Miyakogusa Predicted Gene

Lj0g3v0297619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0297619.1 tr|Q6V0J6|Q6V0J6_BRACM Reduced vernalization
response 1 OS=Brassica campestris PE=2
SV=1,59.34,4e-18,seg,NULL,gene.g23149.t1.1
         (274 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g21160.1                                                       362   e-100
Glyma20g01130.1                                                       357   5e-99
Glyma12g05250.1                                                       264   9e-71
Glyma12g05250.2                                                       259   2e-69
Glyma12g05250.3                                                       259   2e-69
Glyma11g13210.2                                                       259   3e-69
Glyma11g13210.1                                                       258   5e-69
Glyma12g05250.4                                                       162   5e-40

>Glyma07g21160.1 
          Length = 437

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/236 (76%), Positives = 192/236 (81%), Gaps = 4/236 (1%)

Query: 1   MYEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSN 60
           MYEGNSSFIVHIFN+STSEVNYQSA+R+ NEG  F NYHHIF EMED DS    D SP  
Sbjct: 83  MYEGNSSFIVHIFNLSTSEVNYQSAMRNHNEGSCFANYHHIFDEMEDVDSLGLSDLSPQY 142

Query: 61  LTPGSLQNKVFGGSVDQLTPGKNQSPARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
           LTPG+LQ+K F GSVDQLTPGK+ +PA QNLFNGGSKLNRVNWGD GS F  KDANSQGN
Sbjct: 143 LTPGALQSKGFAGSVDQLTPGKSHTPALQNLFNGGSKLNRVNWGDGGSAFSLKDANSQGN 202

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLRYPN-NEEGVSKTVKRKRKSEPKTVDGQXXXXXXXX 179
            STRDIGVQFNAVEFKRSTEELKLRY N NEE V+KT K+KRKSEP    G+        
Sbjct: 203 QSTRDIGVQFNAVEFKRSTEELKLRYSNSNEEAVNKTAKKKRKSEPY---GEEPSGENEE 259

Query: 180 XXXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
              MRYRFYESASARKRTVTAEERERAIN +K FEP NPFCRVVLRPSYLYRGCIM
Sbjct: 260 EAEMRYRFYESASARKRTVTAEERERAINASKTFEPTNPFCRVVLRPSYLYRGCIM 315


>Glyma20g01130.1 
          Length = 435

 Score =  357 bits (917), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 179/235 (76%), Positives = 192/235 (81%), Gaps = 4/235 (1%)

Query: 1   MYEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSN 60
           MYEGNSSFIVHIFN+STSEVNYQSA+R+RNEG    NYHHIF EMED DS +  D SP  
Sbjct: 83  MYEGNSSFIVHIFNLSTSEVNYQSAIRNRNEGSCLANYHHIFDEMEDVDSLDLSDLSPQY 142

Query: 61  LTPGSLQNKVFGGSVDQLTPGKNQSPARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
           LTPGSLQNK   GSVDQLTPGK+ +PA QNLFNGGSKLNR+NWGD GS F SK+ANSQGN
Sbjct: 143 LTPGSLQNKGCVGSVDQLTPGKSHTPALQNLFNGGSKLNRINWGDGGSAFSSKNANSQGN 202

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXXX 180
            STRDIGVQFNA EFKRSTEELKLRY +NEE V+KT K+KRKSEP    G+         
Sbjct: 203 QSTRDIGVQFNANEFKRSTEELKLRY-SNEETVNKTAKKKRKSEPY---GEEPSGENEEE 258

Query: 181 XXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
             MRYRFYESASARKRTVTAEERERAIN +K FEP NPFCRVVLRPSYLYRGCIM
Sbjct: 259 AEMRYRFYESASARKRTVTAEERERAINASKTFEPTNPFCRVVLRPSYLYRGCIM 313


