Miyakogusa Predicted Gene

Lj0g3v0294619.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294619.2 Non Chatacterized Hit- tr|I1KZ01|I1KZ01_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30298
PE,85.1,0,FAD/NAD(P)-binding domain,NULL; UBIH,Ubiquinone biosynthesis
hydroxylase, UbiH/UbiF/VisC/COQ6, conse,CUFF.19839.2
         (507 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45910.1                                                       903   0.0  
Glyma05g05160.1                                                       118   1e-26
Glyma02g27910.1                                                        79   1e-14

>Glyma08g45910.1 
          Length = 510

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/510 (85%), Positives = 464/510 (90%), Gaps = 3/510 (0%)

Query: 1   MNRVLKKTVSNVCALKITRKSFC-TEVVKVAGSTTGDPSNEHGKKQSISKSIPEYDIAIV 59
           MNRV+KKTVSN+CALK+ RKSFC TE VKVAG +  + SN+H KKQ+ISK IP+YDIAIV
Sbjct: 1   MNRVIKKTVSNICALKVPRKSFCSTEGVKVAGCSIPEVSNDHEKKQAISKVIPQYDIAIV 60

Query: 60  GGGMVGMALACFLASMPLTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFL 119
           GGGMVGMAL+CFLAS P+TKQLSVAIIDSNPALGSSL IKKEDPPDPRVSTVTPA+ISFL
Sbjct: 61  GGGMVGMALSCFLASNPMTKQLSVAIIDSNPALGSSLHIKKEDPPDPRVSTVTPASISFL 120

Query: 120 RDAGAWKYVEQNRHAYFNKMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCM 179
           +DAGAWKYVEQNR AYFN MQVWDYTG GY RY ARD NKDFLGCVAENKVLH ALLSC+
Sbjct: 121 QDAGAWKYVEQNRRAYFNTMQVWDYTGLGYARYHARDVNKDFLGCVAENKVLHNALLSCV 180

Query: 180 KDSDFKQTIYPLRLTSMTLNTNSMSVVEENTASKDPLSAQG--AKLQLSDGSSIYAKLVV 237
           KDSDFK TIYPLRL+SMTLNT+SMS+ EEN  SK+P SAQG  A+LQLSDGSSIYAKLVV
Sbjct: 181 KDSDFKTTIYPLRLSSMTLNTSSMSMAEENPTSKEPPSAQGHGAELQLSDGSSIYAKLVV 240

Query: 238 GADGGKSRVRDLAGFRTTGWNYSQNAIICTVEHASENQCAWQRFLPTGPIALLPMGDKFS 297
           GADGGKS VR+LAG +TTGWNYSQNAIICTVEH  EN+CAWQRFLPTGPIALLPMGDKFS
Sbjct: 241 GADGGKSHVRELAGIKTTGWNYSQNAIICTVEHTYENECAWQRFLPTGPIALLPMGDKFS 300

Query: 298 NIVWTMSPAESNNRKSITEEDFLKDVNSALDDGYGPRPTSSLLGTRDVLSWFRNDAALSA 357
           NIVWTMSP ESNNRKSITEE+FLKDVN ALD G+GP PTSSL GTRDV SWF+ DA LS 
Sbjct: 301 NIVWTMSPTESNNRKSITEEEFLKDVNYALDYGHGPHPTSSLSGTRDVFSWFKTDATLST 360

Query: 358 NEFFEIPPKVVRLASERMVFPLSLRHANSYASKRVVLIGDAAHTVHPLAGQGVNLGFGDA 417
           NEFFEIPPKV RLASERMVFPLSLRHANSYA KRVVLIGDAAHTVHPLAGQGVNLGFGDA
Sbjct: 361 NEFFEIPPKVTRLASERMVFPLSLRHANSYALKRVVLIGDAAHTVHPLAGQGVNLGFGDA 420

Query: 418 FSLSRTIAEGIALGSDIGEVNLLRKYEAERKPANIMMMAVLDGFQKAYSIDFGPFNFLRA 477
           FSLSR IAEGIALG+DIGEVN+L+KYEAERK ANIMMMA+LDG QKAYSIDFGPFN LRA
Sbjct: 421 FSLSRIIAEGIALGTDIGEVNMLKKYEAERKTANIMMMAILDGVQKAYSIDFGPFNILRA 480

Query: 478 AAFQGANYISPLKRSIISYASGDHKLPIFM 507
           AAF GANYISPLKRSIISYASG+HKLPIF 
Sbjct: 481 AAFHGANYISPLKRSIISYASGEHKLPIFF 510


>Glyma05g05160.1 
          Length = 221

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 29/146 (19%)

Query: 125 WKYVEQNRHAYFN---KMQVWDYTGFGYVRYDARDANKDFLGCVAENKVLHGALLSCMKD 181
           WK  +Q+R A  +   + QVW+YTG GY RY ARD NKDFLG        H +  +C   
Sbjct: 17  WKSKKQSRLARSSAKAEFQVWEYTGLGYPRYHARDVNKDFLG-------YHISAFTC--- 66

Query: 182 SDFKQTIYPLRLTSMTLNTNSMSVVEENTASKDPLSAQGAKLQLSDGSSIYAKLVVGADG 241
                    L +    LN+   ++ E + +        GAKLQLSDG+SIYAKLVVG DG
Sbjct: 67  ---------LSVIKYALNSKLANISERSLS-------HGAKLQLSDGNSIYAKLVVGTDG 110

Query: 242 GKSRVRDLAGFRTTGWNYSQNAIICT 267
           GKS VR+LA  +TT WN+SQNAIICT
Sbjct: 111 GKSHVRELARIKTTRWNHSQNAIICT 136


>Glyma02g27910.1 
          Length = 50

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 42/44 (95%)

Query: 77  LTKQLSVAIIDSNPALGSSLCIKKEDPPDPRVSTVTPATISFLR 120
           +TKQLSVAIIDSNPALGSSL IKKEDPPDPRVSTVT A+ISFL+
Sbjct: 1   MTKQLSVAIIDSNPALGSSLHIKKEDPPDPRVSTVTLASISFLQ 44