Miyakogusa Predicted Gene
- Lj0g3v0297489.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0297489.1 tr|G7KIE2|G7KIE2_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_6g042480 PE=4 SV=1,35.42,4e-16,seg,NULL;
F-box domain,F-box domain, cyclin-like; no
description,NULL,CUFF.19958.1
(362 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g26950.3 534 e-152
Glyma09g26950.2 534 e-152
Glyma09g26950.1 534 e-152
Glyma18g46130.1 321 1e-87
Glyma09g40070.2 320 2e-87
Glyma09g40070.1 320 2e-87
Glyma16g32240.2 143 3e-34
Glyma16g32240.1 142 4e-34
>Glyma09g26950.3
Length = 374
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/372 (73%), Positives = 303/372 (81%), Gaps = 11/372 (2%)
Query: 1 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMF 60
MSEVKN VDFIQLL PDMSIKIL HLDDPCDL+RVS VSSSWHRFVIE GLCK+LCL+MF
Sbjct: 1 MSEVKNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMF 60
Query: 61 PEISHVAHSIELGNMIEPVCNVLD---NWECLKRNHKVYAFLASGLTPTWKNCISEAISA 117
PEIS VAH +EL N+IEP+ N L NWE LKR H+VYAFLASGLTP KNCIS++ISA
Sbjct: 61 PEISGVAHIVELDNIIEPLINTLGSYVNWESLKRIHRVYAFLASGLTPMRKNCISKSISA 120
Query: 118 SSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQP 177
SSTDNYPEESI +TLEP DRT+ R YWSSKGES PSVPETL Y+L SKLCLVTEI+V P
Sbjct: 121 SSTDNYPEESILHTLEPGDRTQYRASYWSSKGESHPSVPETLVYKLASKLCLVTEIYVHP 180
Query: 178 FQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPM 237
FQAYFQHGFPIYSAKAVRFRMGHPR+PMELES V D MA N +LGD+QFIWTYTSPEFPM
Sbjct: 181 FQAYFQHGFPIYSAKAVRFRMGHPRHPMELESAV-DKMATNDVLGDNQFIWTYTSPEFPM 239
Query: 238 FQENRLQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIK 297
FQENRLQKFKLPEP RVQKQEMDELFYICISHVQ +G+ +SP FD+K
Sbjct: 240 FQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQAMGRSISPEFDVK 299
Query: 298 IHHPSGKCTLKYFPQTD-WCVPSTSSPTIESNNPSRLRS----LMQSGVRRWEQIILGAL 352
IHHPSGKCTLKY PQ D + STSS +S+NPSRLR+ +MQ GVRRWEQ +L AL
Sbjct: 300 IHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSAL 359
Query: 353 LGSGS--VAVDD 362
LG+ + V VD+
Sbjct: 360 LGTATDPVVVDN 371
>Glyma09g26950.2
Length = 374
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/372 (73%), Positives = 303/372 (81%), Gaps = 11/372 (2%)
Query: 1 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMF 60
MSEVKN VDFIQLL PDMSIKIL HLDDPCDL+RVS VSSSWHRFVIE GLCK+LCL+MF
Sbjct: 1 MSEVKNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMF 60
Query: 61 PEISHVAHSIELGNMIEPVCNVLD---NWECLKRNHKVYAFLASGLTPTWKNCISEAISA 117
PEIS VAH +EL N+IEP+ N L NWE LKR H+VYAFLASGLTP KNCIS++ISA
Sbjct: 61 PEISGVAHIVELDNIIEPLINTLGSYVNWESLKRIHRVYAFLASGLTPMRKNCISKSISA 120
