Miyakogusa Predicted Gene
- Lj0g3v0293899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0293899.1 Non Chatacterized Hit- tr|I1L4A5|I1L4A5_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,65.62,0.000000000000001, ,CUFF.19674.1
(67 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g31330.1 87 3e-18
Glyma05g34780.1 65 2e-11
Glyma08g04900.1 65 2e-11
Glyma07g10490.1 62 1e-10
Glyma07g10600.1 55 2e-08
Glyma07g10460.1 53 9e-08
Glyma02g09750.1 46 8e-06
>Glyma09g31330.1
Length = 808
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Query: 4 CLFLLTCNLPQSHSQPAAPPVSNYSICNELSYNCGNLTGISYPFWGQNRPSHCGGGDMFN 63
CLF +T LPQS SQP P V NYS C E YNCG L+GI YPFWG+NRP HCGGG+ F
Sbjct: 14 CLFFIT--LPQSLSQP--PSVFNYSACKEWPYNCGTLSGIFYPFWGENRPPHCGGGEAFR 69
Query: 64 LTCH 67
L+CH
Sbjct: 70 LSCH 73
>Glyma05g34780.1
Length = 631
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 6/66 (9%)
Query: 1 MTLCLFLLTCNLPQSHSQPAAPPVSNYSICNELSYNCGNLTGISYPFWGQNRPSHCGGGD 60
+TL F LT LPQS+SQ +SIC++LS++CG L ISYPFWG NRP C G +
Sbjct: 30 LTLAFFFLTT-LPQSYSQKN----DTHSICSQLSFSCGTLRNISYPFWGGNRPQFC-GRN 83
Query: 61 MFNLTC 66
F LTC
Sbjct: 84 GFKLTC 89
>Glyma08g04900.1
Length = 618
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 1 MTLCLFLLTCNLPQSHSQPAAPPVSNYSICNELSYNCGNLTGISYPFWGQNRPSHCGGGD 60
+TL F LT +LPQS+SQ YSIC+++S++CG L ISYPFWG NRP C G +
Sbjct: 28 LTLAFFFLT-SLPQSYSQLQN---HTYSICSQISFSCGTLRNISYPFWGGNRPQFC-GRN 82
Query: 61 MFNLTC 66
F LTC
Sbjct: 83 GFKLTC 88
>Glyma07g10490.1
Length = 558
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 26 NYSICNELSYNCGNLTGISYPFWG-QNRPSHCGGGDMFNLTCH 67
NYS C E +Y CGNL ISYPFWG R S CGGGD+F L C+
Sbjct: 3 NYSECKEQTYKCGNLINISYPFWGNHQRDSECGGGDLFELKCY 45
>Glyma07g10600.1
Length = 248
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 35 YNCGNLTGISYPFWGQNRPSHCGGGDMFNLTCH 67
YNCGNL+ ISYPFWGQNR CG GD F L+C+
Sbjct: 1 YNCGNLSNISYPFWGQNRSPQCGSGDPFELSCN 33
>Glyma07g10460.1
Length = 601
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 32 ELSYNCGNLTGISYPFWGQNRPSHC-GGGDMFNLTCH 67
E YNCGNL+ I Y FWGQNRP C GGG F L CH
Sbjct: 1 ERPYNCGNLSDIFYSFWGQNRPLQCGGGGQTFELKCH 37
>Glyma02g09750.1
Length = 682
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 16 HSQPAAPPVSNYSICNELSYNCGNLTGISYPFWGQNRPSHCG 57
H + PP + S C+ S+NCG +T +SYPF G +RPS CG
Sbjct: 21 HHTTSLPPHAQLSTCHVTSFNCGTITNLSYPFTGGDRPSFCG 62