Miyakogusa Predicted Gene

Lj0g3v0299199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299199.1 Non Chatacterized Hit- tr|I1JIV7|I1JIV7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7260
PE=,59.79,2e-18,F-box,F-box domain,
cyclin-like,NODE_47195_length_1382_cov_32.022430.path1.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04080.1                                                       103   3e-23
Glyma07g36360.1                                                       102   7e-23
Glyma02g44660.1                                                        97   5e-21
Glyma02g44660.2                                                        96   8e-21
Glyma20g08260.1                                                        92   2e-19
Glyma19g30990.1                                                        47   6e-06

>Glyma14g04080.1 
          Length = 397

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 14/97 (14%)

Query: 1   MRLISLLFYKELLCVKS----FRNCLWLSFLYQIPTKMSLAKKTLTSKFENVEDTREM-- 54
           +RLIS LFYK+L  VKS    FRN LWL FL QIPT+MSL KK+  SK EN+ED+++M  
Sbjct: 31  LRLISPLFYKDL-SVKSISKLFRNRLWLGFLCQIPTRMSLMKKS--SKVENIEDSQDMSV 87

Query: 55  -----LVLECILERLPQSSLCQMASVCHSLRERCVST 86
                LVLECILE+LP +SLCQMA VC SLRE CVS 
Sbjct: 88  LDLPELVLECILEKLPPASLCQMAGVCRSLRESCVSD 124


>Glyma07g36360.1 
          Length = 399

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 10/96 (10%)

Query: 1   MRLISLLFYKEL---LCVKSFRNCLWLSFLYQIPTKMSLAKKTLTSKFENVEDTREM--- 54
           M L  LLF +EL      K FRNC W+ FL QIP  MSL +K+LTS+ ENVED+ +M   
Sbjct: 30  MWLFPLLFSQELSVRTISKLFRNCFWIGFLCQIPIGMSLVRKSLTSRVENVEDSHDMSVL 89

Query: 55  ----LVLECILERLPQSSLCQMASVCHSLRERCVST 86
               L L+CILERLP S+LC+MA+VC SLRERCVS 
Sbjct: 90  DLPELALDCILERLPPSALCRMAAVCRSLRERCVSD 125


>Glyma02g44660.1 
          Length = 397

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 14/97 (14%)

Query: 1   MRLISLLFYKELLCVKS----FRNCLWLSFLYQIPTKMSLAKKTLTSKFENVEDTREM-- 54
           +RLIS LFYK+L  VKS    FR  LWL FL QIPT+MSL  K+  SK E +ED+++M  
Sbjct: 31  VRLISPLFYKDL-SVKSISKLFRKRLWLGFLGQIPTRMSLVNKS--SKVEIIEDSQDMSV 87

Query: 55  -----LVLECILERLPQSSLCQMASVCHSLRERCVST 86
                LVLECILE+LP  SLCQMA VC SLRE CVS 
Sbjct: 88  LDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSD 124


>Glyma02g44660.2 
          Length = 344

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 67/97 (69%), Gaps = 14/97 (14%)

Query: 1   MRLISLLFYKELLCVKS----FRNCLWLSFLYQIPTKMSLAKKTLTSKFENVEDTREM-- 54
           +RLIS LFYK+L  VKS    FR  LWL FL QIPT+MSL  K+  SK E +ED+++M  
Sbjct: 31  VRLISPLFYKDL-SVKSISKLFRKRLWLGFLGQIPTRMSLVNKS--SKVEIIEDSQDMSV 87

Query: 55  -----LVLECILERLPQSSLCQMASVCHSLRERCVST 86
                LVLECILE+LP  SLCQMA VC SLRE CVS 
Sbjct: 88  LDLPELVLECILEKLPPPSLCQMAGVCRSLRESCVSD 124


>Glyma20g08260.1 
          Length = 399

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 10/96 (10%)

Query: 1   MRLISLLFYKEL---LCVKSFRNCLWLSFLYQIPTKMSLAKKTLTSKFENVEDTREM--- 54
           M L  LLF +E       K FRN  W+ FL QIP  MSL +K+LTS+ ENVE++ +M   
Sbjct: 30  MWLFPLLFSQEFSMSTISKLFRNRFWIGFLCQIPIGMSLVRKSLTSRVENVEESLDMSVL 89

Query: 55  ----LVLECILERLPQSSLCQMASVCHSLRERCVST 86
               L L+CILERLP SSLC++A+VC +LRERCVS 
Sbjct: 90  DLPELALDCILERLPPSSLCRIAAVCRTLRERCVSD 125


>Glyma19g30990.1 
          Length = 399

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 8/69 (11%)

Query: 24  LSFLYQIPTKMSLAKKTLTSKFENVEDTREM-------LVLECILERLPQSSLCQMASVC 76
            SFL Q    MSL   +L SK EN E+  ++       L LECILE L  + LC++A+VC
Sbjct: 58  FSFL-QFSLDMSLKNNSLVSKGENEEEEVKVSLLDLPDLPLECILEHLSPAELCRVATVC 116

Query: 77  HSLRERCVS 85
            SLR+RC S
Sbjct: 117 TSLRDRCRS 125