Miyakogusa Predicted Gene

Lj0g3v0300389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300389.1 Non Chatacterized Hit- tr|I1JEW7|I1JEW7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,67.69,6e-18,seg,NULL,CUFF.20182.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g01290.1                                                       134   2e-32
Glyma07g29400.1                                                       131   2e-31
Glyma07g29410.1                                                       129   6e-31
Glyma07g29430.1                                                       100   3e-22
Glyma02g15230.1                                                        90   6e-19
Glyma07g33210.1                                                        63   9e-11
Glyma04g03900.1                                                        47   4e-06
Glyma06g04000.1                                                        47   4e-06

>Glyma20g01290.1 
          Length = 176

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/88 (71%), Positives = 74/88 (84%), Gaps = 3/88 (3%)

Query: 1  MAVKFTQAL-IMLVITVSMFAVSMANKDWSSGFNYTDWWSRFGNHHHNKTXXXXXPKQIL 59
          M +KFT  + I++VI+ SMF+VSMANKDWS GFNYTDWWSRFGNH  NKT     P+QIL
Sbjct: 1  MGLKFTHGVVILIVISASMFSVSMANKDWSFGFNYTDWWSRFGNHPQNKT--QQQPRQIL 58

Query: 60 VGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          VGGSEHWH+G+NY+DWA K+APFYLNDT
Sbjct: 59 VGGSEHWHYGFNYTDWAFKTAPFYLNDT 86


>Glyma07g29400.1 
          Length = 176

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 73/88 (82%), Gaps = 3/88 (3%)

Query: 1  MAVKFTQA-LIMLVITVSMFAVSMANKDWSSGFNYTDWWSRFGNHHHNKTXXXXXPKQIL 59
          MA+K     +I+++I+ SMF+VSMANKDWS GFNYTDWWSRFGNH  NKT     PKQI+
Sbjct: 1  MALKLGHGVMILVIISASMFSVSMANKDWSFGFNYTDWWSRFGNHPQNKT--QQQPKQIV 58

Query: 60 VGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          VGGSEHWH+G+NY+DWA KSAPFYLNDT
Sbjct: 59 VGGSEHWHYGFNYTDWAFKSAPFYLNDT 86


>Glyma07g29410.1 
          Length = 176

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 3/88 (3%)

Query: 1  MAVKFTQA-LIMLVITVSMFAVSMANKDWSSGFNYTDWWSRFGNHHHNKTXXXXXPKQIL 59
          M  KF    +I+ VI+ SMF++SMANKDWS GFNYTDWWSRFGNH  NKT     P+QIL
Sbjct: 1  MGAKFGHGVMILFVISASMFSMSMANKDWSFGFNYTDWWSRFGNHAQNKT--QQPPRQIL 58

Query: 60 VGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          VGGSEHWH+G+NY+DWA K+APFYLNDT
Sbjct: 59 VGGSEHWHYGFNYTDWAFKNAPFYLNDT 86


>Glyma07g29430.1 
          Length = 160

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 19/88 (21%)

Query: 1  MAVKFTQA-LIMLVITVSMFAVSMANKDWSSGFNYTDWWSRFGNHHHNKTXXXXXPKQIL 59
          M VKF    +I++VI+ SMF+VSMAN DWS GFNYTDWW                  QIL
Sbjct: 1  MGVKFRHVVMILVVISASMFSVSMANTDWSFGFNYTDWW------------------QIL 42

Query: 60 VGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          VGGSEHWH+G+NY+DWA  +APFYLNDT
Sbjct: 43 VGGSEHWHYGFNYTDWAFNNAPFYLNDT 70


>Glyma02g15230.1 
          Length = 150

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 4/65 (6%)

Query: 25 NKDWSSGFN--YTDWWSRFGNHHHNKTXXXXXPKQILVGGSEHWHFGYNYSDWAIKSAPF 82
          NKDWS G N  Y+DWWSRF N H NKT     P++I+VGGSE WHFG+NY+DWA K+ PF
Sbjct: 1  NKDWSFGSNSNYSDWWSRFRNRHQNKTEQE--PRKIIVGGSEGWHFGFNYTDWAFKNGPF 58

Query: 83 YLNDT 87
          YLNDT
Sbjct: 59 YLNDT 63


>Glyma07g33210.1 
          Length = 139

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 55 PKQILVGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          P++I+VGGSEHWHFGYNY++WAI + PFY NDT
Sbjct: 17 PREIIVGGSEHWHFGYNYTNWAINNGPFYFNDT 49


>Glyma04g03900.1 
          Length = 145

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 55 PKQILVGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          P+ ILVG S+ W  G NY+ WAI+++PF++NDT
Sbjct: 26 PRTILVGDSQGWQAGTNYTQWAIQNSPFHINDT 58


>Glyma06g04000.1 
          Length = 143

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 26/33 (78%)

Query: 55 PKQILVGGSEHWHFGYNYSDWAIKSAPFYLNDT 87
          P+ ILVG S+ W  G NY+ WAI+++PF++NDT
Sbjct: 26 PRTILVGDSQGWQAGTNYTQWAIQNSPFHINDT 58