Miyakogusa Predicted Gene

Lj0g3v0299249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299249.1 Non Chatacterized Hit- tr|D7LZ23|D7LZ23_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,46.55,5e-16,PRONE,Plant specific Rop nucleotide exchanger,
PRONE,NODE_83427_length_1225_cov_15.594286.path2.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06930.1                                                       174   2e-44
Glyma02g41980.1                                                       168   1e-42
Glyma11g34690.1                                                       160   4e-40
Glyma18g03610.1                                                       150   5e-37
Glyma18g41330.1                                                        77   6e-15
Glyma03g16610.1                                                        67   9e-12
Glyma03g16610.2                                                        65   2e-11
Glyma07g16790.1                                                        63   9e-11
Glyma03g16550.1                                                        54   4e-08
Glyma01g26010.1                                                        47   5e-06

>Glyma14g06930.1 
          Length = 619

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/151 (65%), Positives = 109/151 (72%), Gaps = 25/151 (16%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKAL---- 56
           MAFNIVARIDDLLYVD LTKHSDRFPLVP              M VSVSGTPHKA+    
Sbjct: 480 MAFNIVARIDDLLYVDGLTKHSDRFPLVP--------------MTVSVSGTPHKAIGGTP 525

Query: 57  ---SPVP-LISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETKATKMFSN 112
              SP P LISPARG  ER+PFL  N+NNI KPQ RGFGVRR LSNYLG E+K TK+ SN
Sbjct: 526 KSFSPAPPLISPARG--ERSPFLRNNHNNI-KPQCRGFGVRRVLSNYLGAESKETKIVSN 582

Query: 113 ATEVYGTNPNCNKAEQPECQKESHDMRSKTK 143
           +T + G+NP+ NKAEQPE QK+SH M  KTK
Sbjct: 583 STVMNGSNPSSNKAEQPERQKKSHAMNGKTK 613


>Glyma02g41980.1 
          Length = 557

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/152 (65%), Positives = 109/152 (71%), Gaps = 25/152 (16%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKAL---- 56
           MAFNIVARI+DLLYVDDLTKHSDRFPLVP              M VSVSGTPHKA+    
Sbjct: 422 MAFNIVARIEDLLYVDDLTKHSDRFPLVP--------------MTVSVSGTPHKAIGTPR 467

Query: 57  --SPVP-LISPARGDRERTPFLNINNNNI--IKPQRRGFGVRRALSNYLGGETKATKMFS 111
             SP P LISPARG  ER+PFL  N+NN   IKPQRRGFGVRR LSNYLG E+K TK+ S
Sbjct: 468 SFSPAPPLISPARG--ERSPFLGNNHNNNNNIKPQRRGFGVRRVLSNYLGAESKETKILS 525

Query: 112 NATEVYGTNPNCNKAEQPECQKESHDMRSKTK 143
           N+T V G+N + NK EQPE QK+SH M  KTK
Sbjct: 526 NSTVVNGSNTSNNKEEQPERQKKSHAMHGKTK 557


>Glyma11g34690.1 
          Length = 498

 Score =  160 bits (405), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/139 (68%), Positives = 107/139 (76%), Gaps = 15/139 (10%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPT-VNVVSQQK-LSRS-MAVSVSGT-PHKAL 56
           MAFNIVARIDDLLYVDDLTKHS+RF LVP T VN+VSQQK ++R  ++VSVSGT PHKA 
Sbjct: 346 MAFNIVARIDDLLYVDDLTKHSERFALVPTTTVNMVSQQKKITRPPLSVSVSGTTPHKAS 405

Query: 57  --------SPVPLISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETKATK 108
                   + VPLISPARG  ERTPFL+ N NN IKP RRGFGVRR LSNYLG ETK TK
Sbjct: 406 IGTPSFSSAAVPLISPARG--ERTPFLH-NINNSIKPHRRGFGVRRVLSNYLGVETKTTK 462

Query: 109 MFSNATEVYGTNPNCNKAE 127
           + SN+TEV  +NP+  K E
Sbjct: 463 ICSNSTEVNCSNPSSKKTE 481


>Glyma18g03610.1 
          Length = 483

 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 99/134 (73%), Gaps = 10/134 (7%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPT-VNVVSQQK-LSRSMAVSVSGT-PHKALS 57
           MAFNIVARIDDLLYVDDLTKHS+RF LVP T VNVVSQQK ++R ++VSVSGT PHKA  
Sbjct: 350 MAFNIVARIDDLLYVDDLTKHSERFALVPTTTVNVVSQQKKVTRPLSVSVSGTTPHKASV 409

