Miyakogusa Predicted Gene
- Lj0g3v0296609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0296609.1 Non Chatacterized Hit- tr|K4BHJ8|K4BHJ8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.56,3e-19,zf-C3HC4_3,NULL; ZF_RING_2,Zinc finger, RING-type;
no description,Zinc finger, RING/FYVE/PHD-type; I,TC79563.path1.1
(100 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g19750.2 201 2e-52
Glyma11g19750.1 201 2e-52
Glyma12g08770.1 198 1e-51
Glyma13g39560.2 182 8e-47
Glyma13g39560.1 182 8e-47
Glyma12g30330.1 172 5e-44
Glyma10g34240.1 154 3e-38
Glyma20g33300.1 148 1e-36
Glyma09g05320.1 92 1e-19
Glyma15g16660.1 91 3e-19
Glyma15g11100.1 55 2e-08
Glyma07g38670.1 47 4e-06
Glyma13g27930.1 46 8e-06
>Glyma11g19750.2
Length = 860
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/100 (94%), Positives = 97/100 (97%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRSIRQEVSAALNRSAGSSG HDCESP+ KSKWECVRKGLCC+CCESNIDSLL
Sbjct: 761 MDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLL 820
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
YRCGHLCTCSKCANELLQ+ RKCPMCQAPVVEVIRAYSIQ
Sbjct: 821 YRCGHLCTCSKCANELLQSRRKCPMCQAPVVEVIRAYSIQ 860
>Glyma11g19750.1
Length = 860
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/100 (94%), Positives = 97/100 (97%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRSIRQEVSAALNRSAGSSG HDCESP+ KSKWECVRKGLCC+CCESNIDSLL
Sbjct: 761 MDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLL 820
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
YRCGHLCTCSKCANELLQ+ RKCPMCQAPVVEVIRAYSIQ
Sbjct: 821 YRCGHLCTCSKCANELLQSRRKCPMCQAPVVEVIRAYSIQ 860
>Glyma12g08770.1
Length = 816
Score = 198 bits (503), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/100 (93%), Positives = 96/100 (96%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRSIRQEVSAALNRSAGSSG HDCESP+ KSKWECVRKGLCC+CCESNIDSLL
Sbjct: 717 MDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLL 776
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
YRCGHLCTCSKCANELLQ+ R CPMCQAPVVEVIRAYSIQ
Sbjct: 777 YRCGHLCTCSKCANELLQSRRNCPMCQAPVVEVIRAYSIQ 816
>Glyma13g39560.2
Length = 821
Score = 182 bits (462), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/108 (82%), Positives = 93/108 (86%), Gaps = 8/108 (7%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSS--------GTHDCESPDGKSKWECVRKGLCCVCC 52
MDMQLELQRSIRQEVSAALNRS GSS G HD S D KSKWECVRKGLCC+CC
Sbjct: 714 MDMQLELQRSIRQEVSAALNRSTGSSDDQVEFITGIHDGVSTDDKSKWECVRKGLCCICC 773
Query: 53 ESNIDSLLYRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
ESNIDSLLYRCGH+CTCSKCAN+LLQ+ RKCPMCQAPVVEVIRAYSIQ
Sbjct: 774 ESNIDSLLYRCGHMCTCSKCANDLLQSRRKCPMCQAPVVEVIRAYSIQ 821
>Glyma13g39560.1
Length = 821
Score = 182 bits (462), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/108 (82%), Positives = 93/108 (86%), Gaps = 8/108 (7%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSS--------GTHDCESPDGKSKWECVRKGLCCVCC 52
MDMQLELQRSIRQEVSAALNRS GSS G HD S D KSKWECVRKGLCC+CC
Sbjct: 714 MDMQLELQRSIRQEVSAALNRSTGSSDDQVEFITGIHDGVSTDDKSKWECVRKGLCCICC 773
Query: 53 ESNIDSLLYRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