Query: 118 SSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQP 177
SSTDNYPEESI +TLEP DRT+ R YWSSKGES PSVPETL Y+L SKLCLVTEI+V P
Sbjct: 121 SSTDNYPEESILHTLEPGDRTQYRASYWSSKGESHPSVPETLVYKLASKLCLVTEIYVHP 180
Query: 178 FQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPM 237
FQAYFQHGFPIYSAKAVRFRMGHPR+PMELES V D MA N +LGD+QFIWTYTSPEFPM
Sbjct: 181 FQAYFQHGFPIYSAKAVRFRMGHPRHPMELESAV-DKMATNDVLGDNQFIWTYTSPEFPM 239
Query: 238 FQENRLQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIK 297
FQENRLQKFKLPEP RVQKQEMDELFYICISHVQ +G+ +SP FD+K
Sbjct: 240 FQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQAMGRSISPEFDVK 299
Query: 298 IHHPSGKCTLKYFPQTD-WCVPSTSSPTIESNNPSRLRS----LMQSGVRRWEQIILGAL 352
IHHPSGKCTLKY PQ D + STSS +S+NPSRLR+ +MQ GVRRWEQ +L AL
Sbjct: 300 IHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSAL 359
Query: 353 LGSGS--VAVDD 362
LG+ + V VD+
Sbjct: 360 LGTATDPVVVDN 371
>Glyma09g26950.1
Length = 374
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/372 (73%), Positives = 303/372 (81%), Gaps = 11/372 (2%)
Query: 1 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMF 60
MSEVKN VDFIQLL PDMSIKIL HLDDPCDL+RVS VSSSWHRFVIE GLCK+LCL+MF
Sbjct: 1 MSEVKNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSAVSSSWHRFVIEQGLCKQLCLKMF 60
Query: 61 PEISHVAHSIELGNMIEPVCNVLD---NWECLKRNHKVYAFLASGLTPTWKNCISEAISA 117
PEIS VAH +EL N+IEP+ N L NWE LKR H+VYAFLASGLTP KNCIS++ISA
Sbjct: 61 PEISGVAHIVELDNIIEPLINTLGSYVNWESLKRIHRVYAFLASGLTPMRKNCISKSISA 120
Query: 118 SSTDNYPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQP 177
SSTDNYPEESI +TLEP DRT+ R YWSSKGES PSVPETL Y+L SKLCLVTEI+V P
Sbjct: 121 SSTDNYPEESILHTLEPGDRTQYRASYWSSKGESHPSVPETLVYKLASKLCLVTEIYVHP 180
Query: 178 FQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPM 237
FQAYFQHGFPIYSAKAVRFRMGHPR+PMELES V D MA N +LGD+QFIWTYTSPEFPM
Sbjct: 181 FQAYFQHGFPIYSAKAVRFRMGHPRHPMELESAV-DKMATNDVLGDNQFIWTYTSPEFPM 239
Query: 238 FQENRLQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIK 297
FQENRLQKFKLPEP RVQKQEMDELFYICISHVQ +G+ +SP FD+K
Sbjct: 240 FQENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQAMGRSISPEFDVK 299
Query: 298 IHHPSGKCTLKYFPQTD-WCVPSTSSPTIESNNPSRLRS----LMQSGVRRWEQIILGAL 352
IHHPSGKCTLKY PQ D + STSS +S+NPSRLR+ +MQ GVRRWEQ +L AL
Sbjct: 300 IHHPSGKCTLKYCPQIDCYVSSSTSSQRSDSSNPSRLRTITSNIMQRGVRRWEQFLLSAL 359
Query: 353 LGSGS--VAVDD 362
LG+ + V VD+
Sbjct: 360 LGTATDPVVVDN 371
>Glyma18g46130.1
Length = 364
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 215/346 (62%), Gaps = 25/346 (7%)
Query: 9 DFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAH 68