Query: 58  PVPLISPARGDRERTPFLNINNNNII---KPQRRGFGVRRALSNYLGGETKATKMFSNAT 114
             P  SPA     RTPFL+  N N     KP RRGFGVRR LSNYLG ETK TK+ SN+T
Sbjct: 410 GTPSFSPA----ARTPFLHNININNNNNIKPHRRGFGVRRVLSNYLGVETKTTKICSNST 465

Query: 115 EVYGTNPNCNKAEQ 128
           EV  +NP+  K EQ
Sbjct: 466 EVNCSNPSSKKTEQ 479


>Glyma18g41330.1 
          Length = 590

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKALSPVP 60
           +AFN+VARIDD+LYVDDLTK+SD+   +   V VV+ + +S   +V V GTP+K+    P
Sbjct: 461 LAFNLVARIDDVLYVDDLTKNSDKISSL-SKVGVVTHKSISVPHSVPVPGTPYKSAFGTP 519

Query: 61  LISPARGDRE-----RTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETKA 106
            +SPA G        ++P +N +N     PQ RG GV+++L+++L  + K 
Sbjct: 520 TLSPAHGISSPAKGGKSPLINYSN----LPQ-RGSGVKKSLTDFLSIDPKG 565


>Glyma03g16610.1 
          Length = 668

 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 13/108 (12%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNV---VSQQKLSRSMAVSVSGTPHKALS 57
           +A NIVARIDD+LYVDDLTKHSD   +   T++V   +S Q        S  GTP+   S
Sbjct: 527 LASNIVARIDDVLYVDDLTKHSDGV-IAHKTISVPHSMSGQSTPPPSYKSSLGTPN--FS 583

Query: 58  PVPLISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETK 105
           P   +SPA+G   ++PF  IN++N+  PQ RG GV + L+++ G E K
Sbjct: 584 PARCVSPAKGS--KSPF--INSSNL--PQ-RGVGVSKVLTHFGGIERK 624


>Glyma03g16610.2 
          Length = 488

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 25/114 (21%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTP---HKA-- 55
           +A NIVARIDD+LYVDDLTKHSD          V++ + +S   ++S   TP   +K+  
Sbjct: 347 LASNIVARIDDVLYVDDLTKHSD---------GVIAHKTISVPHSMSGQSTPPPSYKSSL 397

Query: 56  ----LSPVPLISPARGDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLGGETK 105
                SP   +SPA+G   ++PF  IN++N+  PQ RG GV + L+++ G E K
Sbjct: 398 GTPNFSPARCVSPAKG--SKSPF--INSSNL--PQ-RGVGVSKVLTHFGGIERK 444


>Glyma07g16790.1 
          Length = 628

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKALSPVP 60
           +AFN+VARIDD+LYVDDLTK+ D+   +   V VV+ + +S   +V + GTP+K+    P
Sbjct: 488 LAFNMVARIDDVLYVDDLTKNLDKISSL-SKVGVVTHKSISVPHSVPIPGTPYKSAFGTP 546

Query: 61  LISPARG 67
            +SPA G
Sbjct: 547 TLSPAHG 553


>Glyma03g16550.1 
          Length = 100

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 11/102 (10%)

Query: 4   NIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAVSVSGTPHKALSPVPLIS 63
           NIVA ID +LYVDDLTKH D    + P V+V+S + +  S ++    T  K     P  S
Sbjct: 5   NIVAHIDVMLYVDDLTKHFDPISSL-PKVSVISHKSIFVSYSMFAQITHLKQSFCTPSFS 63

Query: 64  PAR----GDRERTPFLNINNNNIIKPQRRGFGVRRALSNYLG 101
           P+R     +  ++PF+N NN  +     RG GV R L+ Y G
Sbjct: 64  PSRCISPTNEAKSPFINRNNLPL-----RGVGVNRVLT-YFG 99


>Glyma01g26010.1 
          Length = 438

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 9/89 (10%)

Query: 1   MAFNIVARIDDLLYVDDLTKHSDRFPLVPPTVNVVSQQKLSRSMAV-SVSGTPHKALSPV 59
           ++ NIVARIDD+LYVD+LTKHS+      P V V++ + +S   ++   S  PHK+    
Sbjct: 352 LSSNIVARIDDVLYVDELTKHSNPISSF-PKVGVIAHKSISVPHSLPGQSIPPHKSSFGT 410

Query: 60  PLISPARGDRERTPFLNINNNNIIKPQRR 88
           P  SPA+        +++  + II  Q+R
Sbjct: 411 PSFSPAQC-------VSLKGSKIINHQQR 432