Miyakogusa Predicted Gene

Lj0g3v0296009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0296009.1 Non Chatacterized Hit- tr|F6GX70|F6GX70_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.79,0.0000000005,seg,NULL; DUF1713,Domain of unknown function
DUF1713, mitochondria,CUFF.19829.1
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g07320.1                                                        57   5e-09

>Glyma19g07320.1 
          Length = 119

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 67  VIFPSFPFGFDSKPDFASGFLSPVAEDPRLEGSETLWADSVXXXXXXXXXXXXXXXLRKR 126
           VIFPSFPFGF  KP F SGF     E+   + S TLWADSV               LRKR
Sbjct: 57  VIFPSFPFGFSPKPVFESGFRGAAEEEE--DSSGTLWADSVKKKRKKKMNKHKYQKLRKR 114

Query: 127 IRRQT 131
           +RRQT
Sbjct: 115 MRRQT 119