Miyakogusa Predicted Gene
- Lj0g3v0296579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0296579.1 Non Chatacterized Hit- tr|K3ZR41|K3ZR41_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si029071,30.17,2e-18,seg,NULL; coiled-coil,NULL,CUFF.19979.1
(389 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g19750.2 496 e-140
Glyma11g19750.1 496 e-140
Glyma12g08770.1 418 e-117
Glyma13g39560.2 382 e-106
Glyma13g39560.1 382 e-106
Glyma12g30330.1 235 5e-62
Glyma20g33300.1 119 8e-27
Glyma10g34240.1 99 1e-20
>Glyma11g19750.2
Length = 860
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/392 (66%), Positives = 304/392 (77%), Gaps = 4/392 (1%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLCGRQVMLDM 60
MSSQQRSVSSG+NREEPSAEIDTQ+ERVRDG +VNQ GQ E TRRGIRKLCGRQ MLDM
Sbjct: 190 MSSQQRSVSSGENREEPSAEIDTQIERVRDGLIVNQIGGQTEHTRRGIRKLCGRQAMLDM 249
Query: 61 LKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESELGF 120
LKKA LLDHR+VSQFP+RNRIQALLRGR LRNDR VD+NR SVAESELGF
Sbjct: 250 LKKAERERQREIHELLDHRAVSQFPYRNRIQALLRGRFLRNDRPVDNNRPLSVAESELGF 309
Query: 121 LRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSIHS 180
LRR+QTVSGLREGF +R++N+GCSQATSN SDTSSN++ DFN N Q G+SSSH+V S+HS
Sbjct: 310 LRRRQTVSGLREGFFARRENSGCSQATSNASDTSSNVEIDFNTNEQMGSSSSHIVPSVHS 369
Query: 181 EQSGPDNEGSNGLGISGGQNCFQVTGCENLDRQGSSALAED--RLQIEPVDWQPSFSVGV 238
E+S P++ GSNGLG+SG QN + T CENL Q S+A ++ L IE +D Q S S V
Sbjct: 370 EESDPNDRGSNGLGVSGSQNWVRGTTCENLHWQESTAQVDELQHLPIESLDCQSSLSADV 429
Query: 239 ERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIRXXXXXX 298
ER D+ QN +VM T+D ANE+T QSL+IEDSEH +N+EFSEVHNE SELGDI
Sbjct: 430 ERGDNTEQNLDVMPTEDNANEITQQSLRIEDSEHCNNEEFSEVHNEQSELGDINNSENYS 489
Query: 299 XXXXXXXXXXTVD-MNWIDESSALEGEQPEEVIQNEGSDWHQSNTEWRNSTDESVDDNQH 357
V+ +NW +ES ALEGEQPEEV +NEGS+W+Q+NTEWRNST+E+VDDN
Sbjct: 490 SNYNIHMEDNVVNGVNW-NESGALEGEQPEEVSENEGSEWYQNNTEWRNSTEENVDDNHL 548
Query: 358 SNTTNEWHENSLANEDGENSRLQEAPEGWQGD 389
SNT NEW ENSL NEDGENSRLQE+ E WQ D
Sbjct: 549 SNTPNEWPENSLGNEDGENSRLQESHEVWQED 580
>Glyma11g19750.1
Length = 860
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/392 (66%), Positives = 304/392 (77%), Gaps = 4/392 (1%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLCGRQVMLDM 60
MSSQQRSVSSG+NREEPSAEIDTQ+ERVRDG +VNQ GQ E TRRGIRKLCGRQ MLDM
Sbjct: 190 MSSQQRSVSSGENREEPSAEIDTQIERVRDGLIVNQIGGQTEHTRRGIRKLCGRQAMLDM 249
Query: 61 LKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESELGF 120
LKKA LLDHR+VSQFP+RNRIQALLRGR LRNDR VD+NR SVAESELGF
Sbjct: 250 LKKAERERQREIHELLDHRAVSQFPYRNRIQALLRGRFLRNDRPVDNNRPLSVAESELGF 309
Query: 121 LRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSIHS 180
LRR+QTVSGLREGF +R++N+GCSQATSN SDTSSN++ DFN N Q G+SSSH+V S+HS