ESNIDSLLYRCGH+CTCSKCAN+LLQ+ RKCPMCQAPVVEVIRAYSIQ
Sbjct: 774 ESNIDSLLYRCGHMCTCSKCANDLLQSRRKCPMCQAPVVEVIRAYSIQ 821
>Glyma12g30330.1
Length = 722
Score = 172 bits (437), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 89/100 (89%), Gaps = 8/100 (8%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRSIRQEVSAALNRS GSS D KSKWECVRKGLCC+CCESNI+SLL
Sbjct: 631 MDMQLELQRSIRQEVSAALNRSTGSS--------DDKSKWECVRKGLCCICCESNINSLL 682
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ 100
YRCGH+CTCSKCAN+LLQ+ RKCPMCQAPVVEVIRAYSIQ
Sbjct: 683 YRCGHMCTCSKCANDLLQSRRKCPMCQAPVVEVIRAYSIQ 722
>Glyma10g34240.1
Length = 827
Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRS+RQEVSAALNRS G +G+ E+ D SKW V+KG CCVCC+++IDSLL
Sbjct: 729 MDMQLELQRSVRQEVSAALNRSGGENGS-SAETSDDGSKWGHVKKGTCCVCCDNHIDSLL 787
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSI 99
YRCGH+CTCSKCANEL++ G KCP+C+AP++EV+RAYSI
Sbjct: 788 YRCGHMCTCSKCANELIRGGGKCPLCRAPILEVVRAYSI 826
>Glyma20g33300.1
Length = 812
Score = 148 bits (373), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 83/99 (83%), Gaps = 5/99 (5%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
MDMQLELQRS+RQEVSAALNRS S E+ D SKW V+KG CCVCC+++IDSLL
Sbjct: 718 MDMQLELQRSVRQEVSAALNRSGLS-----AETSDDGSKWGHVKKGTCCVCCDNHIDSLL 772
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSI 99
YRCGH+CTCSKCANEL++ G KCP+C+AP+VEV+RAYSI
Sbjct: 773 YRCGHMCTCSKCANELIRGGGKCPLCRAPIVEVVRAYSI 811
>Glyma09g05320.1
Length = 883
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
++MQ+ELQ+SI+QEV A + T + + KS ++KG CC+C E +DS+L
Sbjct: 786 LEMQMELQQSIKQEVQTASVMQCKHTIT--VKKEEKKSNDTTLKKGNCCICYEMKVDSVL 843
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAY 97
YRCGH+CTC KCANEL N KCP+C+A +V+V+ Y
Sbjct: 844 YRCGHMCTCLKCANELQWNSGKCPICRAKIVDVVHVY 880
>Glyma15g16660.1
Length = 735
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 1 MDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVRKGLCCVCCESNIDSLL 60
M+MQ+ELQ+S++QEV + + KS +KG CC+C E +DS+L
Sbjct: 649 MEMQIELQQSMKQEVQT-------------VKKEEKKSNNRTPKKGNCCICYEMKVDSVL 695
Query: 61 YRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAY 97
YRCGH+CTC KCANEL N KCP+C+A + +V+R Y
Sbjct: 696 YRCGHMCTCLKCANELQWNSGKCPICRAKIEDVVRVY 732
>Glyma15g11100.1
Length = 373
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 24 GSSGTHDCESPD-GKSKWECVRKGLCCVCCESNIDSLLYRCGHLCTCSKCANELLQNGRK 82
G+S T D + D GK C +C D+ + C H+C CS+CAN L Q K
Sbjct: 302 GNSSTDDFDDNDPGKE---------CVICMTEPKDTAVLPCRHMCMCSECANALRQQSNK 352
Query: 83 CPMCQAPVVEVI 94
CP+C+ P+ E+I
Sbjct: 353 CPICRQPIEELI 364
>Glyma07g38670.1
Length = 336
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 48 CCVCCESNIDSLLYRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVI 94
C +C D+ + C H+C C CA L KCP+C+ P+ E+I
Sbjct: 281 CVICMTEPKDTAVLPCRHMCMCGDCAKALRLQSNKCPICRQPIEELI 327
>Glyma13g27930.1
Length = 371
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 48 CCVCCESNIDSLLYRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVI 94
C +C D+ + C H+C CS+CAN KCP+C+ + E+I
Sbjct: 316 CVICMTEPKDTAVLPCRHMCMCSECANAHRLQSNKCPICRQSIEELI 362