Miyakogusa Predicted Gene

Lj0g3v0297949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0297949.1 Non Chatacterized Hit- tr|G7L2K9|G7L2K9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,33.48,6e-18,RNI-like,NULL; no description,NULL;
seg,NULL,CUFF.20000.1
         (433 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g40890.1                                                        50   4e-06

>Glyma08g40890.1 
          Length = 282

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 27/193 (13%)

Query: 2   LSMKDMLNTNILSKRWCNLCYLKRDLKFDVFHVLGSEEE-----LLEKGYIVDVFFYR-- 54
           L +KD + T++LS +W N+     +L  D  ++L   E      LL +  +  + F R  
Sbjct: 20  LKVKDAVTTSVLSSKWRNISCNPSNLILDEDNMLIKREHSLTYVLLHQSVVQRLEFKRDR 79

Query: 55  ---VVKDIFSDVSRNEYVKKVDQFIMNFKGTEIDSFLVEFSLRQENSNTIDQWINFSIAR 111
               V ++   +S  E V+K+D+  + F           F   +  S  +D+WI F++ +
Sbjct: 80  TLAFVSNVNMYLSHVEEVQKIDKLKVCFT----------FRHNEYGSTDLDRWIRFAVEK 129

Query: 112 GVRRIDLLLLGKFSREFVDGFDYDGCYKFPFGLFSNSDSPT-----VRDMHLRYCLVYQE 166
            V  IDL LL +     ++    DG Y FP  +  N +  +     ++ + L +C++   
Sbjct: 130 NVEEIDLCLLEENHHHQINASPNDGYYVFPCEVVGNYEGESGSKSFLKSLRLAHCVLAPH 189

Query: 167 T--NFGILPFTNL 177
              N G    T +
Sbjct: 190 MLHNLGFSTLTTM 202