D + L+ D SIKIL LDD DLVR + VS SW VI NGLCK+LCLRMFP++S VA
Sbjct: 7 DVLSYLDSDTSIKILMSLDDLADLVRATCVSRSWRDIVIANGLCKQLCLRMFPQLSRVAF 66
Query: 69 SIELGN-----MIEPVCNVLDNWECLKRNHKVYAFLASGL-TPTWKNCISEAISASSTDN 122
+EL E + W L R H+V+A+L L + NCI++ + ASSTDN
Sbjct: 67 VVELNQNGAKEHAEVGSSYSMEWLSLLREHRVFAYLGRALMSSVAMNCIAKTVGASSTDN 126
Query: 123 YPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQPFQAYF 182
+P+ESI NTLEPRD R YWSS G+S+P+VPETL Y+L+S +C++TEI++QPFQA F
Sbjct: 127 FPQESIDNTLEPRDHINGRYYYWSSNGQSNPNVPETLTYELVSPICVITEINIQPFQADF 186
Query: 183 QHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQENR 242
Q G PIYSAK+VRF+MGHP+ SL A D D F+WTYTSPEFPM +ENR
Sbjct: 187 QIGSPIYSAKSVRFKMGHPK-----ASLDATD--------DEMFVWTYTSPEFPMSKENR 233
Query: 243 LQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPS 302
LQKFKLPEP R+Q+QEMD L YIC+SHVQV+G LSP F++ I PS
Sbjct: 234 LQKFKLPEPVLCIGGFLQIELLGRIQRQEMDGLLYICVSHVQVLGGSLSPPFNVDILQPS 293
Query: 303 GKCTLKYFPQTDWCVPSTSSPTIESNNPSRLRSLMQSGVRRWEQII 348
G LK D P + S N S+ S Q VR ++ I+
Sbjct: 294 GMFVLKRDQLAD------HQPVVTSGNESQEISAEQREVRDFQHIV 333
>Glyma09g40070.2
Length = 363
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 202/306 (66%), Gaps = 19/306 (6%)
Query: 9 DFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAH 68
D + L+ D S+KI LDD DLVRV+ VS SW FVI NGLCK+LCLRMFP++S VA
Sbjct: 7 DVLSCLDSDTSLKIFMCLDDLADLVRVTCVSRSWRHFVIANGLCKQLCLRMFPQLSRVAF 66
Query: 69 SIELGN-----MIEPVCNVLDNWECLKRNHKVYAFLASGL-TPTWKNCISEAISASSTDN 122
+EL E + W L R H+VYA+L L + NCI++ + ASSTDN
Sbjct: 67 VVELNQNGAKEHAEVGSSYSMEWLSLLREHRVYAYLGRALMSSVAMNCIAKTVGASSTDN 126
Query: 123 YPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQPFQAYF 182
+P+ESI NTLEPRD R YWSS G+S+P+VPETL Y+L+S++C++TEI++QPFQA F
Sbjct: 127 FPQESIDNTLEPRDYINGRYCYWSSDGQSNPNVPETLTYELVSQICVITEINIQPFQADF 186
Query: 183 QHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQENR 242
Q G PIYSAK+VRF+MGHP+ ++ VAD D F+WTY SPEFPM QENR
Sbjct: 187 QRGSPIYSAKSVRFKMGHPKASLD----VAD---------DEMFVWTYNSPEFPMSQENR 233
Query: 243 LQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPS 302
LQKFKLPEP RVQ+QEMD L YIC+SHVQV+G LSP F++ I PS
Sbjct: 234 LQKFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSHVQVLGSSLSPPFNVDILQPS 293
Query: 303 GKCTLK 308
G LK
Sbjct: 294 GMFVLK 299
>Glyma09g40070.1
Length = 363
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/306 (53%), Positives = 202/306 (66%), Gaps = 19/306 (6%)
Query: 9 DFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMFPEISHVAH 68
D + L+ D S+KI LDD DLVRV+ VS SW FVI NGLCK+LCLRMFP++S VA