Sbjct: 310 LRRRQTVSGLREGFFARRENSGCSQATSNASDTSSNVEIDFNTNEQMGSSSSHIVPSVHS 369
Query: 181 EQSGPDNEGSNGLGISGGQNCFQVTGCENLDRQGSSALAED--RLQIEPVDWQPSFSVGV 238
E+S P++ GSNGLG+SG QN + T CENL Q S+A ++ L IE +D Q S S V
Sbjct: 370 EESDPNDRGSNGLGVSGSQNWVRGTTCENLHWQESTAQVDELQHLPIESLDCQSSLSADV 429
Query: 239 ERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIRXXXXXX 298
ER D+ QN +VM T+D ANE+T QSL+IEDSEH +N+EFSEVHNE SELGDI
Sbjct: 430 ERGDNTEQNLDVMPTEDNANEITQQSLRIEDSEHCNNEEFSEVHNEQSELGDINNSENYS 489
Query: 299 XXXXXXXXXXTVD-MNWIDESSALEGEQPEEVIQNEGSDWHQSNTEWRNSTDESVDDNQH 357
V+ +NW +ES ALEGEQPEEV +NEGS+W+Q+NTEWRNST+E+VDDN
Sbjct: 490 SNYNIHMEDNVVNGVNW-NESGALEGEQPEEVSENEGSEWYQNNTEWRNSTEENVDDNHL 548
Query: 358 SNTTNEWHENSLANEDGENSRLQEAPEGWQGD 389
SNT NEW ENSL NEDGENSRLQE+ E WQ D
Sbjct: 549 SNTPNEWPENSLGNEDGENSRLQESHEVWQED 580
>Glyma12g08770.1
Length = 816
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/393 (60%), Positives = 270/393 (68%), Gaps = 45/393 (11%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLCGRQVMLDM 60
MSSQQRSVSSG+NREEPSAEID Q+ERVRDG VVNQ GQ E TRRGIRKLCGRQ MLDM
Sbjct: 186 MSSQQRSVSSGENREEPSAEIDMQIERVRDGLVVNQIGGQTEHTRRGIRKLCGRQAMLDM 245
Query: 61 LKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESELGF 120
LKKA LL+H++VSQFP+RNRIQALLRGR LRNDR VD+N+ SVAESELGF
Sbjct: 246 LKKAERERQREIQELLNHQAVSQFPYRNRIQALLRGRFLRNDRPVDNNKPLSVAESELGF 305
Query: 121 LRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSIHS 180
LRR+QTVSGLREGF RK+N+GCSQATSN +DTSSN++ DFN N Q G+SSSH+V +H
Sbjct: 306 LRRRQTVSGLREGFFCRKENSGCSQATSN-ADTSSNVEIDFNTNEQMGSSSSHIVPIVHP 364
Query: 181 EQSGPDNEGSNGLGISGGQNCFQVTGCENLDRQGSSALAEDRLQ---IEPVDWQPSFSVG 237
EQS P++ GSN LG+SG QNC + S D+LQ IE +D Q SFS
Sbjct: 365 EQSDPNHRGSNRLGVSGSQNCVR-----------ESTAQADQLQHLPIESLDCQSSFSAC 413
Query: 238 VERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIRXXXXX 297
VER D+ QN +VM T+D ANE+T QSL+IEDSEHS+NQEFSEVHNE SELG I
Sbjct: 414 VERGDNPEQNVDVMPTEDAANEITQQSLRIEDSEHSNNQEFSEVHNEPSELGGINNSQNN 473
Query: 298 XXXXXXXXXXXTV-DMNWIDESSALEGEQPEEVIQNEGSDWHQSNTEWRNSTDESVDDNQ 356
V D+NW +ES ALEGEQPEE+
Sbjct: 474 SSNYNIHMEDNVVDDVNW-NESGALEGEQPEEL--------------------------- 505
Query: 357 HSNTTNEWHENSLANEDGENSRLQEAPEGWQGD 389
SNT NEW +NSLANEDGENSRLQE+ E WQ D
Sbjct: 506 -SNTANEWPDNSLANEDGENSRLQESHEVWQED 537
>Glyma13g39560.2
Length = 821
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/394 (58%), Positives = 262/394 (66%), Gaps = 47/394 (11%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQ--IELTRRGIRKLCGRQVML 58
MSSQQR VSSG++REE S+EI TQ+E VRDGFVVNQ+EGQ E TRRGIRKL GRQV L
Sbjct: 184 MSSQQRGVSSGESREEQSSEIGTQIECVRDGFVVNQNEGQHQTEHTRRGIRKLRGRQVFL 243
