Miyakogusa Predicted Gene

Lj0g3v0299499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299499.1 Non Chatacterized Hit- tr|I1N1F6|I1N1F6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,60.56,2e-17,
,CUFF.20115.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g14270.1                                                       110   3e-25
Glyma18g18870.1                                                        93   9e-20
Glyma08g39820.1                                                        89   2e-18
Glyma05g31060.1                                                        67   4e-12

>Glyma08g14270.1 
          Length = 356

 Score =  110 bits (276), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 70/97 (72%), Gaps = 3/97 (3%)

Query: 42  LASPRLAFPSYAGFWGLH---FFAMICCVAIGKLLMMYLEWSAIWNMSIVISVLDGVYGI 98
           +A P +A   Y  F  L    FFA+IC +   KLL +YLEWSAIWNMS VISV+DG+YGI
Sbjct: 181 IAFPWMAGNCYVLFRDLGYYIFFAVICFLVFVKLLKVYLEWSAIWNMSFVISVVDGIYGI 240

Query: 99  GAFRVSYFFSRGNQKTGLLLMLVFFIFGFCLRLISLS 135
           GA RVSY+ SRGNQK GLL+MLVFF  G CLRL  +S
Sbjct: 241 GALRVSYYLSRGNQKRGLLVMLVFFALGLCLRLSCVS 277


>Glyma18g18870.1 
          Length = 298

 Score = 92.8 bits (229), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 55/71 (77%)

Query: 61  FAMICCVAIGKLLMMYLEWSAIWNMSIVISVLDGVYGIGAFRVSYFFSRGNQKTGLLLML 120
           FA+IC  A  K+L MYLEWSA+WNMS+V+SVL+G+YG+ A  VS +FSRG  + GL LML
Sbjct: 168 FAVICSAAFAKVLRMYLEWSAMWNMSLVMSVLEGIYGVDALAVSAYFSRGCHRRGLFLML 227

Query: 121 VFFIFGFCLRL 131
           +FF +G  LRL
Sbjct: 228 IFFAWGHLLRL 238


>Glyma08g39820.1 
          Length = 227

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 52/67 (77%)

Query: 65  CCVAIGKLLMMYLEWSAIWNMSIVISVLDGVYGIGAFRVSYFFSRGNQKTGLLLMLVFFI 124
           C VA  K+L MYLEWSA+WNMS+VISVL+G+YG+ AF  S +FSRG  + GL LM++FF 
Sbjct: 118 CSVAFAKVLRMYLEWSAMWNMSLVISVLEGIYGVDAFSSSTYFSRGCHRRGLFLMMIFFA 177

Query: 125 FGFCLRL 131
           +G  LRL
Sbjct: 178 WGHLLRL 184


>Glyma05g31060.1 
          Length = 244

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 36/47 (76%)

Query: 91  VLDGVYGIGAFRVSYFFSRGNQKTGLLLMLVFFIFGFCLRLISLSKE 137
           V+DG+Y IGA RVSY+ S GNQK GLLLMLVFF  G CLRL  +S E
Sbjct: 146 VVDGIYAIGALRVSYYLSTGNQKRGLLLMLVFFALGLCLRLSCVSLE 192