Sbjct: 7 DVLSCLDSDTSLKIFMCLDDLADLVRVTCVSRSWRHFVIANGLCKQLCLRMFPQLSRVAF 66
Query: 69 SIELGN-----MIEPVCNVLDNWECLKRNHKVYAFLASGL-TPTWKNCISEAISASSTDN 122
+EL E + W L R H+VYA+L L + NCI++ + ASSTDN
Sbjct: 67 VVELNQNGAKEHAEVGSSYSMEWLSLLREHRVYAYLGRALMSSVAMNCIAKTVGASSTDN 126
Query: 123 YPEESIQNTLEPRDRTENRLLYWSSKGESDPSVPETLGYQLISKLCLVTEIHVQPFQAYF 182
+P+ESI NTLEPRD R YWSS G+S+P+VPETL Y+L+S++C++TEI++QPFQA F
Sbjct: 127 FPQESIDNTLEPRDYINGRYCYWSSDGQSNPNVPETLTYELVSQICVITEINIQPFQADF 186
Query: 183 QHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPEFPMFQENR 242
Q G PIYSAK+VRF+MGHP+ ++ VAD D F+WTY SPEFPM QENR
Sbjct: 187 QRGSPIYSAKSVRFKMGHPKASLD----VAD---------DEMFVWTYNSPEFPMSQENR 233
Query: 243 LQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIHHPS 302
LQKFKLPEP RVQ+QEMD L YIC+SHVQV+G LSP F++ I PS
Sbjct: 234 LQKFKLPEPVLCIGGILQIELLGRVQRQEMDGLLYICVSHVQVLGSSLSPPFNVDILQPS 293
Query: 303 GKCTLK 308
G LK
Sbjct: 294 GMFVLK 299
>Glyma16g32240.2
Length = 152
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%)
Query: 1 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMF 60
MSEV+N VDFIQLL PDMSIKIL HLDDPCDL+RVS VSSSWHRFVIE+GLCK+LCL+MF
Sbjct: 1 MSEVRNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMF 60
Query: 61 PEISHVAHSIELGNMIEPVCNVLDNWE 87
PEIS VAH IEL N+IEP+ N L ++E
Sbjct: 61 PEISGVAHIIELDNIIEPLSNTLGSYE 87
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 240 ENRLQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVV 286
ENRLQKFKLPEP RVQKQEMDELFYI +++++
Sbjct: 87 ENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYIWKVYLEIL 133
>Glyma16g32240.1
Length = 217
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 77/87 (88%)
Query: 1 MSEVKNNVDFIQLLEPDMSIKILNHLDDPCDLVRVSIVSSSWHRFVIENGLCKRLCLRMF 60
MSEV+N VDFIQLL PDMSIKIL HLDDPCDL+RVS VSSSWHRFVIE+GLCK+LCL+MF
Sbjct: 1 MSEVRNKVDFIQLLGPDMSIKILTHLDDPCDLIRVSSVSSSWHRFVIEHGLCKQLCLKMF 60
Query: 61 PEISHVAHSIELGNMIEPVCNVLDNWE 87
PEIS VAH IEL N+IEP+ N L ++E
Sbjct: 61 PEISGVAHIIELDNIIEPLSNTLGSYE 87
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 93/128 (72%), Gaps = 5/128 (3%)
Query: 240 ENRLQKFKLPEPXXXXXXXXXXXXXXRVQKQEMDELFYICISHVQVVGQPLSPAFDIKIH 299
ENRLQKFKLPEP RVQKQEMDELFYICISHVQV+G+ L P FD+KIH
Sbjct: 87 ENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDELFYICISHVQVMGRLLFPEFDVKIH 146
Query: 300 HPSGKCTLKYFPQTD-WCVPSTSSPTIESNNPSRLR----SLMQSGVRRWEQIILGALLG 354
H SGKCTLKY PQTD + TSSP S+NPSRLR S+MQ GVRRWEQ +LGALLG
Sbjct: 147 HWSGKCTLKYCPQTDCYMSSPTSSPRSNSSNPSRLRTITSSIMQRGVRRWEQFLLGALLG 206
Query: 355 SGSVAVDD 362
+G V VD+
Sbjct: 207 TGPVVVDN 214