Miyakogusa Predicted Gene

Lj0g3v0299789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299789.1 Non Chatacterized Hit- tr|A5AEG8|A5AEG8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.16,3e-17,PRICHEXTENSN,NULL; seg,NULL,CUFF.20140.1
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g28090.1                                                        64   2e-10
Glyma14g28050.1                                                        53   3e-07

>Glyma14g28090.1 
          Length = 244

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 3/58 (5%)

Query: 155 VIHFDEHKTVKETILPGPFGQKTVVITVEDDVHVDEEIRKNEEVVGHGHGLHDAKTSS 212
           VIHFDEHKTVKETI+PGPFG+ TVV+TVEDDVH+DEEI+K  E    GHGLH AK+SS
Sbjct: 155 VIHFDEHKTVKETIVPGPFGRNTVVVTVEDDVHIDEEIKKKNE--KGGHGLH-AKSSS 209


>Glyma14g28050.1 
          Length = 232

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 42/48 (87%), Gaps = 2/48 (4%)

Query: 155 VIHFDEHKTVKETILPGPFGQKTVVITVEDDVHVDEEIRKNEEVVGHG 202
           V+HFDEH+TVKETI+PGPFG+ TVV+TVEDDVH+DEEI+   E VGH 
Sbjct: 155 VLHFDEHQTVKETIVPGPFGRNTVVVTVEDDVHIDEEIKT--EKVGHA 200