Query: 59 DMLKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESEL 118
DMLKKA LL+HR VS FPHRNRIQALLRGR LRNDR++D+N+STS+AESEL
Sbjct: 244 DMLKKAEMERQREVQELLNHRVVSHFPHRNRIQALLRGRFLRNDRSIDNNKSTSIAESEL 303
Query: 119 GFLRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSI 178
G LR+KQTVSGLREGFV RKDN GCSQATSN SDTSS D D N +TGASSS V ++
Sbjct: 304 GLLRQKQTVSGLREGFVFRKDNFGCSQATSNTSDTSSEDDIDVNTIEETGASSSQAVPTV 363
Query: 179 HSEQSGPDNEGSNGLGISGGQNCFQVTGCENLDRQGSSALAEDRLQIEPVDWQPSFSVGV 238
HS+QS P+N S+GL ISG Q C Q T CENLDRQGSSA E R D + S S
Sbjct: 364 HSQQSEPNNRVSDGLEISGDQICSQGTICENLDRQGSSAHVETR------DLESSSSTRF 417
Query: 239 ERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIRXXXXXX 298
ER D G N + M T+D +N LT SLQIED++ + E SEVH E S+ I
Sbjct: 418 EREDGTGGNVDTMPTEDPSNGLTQPSLQIEDTDQGNMHELSEVHTEQSQRDLI------- 470
Query: 299 XXXXXXXXXXTVDMNWIDESSALEGEQPEEV-IQNEGSDWHQSNTEWRNSTDESVDDNQH 357
ES ALEGEQ EEV I+N+GS WHQ SVDDNQ
Sbjct: 471 ------------------ESIALEGEQQEEVIIENDGSVWHQ-----------SVDDNQL 501
Query: 358 SNTTNEWHENSLANEDGENSRL--QEAPEGWQGD 389
+TTNEW +N L EDGENSR+ QEAPE WQ D
Sbjct: 502 GSTTNEWPQNILGGEDGENSRMQEQEAPEVWQED 535
>Glyma13g39560.1
Length = 821
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/394 (58%), Positives = 262/394 (66%), Gaps = 47/394 (11%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQ--IELTRRGIRKLCGRQVML 58
MSSQQR VSSG++REE S+EI TQ+E VRDGFVVNQ+EGQ E TRRGIRKL GRQV L
Sbjct: 184 MSSQQRGVSSGESREEQSSEIGTQIECVRDGFVVNQNEGQHQTEHTRRGIRKLRGRQVFL 243
Query: 59 DMLKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESEL 118
DMLKKA LL+HR VS FPHRNRIQALLRGR LRNDR++D+N+STS+AESEL
Sbjct: 244 DMLKKAEMERQREVQELLNHRVVSHFPHRNRIQALLRGRFLRNDRSIDNNKSTSIAESEL 303
Query: 119 GFLRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSI 178
G LR+KQTVSGLREGFV RKDN GCSQATSN SDTSS D D N +TGASSS V ++
Sbjct: 304 GLLRQKQTVSGLREGFVFRKDNFGCSQATSNTSDTSSEDDIDVNTIEETGASSSQAVPTV 363
Query: 179 HSEQSGPDNEGSNGLGISGGQNCFQVTGCENLDRQGSSALAEDRLQIEPVDWQPSFSVGV 238
HS+QS P+N S+GL ISG Q C Q T CENLDRQGSSA E R D + S S
Sbjct: 364 HSQQSEPNNRVSDGLEISGDQICSQGTICENLDRQGSSAHVETR------DLESSSSTRF 417
Query: 239 ERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIRXXXXXX 298
ER D G N + M T+D +N LT SLQIED++ + E SEVH E S+ I
Sbjct: 418 EREDGTGGNVDTMPTEDPSNGLTQPSLQIEDTDQGNMHELSEVHTEQSQRDLI------- 470
Query: 299 XXXXXXXXXXTVDMNWIDESSALEGEQPEEV-IQNEGSDWHQSNTEWRNSTDESVDDNQH 357
ES ALEGEQ EEV I+N+GS WHQ SVDDNQ
Sbjct: 471 ------------------ESIALEGEQQEEVIIENDGSVWHQ-----------SVDDNQL 501
Query: 358 SNTTNEWHENSLANEDGENSRL--QEAPEGWQGD 389
+TTNEW +N L EDGENSR+ QEAPE WQ D
Sbjct: 502 GSTTNEWPQNILGGEDGENSRMQEQEAPEVWQED 535
>Glyma12g30330.1
Length = 722
