Miyakogusa Predicted Gene

Lj0g3v0296179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296179.1 Non Chatacterized Hit- tr|I1JZW9|I1JZW9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22997
PE,73.68,0.00000000006,seg,NULL,CUFF.19841.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g01810.1                                                        60   5e-10
Glyma17g10080.1                                                        51   3e-07

>Glyma05g01810.1 
          Length = 115

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 3  MARTTLDFSSTFQQPNPTAIIMXXXXXXXXXXTLHDHHHYSL---TTLSFITNIII 55
          MARTTLDFSSTFQ+P+PTAIIM            + HHHY L   T  SFITNIII
Sbjct: 1  MARTTLDFSSTFQRPHPTAIIMPSPSLPFSLIVHNHHHHYPLKAPTPYSFITNIII 56


>Glyma17g10080.1 
          Length = 119

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 48/111 (43%), Gaps = 20/111 (18%)

Query: 3   MARTTLDFSSTFQQPNPTAIIMXXXXXXXXXXTLHDHHHYSLTT---LSFITN------- 52
           M RTTLDFSSTFQ+P+PTAIIM            + HHHY L      SFI N       
Sbjct: 1   MTRTTLDFSSTFQRPHPTAIIMPSPSLPFSLTVHNHHHHYPLKAPIPYSFIRNIIIIIHQ 60

Query: 53  -----IIIDVXXXXXXXXXXPFSKQAQEQQVKE-----GKVVASLLMLVRK 93
                                 + QAQE+  +E      KV A+ LM +RK
Sbjct: 61  PFAPHAAASDDDHHLHHHKHHTTAQAQEEDDEEHSQGRSKVAAASLMRMRK 111