Miyakogusa Predicted Gene

Lj0g3v0299889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299889.1 tr|G7ID28|G7ID28_MEDTR Multidrug resistance
protein ABC transporter family OS=Medicago truncatula
GN,79.55,0.000000000001, ,CUFF.20242.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g30490.1                                                        76   7e-15
Glyma10g37160.1                                                        76   8e-15
Glyma10g37150.1                                                        73   8e-14
Glyma16g28910.1                                                        66   8e-12
Glyma16g28900.1                                                        65   2e-11
Glyma16g28890.1                                                        58   3e-09

>Glyma20g30490.1 
          Length = 1455

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  GKLVEYDEPMNL+KRE  L GKLVKEYWSHFQSAESH
Sbjct: 1412 KVLAISDGKLVEYDEPMNLIKREGSLFGKLVKEYWSHFQSAESH 1455


>Glyma10g37160.1 
          Length = 1460

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  GKLVEYDEPMNL+KRE  L GKLVKEYWSHFQSAESH
Sbjct: 1417 KVLAISDGKLVEYDEPMNLIKREGSLFGKLVKEYWSHFQSAESH 1460


>Glyma10g37150.1 
          Length = 1461

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/44 (75%), Positives = 36/44 (81%)

Query: 20   KCLIVFSGKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            K L +  G+LVEYDEPMNLMKRE  L G+LVKEYWSH QSAESH
Sbjct: 1418 KVLAIREGELVEYDEPMNLMKREGSLFGQLVKEYWSHLQSAESH 1461


>Glyma16g28910.1 
          Length = 1445

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKLVEYDEP +LMK+E  L  +LVKEYWSHFQSAESH
Sbjct: 1400 CTMVLSISDGKLVEYDEPTSLMKKEGSLFKQLVKEYWSHFQSAESH 1445


>Glyma16g28900.1 
          Length = 1448

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   GKLVEYD+PM LMK+E  L  +LV EYWSHFQSAESH
Sbjct: 1403 CTMVLSIRDGKLVEYDDPMCLMKKEGSLFNQLVNEYWSHFQSAESH 1448


>Glyma16g28890.1 
          Length = 2359

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 3/46 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAESH 63
            C +V S   G L EYDEPM+LM++E  L  +LV EY+SHFQ AESH
Sbjct: 2314 CTMVLSISEGNLAEYDEPMSLMRKEGSLFRQLVNEYYSHFQCAESH 2359