Miyakogusa Predicted Gene

Lj0g3v0296239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296239.1 tr|Q20563|Q20563_CAEEL Protein TAF-11.1
OS=Caenorhabditis elegans GN=taf-11.1 PE=2
SV=1,40.16,3e-19,Histone-fold,Histone-fold; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,TAFII28-like protein; TAFII28,,CUFF.19850.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g00420.2                                                       263   1e-70
Glyma03g00420.1                                                       258   2e-69

>Glyma03g00420.2 
          Length = 155

 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/184 (74%), Positives = 144/184 (78%), Gaps = 31/184 (16%)

Query: 1   MKQSKDPFEAAFVESPPESPV--QAQEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNM 58
           MKQSKDPFEAAF ESPPESP   + +E+D                             NM
Sbjct: 1   MKQSKDPFEAAFEESPPESPTATETEEED-----------------------------NM 31

Query: 59  DVELTKLQPTGDPQKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI 118
           DVEL KL  TGDP KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI
Sbjct: 32  DVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI 91

Query: 119 TIPITIVVSGIAKMFVGEVVETARIVIKERKESGPIRPCHLREAYRRLKLEGKVFKRSVP 178
           ++P+TIVVSGIAKMFVGEVVETARIV+KERKESGPIRPCHLREAYRRLKLEGKVFKRS  
Sbjct: 92  SVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSS 151

Query: 179 RLFR 182
           RLFR
Sbjct: 152 RLFR 155


>Glyma03g00420.1 
          Length = 156

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 135/182 (74%), Positives = 140/182 (76%), Gaps = 26/182 (14%)

Query: 1   MKQSKDPFEAAFVESPPESPVQAQEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMDV 60
           MKQSKDPFEAAF ESPPESP   +                                NMDV
Sbjct: 1   MKQSKDPFEAAFEESPPESPTATET--------------------------EEEEDNMDV 34

Query: 61  ELTKLQPTGDPQKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKITI 120
           EL KL  TGDP KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI++
Sbjct: 35  ELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISV 94

Query: 121 PITIVVSGIAKMFVGEVVETARIVIKERKESGPIRPCHLREAYRRLKLEGKVFKRSVPRL 180
           P+TIVVSGIAKMFVGEVVETARIV+KERKESGPIRPCHLREAYRRLKLEGKVFKRS  RL
Sbjct: 95  PMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRL 154

Query: 181 FR 182
           FR
Sbjct: 155 FR 156