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 144/196 (73%), Gaps = 9/196 (4%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQI--ELTRRGIRKLCGRQVML 58
MSS QR VSSG+NREE S+E TQ+E VRDGFVVNQ+EGQ E TRRGIRKL GRQV L
Sbjct: 183 MSSHQRGVSSGENREEQSSENGTQIECVRDGFVVNQNEGQCQTEHTRRGIRKLWGRQVFL 242
Query: 59 DMLKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESEL 118
DMLKKA LLDHR VS FPHRNRIQALLRGR LRNDR++D+NRSTS+AESEL
Sbjct: 243 DMLKKAEMERQREVQELLDHRVVSHFPHRNRIQALLRGRFLRNDRSIDNNRSTSIAESEL 302
Query: 119 GFLRRKQTVSGLR-------EGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASS 171
G LR+KQTVSGL FV RKDN GCS ATSN SDTSS D D N TGASS
Sbjct: 303 GLLRQKQTVSGLSYQCVFLPPCFVFRKDNFGCSHATSNTSDTSSENDIDVNTIEDTGASS 362
Query: 172 SHLVLSIHSEQSGPDN 187
S V ++HS+QS P+N
Sbjct: 363 SQAVPTVHSQQSEPNN 378
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 85/170 (50%), Gaps = 35/170 (20%)
Query: 223 LQIEPVDWQPSFSVGVERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVH 282
L + V P F V R D+ G + +T DT++E IED+ S +Q VH
Sbjct: 314 LSYQCVFLPPCF---VFRKDNFGCSHATSNTSDTSSENDIDVNTIEDTGASSSQAVPTVH 370
Query: 283 NETSELGDIRXXXXXXXXXXXXXXXXTVDMNWIDESSALEGEQPEEVI-QNEGSDWHQSN 341
++ SE + R D+N DES+ + EEVI +N+GSDWHQS
Sbjct: 371 SQQSEPNNRRG-----------------DIN-NDESNFSNHDDREEVIIENDGSDWHQS- 411
Query: 342 TEWRNSTDESVDDNQHSNTTNEWHENSLANEDGENSRL--QEAPEGWQGD 389
VDD Q S+TTNEW +N L +EDGENSR+ QE PE WQ D
Sbjct: 412 ----------VDDIQLSSTTNEWPQNILGSEDGENSRMQEQEVPEVWQED 451
>Glyma20g33300.1
Length = 812
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLCGRQVMLDM 60
M SQQRS S G R+ +E Q +R RD V + E Q E RR + +L GRQ ++D+
Sbjct: 296 MISQQRS-SRGSRRDAQVSE-GAQSDRARD-VVADNDESQPEHVRRDMLRLRGRQALVDL 352
Query: 61 LKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESELGF 120
L + LL+HR+VS F HRNRIQ+LLRGR LRN+R V+ R S+A SEL
Sbjct: 353 LVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQ 412
Query: 121 LRRKQTVSGLREGFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSIHS 180
LR++ TVSGLREGF SR +N QA ++ TS++ NA+ G S L I S
Sbjct: 413 LRQRHTVSGLREGFRSRLENIVLGQAGTSPDSTSNS-----NASETRGDGSQANSLQIRS 467
Query: 181 -EQSGPDNEGSN 191
E P N+G N
Sbjct: 468 LETDVPSNQGGN 479
>Glyma10g34240.1
Length = 827
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 1 MSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLCGRQVMLDM 60
M SQQR S G R+ +E Q +R R G V + E Q E RR + +L GRQ ++D+
Sbjct: 296 MISQQRG-SRGSRRDAQVSE-GAQADRAR-GLVADNDESQPEHVRRDMSRLRGRQALVDL 352
Query: 61 LKKAXXXXXXXXXXLLDHRSVSQFPHRNRIQALLRGRILRNDRAVDHNRSTSVAESELGF 120
L + LL+HR+VS F HRNRIQ+LLRGR LRN+R V+ R S+A SEL
Sbjct: 353 LVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPLSMAASELVQ 412
Query: 121 LRRKQTVSGL 130
LR++ TVSGL
Sbjct: 413 LRQRHTVSGL 422