>Glyma12g05250.1 
          Length = 441

 Score =  264 bits (674), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 177/235 (75%), Gaps = 3/235 (1%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQSA RS NEG  FTN   +F E+ED DS E  DSSPS+L
Sbjct: 85  YEGKSSFSVHIFNLATSEINYQSATRSSNEGLHFTNRLKLFEEIEDEDSIEISDSSPSHL 144

Query: 62  TPGSLQNKVFGGSVDQLTPGKNQSP-ARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
            P SLQN+   GSVD++ PGK+ +P A QNLFNG SKLN +NWG+ G+   S+ ANS  N
Sbjct: 145 APSSLQNQALTGSVDKMMPGKSYTPPALQNLFNG-SKLNSINWGEGGNAHSSRIANSLDN 203

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXXX 180
             TRDIG+QFNAVEFKRSTEELKLR  + EE + KT ++KRKS   + DGQ         
Sbjct: 204 RLTRDIGLQFNAVEFKRSTEELKLR-ASMEERMKKTTRKKRKSVCASADGQDPSAEHEEE 262

Query: 181 XXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
             MR RFYESASARKRTVTAEERERAIN AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 263 VEMRLRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIM 317


>Glyma12g05250.2 
          Length = 436

 Score =  259 bits (663), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 176/235 (74%), Gaps = 8/235 (3%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQSA RS NEG  FTN   +F E+ED DS E  DSSPS+L
Sbjct: 85  YEGKSSFSVHIFNLATSEINYQSATRSSNEGLHFTNRLKLFEEIEDEDSIEISDSSPSHL 144

Query: 62  TPGSLQNKVFGGSVDQLTPGKNQSP-ARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
            P SLQN+   GSVD++ PGK+ +P A QNLFNG SKLN +NWG+ G+   S+ ANS  N
Sbjct: 145 APSSLQNQALTGSVDKMMPGKSYTPPALQNLFNG-SKLNSINWGEGGNAHSSRIANSLDN 203

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXXX 180
             TRDIG+QFNAVEFKRSTEELKLR  + EE + KT ++KRKS     DGQ         
Sbjct: 204 RLTRDIGLQFNAVEFKRSTEELKLR-ASMEERMKKTTRKKRKS-----DGQDPSAEHEEE 257

Query: 181 XXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
             MR RFYESASARKRTVTAEERERAIN AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 258 VEMRLRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIM 312


>Glyma12g05250.3 
          Length = 315

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 176/235 (74%), Gaps = 8/235 (3%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQSA RS NEG  FTN   +F E+ED DS E  DSSPS+L
Sbjct: 85  YEGKSSFSVHIFNLATSEINYQSATRSSNEGLHFTNRLKLFEEIEDEDSIEISDSSPSHL 144

Query: 62  TPGSLQNKVFGGSVDQLTPGKNQSP-ARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
            P SLQN+   GSVD++ PGK+ +P A QNLFNG SKLN +NWG+ G+   S+ ANS  N
Sbjct: 145 APSSLQNQALTGSVDKMMPGKSYTPPALQNLFNG-SKLNSINWGEGGNAHSSRIANSLDN 203

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXXX 180
             TRDIG+QFNAVEFKRSTEELKLR  + EE + KT ++KRKS     DGQ         
Sbjct: 204 RLTRDIGLQFNAVEFKRSTEELKLR-ASMEERMKKTTRKKRKS-----DGQDPSAEHEEE 257

Query: 181 XXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
             MR RFYESASARKRTVTAEERERAIN AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 258 VEMRLRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIM 312


>Glyma11g13210.2 
          Length = 404

 Score =  259 bits (661), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/236 (65%), Positives = 175/236 (74%), Gaps = 9/236 (3%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQS  RS NEG  FTN    F EME  DS E  DSSPS+L
Sbjct: 58  YEGKSSFNVHIFNLATSEINYQSVTRSSNEGLHFTNCLKFFEEMEGEDSIEISDSSPSHL 117

