKNLVIDPISEEE 191
I+ A AL DAGI + L ++ S S +++DP +EE
Sbjct: 119 AINAACAALVDAGIPLKHLAVAICCSVTDSGCIILDPTKDEE 160
>Glyma09g39680.1
Length = 246
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNC 91
RPDGR +Q RP G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPE------ 58
Query: 92 NVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPV 150
S P GQ G K+Y +L + L I +P TT V V+ G+ LP
Sbjct: 59 KASIEVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPC 118
Query: 151 VISCASLALADAGIMMYDLVASVSVSCL-SKNLVIDPISEEE 191
I+ A AL DAGI + L ++ S S +++DP EEE
Sbjct: 119 AINAACTALVDAGIPLKHLAVAICCSVTDSGCIILDPTKEEE 160
>Glyma09g39680.2
Length = 243
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNC 91
RPDGR +Q RP G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPE------ 58
Query: 92 NVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPV 150
S P GQ G K+Y +L + L I +P TT V V+ G+ LP
Sbjct: 59 KASIEVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPC 118
Query: 151 VISCASLALADAGIMMYDLVASVSVSCL-SKNLVIDPISEEE 191
I+ A AL DAGI + L ++ S S +++DP EEE
Sbjct: 119 AINAACTALVDAGIPLKHLAVAICCSVTDSGCIILDPTKEEE 160
>Glyma09g39680.3
Length = 235
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNC 91
RPDGR +Q RP G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPE------ 58
Query: 92 NVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPV 150
S P GQ G K+Y +L + L I +P TT V V+ G+ LP
Sbjct: 59 KASIEVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPC 118
Query: 151 VISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPISEEE 191
I+ A AL DAGI + L S C +++DP EEE
Sbjct: 119 AINAACTALVDAGIPLKHLADS---GC----IILDPTKEEE 152
>Glyma18g46510.1
Length = 235
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGNTKVIVSVFGPRESKKAMLYSDVGRLNC 91
RPDGR +Q RP G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPE------ 58
Query: 92 NVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPV 150
S P GQ G K+Y +L + L I +P TT V V+ G+ LP
Sbjct: 59 KASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPC 118
Query: 151 VISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPISEEEN 192
I+ A AL DAGI + L S C +++DP +EE
Sbjct: 119 AINAACAALVDAGIPLKHLADS---GC----IILDPTKDEEE 153
>Glyma14g12880.1
Length = 202
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 32 RPDGRGFHQCRPAFFRTXXXXXXXXXXXXEFGN--TKVIVSVFGPRESKKAMLYSDVGRL 89
RPD + +Q RP + TKV+ +V+GP+ K
Sbjct: 5 RPDSQTPNQLRPLACSCSCSILHRSHGSASWAQRETKVLAAVYGPKAGTKKNENPK---- 60
Query: 90 NCNVSYTTFATPVRGQ-GSDHKDYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDL 148
S P GQ G K+Y +L + L I +P TT L++ G L
Sbjct: 61 --KASIKVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTT----TLIVHDDGVLL 114
Query: 149 PVVISCASLALADAGIMMYDLVASVSVSCL-SKNLVIDPISEEE 191
P I+ A +AL DA I + LV ++ S S +++DP ++E
Sbjct: 115 PCAINAACVALVDARIPLKHLVVAICCSITDSGCIILDPTKDQE 158
>Glyma19g44210.1
Length = 168
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 111 DYSAMLDKALGGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLV 170
+ S ++ + + I+ P++ +D++ VL++ G I+ A+LALADAGI M DLV
Sbjct: 21 EISLVIRQTMEACILTHLLPRSQIDIYVQVLQADGGTRSACINAATLALADAGIPMRDLV 80
Query: 171 ASVSVSCLSKNLVID 185
S S L+ ++D
Sbjct: 81 TSCSAGYLNSTPLLD 95