Miyakogusa Predicted Gene

Lj0g3v0294299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294299.1 Non Chatacterized Hit- tr|A5BST0|A5BST0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.24,2e-18,DUF4137,Putative sodium bile acid cotransporter; GB
DEF: HYPOTHETICAL PROTEIN F18O21_120,NULL; FAMIL,CUFF.19705.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g14310.1                                                       167   3e-42

>Glyma10g14310.1 
          Length = 426

 Score =  167 bits (422), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 96/115 (83%)

Query: 1   MVKPRVFLVAIXXXXXXXXXXXVFNSIAVWSLSIISGGRNSVFSRRENANALILVASQKT 60
           MVKP VFLVAI           VFN +AVW LS+ISGG+NS+FSR +NA+AL+LVASQKT
Sbjct: 312 MVKPSVFLVAIGLGTLLHLSLLVFNILAVWGLSVISGGKNSIFSREQNASALVLVASQKT 371

Query: 61  LPVMVAVIETLHGAFGESGLLVLPCIAAHLNQVIVDSFLVNFLRPRVDSNKVKVA 115
           LPVMVAVIE L GAFGESGLLVLPC+AAHLNQ+I+D+F+VNFLRP+ +SN VKVA
Sbjct: 372 LPVMVAVIEPLRGAFGESGLLVLPCVAAHLNQIILDTFIVNFLRPQDNSNNVKVA 426