Query: 62  TPGSLQNKVFGGSVDQLTPGK--NQSPARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQG 119
           +P SLQN+   GSVD++ PGK  N  PA QNLFNG SKLN +NWG+ G+   S+ ANS  
Sbjct: 118 SPSSLQNQALAGSVDKMMPGKSYNTPPALQNLFNG-SKLNSINWGEGGNAHSSRSANSLD 176

Query: 120 NHSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXX 179
           N  TRDIG+QFNAVEFKRSTEELKLR  + EE + KT ++KRKS     DGQ        
Sbjct: 177 NRLTRDIGLQFNAVEFKRSTEELKLR-ASIEERMKKTTRKKRKS-----DGQEPSAGHEE 230

Query: 180 XXXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
              MR+RFYESASARKRTVTAEERER IN+AKAFEP+NPFCRVVLRPSYLYRGCIM
Sbjct: 231 EVEMRFRFYESASARKRTVTAEERERVINEAKAFEPSNPFCRVVLRPSYLYRGCIM 286


>Glyma11g13210.1 
          Length = 431

 Score =  258 bits (659), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/236 (65%), Positives = 175/236 (74%), Gaps = 9/236 (3%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQS  RS NEG  FTN    F EME  DS E  DSSPS+L
Sbjct: 85  YEGKSSFNVHIFNLATSEINYQSVTRSSNEGLHFTNCLKFFEEMEGEDSIEISDSSPSHL 144

Query: 62  TPGSLQNKVFGGSVDQLTPGK--NQSPARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQG 119
           +P SLQN+   GSVD++ PGK  N  PA QNLFNG SKLN +NWG+ G+   S+ ANS  
Sbjct: 145 SPSSLQNQALAGSVDKMMPGKSYNTPPALQNLFNG-SKLNSINWGEGGNAHSSRSANSLD 203

Query: 120 NHSTRDIGVQFNAVEFKRSTEELKLRYPNNEEGVSKTVKRKRKSEPKTVDGQXXXXXXXX 179
           N  TRDIG+QFNAVEFKRSTEELKLR  + EE + KT ++KRKS     DGQ        
Sbjct: 204 NRLTRDIGLQFNAVEFKRSTEELKLR-ASIEERMKKTTRKKRKS-----DGQEPSAGHEE 257

Query: 180 XXXMRYRFYESASARKRTVTAEERERAINDAKAFEPANPFCRVVLRPSYLYRGCIM 235
              MR+RFYESASARKRTVTAEERER IN+AKAFEP+NPFCRVVLRPSYLYRGCIM
Sbjct: 258 EVEMRFRFYESASARKRTVTAEERERVINEAKAFEPSNPFCRVVLRPSYLYRGCIM 313


>Glyma12g05250.4 
          Length = 251

 Score =  162 bits (409), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/145 (65%), Positives = 111/145 (76%), Gaps = 2/145 (1%)

Query: 2   YEGNSSFIVHIFNMSTSEVNYQSAVRSRNEGPVFTNYHHIFVEMEDTDSFEFMDSSPSNL 61
           YEG SSF VHIFN++TSE+NYQSA RS NEG  FTN   +F E+ED DS E  DSSPS+L
Sbjct: 85  YEGKSSFSVHIFNLATSEINYQSATRSSNEGLHFTNRLKLFEEIEDEDSIEISDSSPSHL 144

Query: 62  TPGSLQNKVFGGSVDQLTPGKNQSP-ARQNLFNGGSKLNRVNWGDSGSPFPSKDANSQGN 120
            P SLQN+   GSVD++ PGK+ +P A QNLFNG SKLN +NWG+ G+   S+ ANS  N
Sbjct: 145 APSSLQNQALTGSVDKMMPGKSYTPPALQNLFNG-SKLNSINWGEGGNAHSSRIANSLDN 203

Query: 121 HSTRDIGVQFNAVEFKRSTEELKLR 145
             TRDIG+QFNAVEFKRSTEELKLR
Sbjct: 204 RLTRDIGLQFNAVEFKRSTEELKLR 228