Miyakogusa Predicted Gene

Lj0g3v0300109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300109.1 Non Chatacterized Hit- tr|I3T814|I3T814_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,58.49,0.0000000001,
,gene.Ljchr0_pseudomol_20120828.path1.gene30829.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g09250.1                                                        64   3e-11
Glyma03g03720.1                                                        50   4e-07
Glyma16g17690.1                                                        50   7e-07
Glyma18g28370.1                                                        50   7e-07

>Glyma16g09250.1 
          Length = 1460

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 41/63 (65%)

Query: 3  AAPASVVNVLESLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEED 62
          A P S +  L S +   ++KLD +N+  W QQ+E  +R+H+LH F V PEIP ++ +E D
Sbjct: 15 ATPNSTITPLSSFNYKISVKLDATNYLVWLQQIEPVLRAHRLHRFCVTPEIPPQYASEHD 74

Query: 63 RVA 65
          R+A
Sbjct: 75 RLA 77


>Glyma03g03720.1 
          Length = 1393

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 33/53 (62%)

Query: 11  VLESLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEEDR 63
           + E +    +IKLDD NF  W Q+V G +  H+LH  LV+P IP ++ ++ DR
Sbjct: 473 IKEDIDVQLSIKLDDKNFLLWNQRVGGIVAMHKLHHLLVNPIIPSKYNSDLDR 525


>Glyma16g17690.1 
          Length = 3826

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/41 (53%), Positives = 28/41 (68%)

Query: 22 KLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEED 62
          KLD SNF  W QQV+   +SH L  F+ +P IP RFL++ED
Sbjct: 21 KLDHSNFLMWWQQVQPVFKSHHLQWFVENPIIPPRFLSDED 61


>Glyma18g28370.1 
          Length = 326

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%)

Query: 2  AAAPASVVNVLESLSRTATIKLDDSNFYSWRQQVEGAIRSHQLHDFLVDPEIPQRFLTEE 61
          AA P     V  +L+ T T KLD +N+  WR QV+  IR + L  F+ +  IPQRF T E
Sbjct: 19 AALPVHPAPVNTNLNHTITEKLDLTNYLFWRTQVKPVIRGYNLLHFIHEVLIPQRFATVE 78

Query: 62 DRVAA 66
          D  A 
Sbjct: 79 DANAG 83